FFCP PHASE1:Hg19::chr2:159992598..159992618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85461 | |EntrezGene=85461 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29364 | |HGNC=29364 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-86bp_to_uc002uah.1_5end | |association_with_transcript=-86bp_to_uc002uah.1_5end | ||
|cluster_id=chr2:159992598..159992618,+ | |||
|description=CAGE_peak_6_at_TANC1_5end | |description=CAGE_peak_6_at_TANC1_5end | ||
|id=chr2:159992598..159992618,+ | |id=chr2:159992598..159992618,+ | ||
|ontology_enrichment_celltype=CL:0002592!2.63e-08!3;CL:0002494!5.23e-08!16 | |ontology_enrichment_celltype=CL:0002592!2.63e-08!3;CL:0002494!5.23e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0002592;1.39e-19;3!CL:0000222;2.56e-15;1!CL:0002494;1.81e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.39e-19,3;CL:0002494,1.88e-08,16 | |||
|ontology_enrichment_development_v019=UBERON:0004140;8.02e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.08e-29;2!DOID:178;1.44e-15;1!DOID:326;1.44e-15;1!DOID:3978;1.44e-15;1!DOID:3394;1.44e-15;1!DOID:5844;1.44e-15;1!DOID:8692;2.03e-15;31!DOID:1287;2.22e-15;4!DOID:8552;2.56e-15;1!DOID:1240;6.41e-09;39!DOID:1036;3.51e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.31e-30,2;DOID:8692,2.32e-16,31;DOID:178,1.34e-15,1;DOID:326,1.34e-15,1;DOID:3978,1.34e-15,1;DOID:3394,1.34e-15,1;DOID:5844,1.34e-15,1;DOID:8552,2.06e-15,1;DOID:1287,2.07e-15,4;DOID:1240,5.88e-13,39;DOID:2531,7.64e-10,51;DOID:0060083,7.64e-10,51;DOID:1036,3.63e-08,8 | |||
|ontology_enrichment_uberon=UBERON:0007100!4.50e-19!27;UBERON:0000948!7.16e-14!24;UBERON:0005498!7.16e-14!24;UBERON:0004140!7.16e-14!24;UBERON:0009881!7.16e-14!24;UBERON:0004141!7.16e-14!24;UBERON:0003084!7.16e-14!24;UBERON:0007005!7.16e-14!24;UBERON:0004139!7.16e-14!24;UBERON:0004291!7.16e-14!24;UBERON:0004872!2.84e-10!84;UBERON:0003103!2.51e-09!69;UBERON:0001009!2.79e-09!113;UBERON:0001621!2.63e-08!3;UBERON:0003498!3.00e-08!5;UBERON:0005985!3.00e-08!5;UBERON:0001637!2.07e-07!42;UBERON:0003509!2.07e-07!42;UBERON:0004572!2.07e-07!42;UBERON:0004573!2.44e-07!33;UBERON:0004571!2.44e-07!33;UBERON:0004535!4.23e-07!110;UBERON:0001981!7.78e-07!60;UBERON:0007500!7.78e-07!60;UBERON:0004537!7.78e-07!60;UBERON:0006965!7.78e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.49e-27;25!UBERON:0003498;1.39e-19;3!UBERON:0005985;1.39e-19;3!UBERON:0001621;1.39e-19;3!UBERON:0000948;5.47e-16;22!UBERON:0002146;2.56e-15;1!UBERON:0005623;2.56e-15;1!UBERON:0003103;5.93e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.90e-25,27;UBERON:0001621,1.39e-19,3;UBERON:0002146,2.75e-15,1;UBERON:0005623,2.75e-15,1;UBERON:0000948,1.21e-14,24;UBERON:0005498,1.21e-14,24;UBERON:0004140,1.21e-14,24;UBERON:0009881,1.21e-14,24;UBERON:0004141,1.21e-14,24;UBERON:0003084,1.21e-14,24;UBERON:0007005,1.21e-14,24;UBERON:0004139,1.21e-14,24;UBERON:0004291,1.21e-14,24;UBERON:0003498,3.75e-12,5;UBERON:0005985,3.75e-12,5;UBERON:0003103,1.05e-09,68 | |||
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| ||
|short_description=p6@TANC1 | |short_description=p6@TANC1 | ||
}} | }} |
Latest revision as of 18:30, 17 September 2015
Short description: | p6@TANC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TANC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -86bp_to_uc002uah.1_5end |
EntrezGene: | TANC1 |
HGNC: | 29364 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.39e-19 | 3 |
cardiocyte | 1.88e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.90e-25 | 27 |
coronary artery | 1.39e-19 | 3 |
pulmonary valve | 2.75e-15 | 1 |
semi-lunar valve | 2.75e-15 | 1 |
heart | 1.21e-14 | 24 |
primitive heart tube | 1.21e-14 | 24 |
primary heart field | 1.21e-14 | 24 |
anterior lateral plate mesoderm | 1.21e-14 | 24 |
heart tube | 1.21e-14 | 24 |
heart primordium | 1.21e-14 | 24 |
cardiac mesoderm | 1.21e-14 | 24 |
cardiogenic plate | 1.21e-14 | 24 |
heart rudiment | 1.21e-14 | 24 |
heart blood vessel | 3.75e-12 | 5 |
coronary vessel | 3.75e-12 | 5 |
compound organ | 1.05e-09 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.31e-30 | 2 |
myeloid leukemia | 2.32e-16 | 31 |
vascular disease | 1.34e-15 | 1 |
ischemia | 1.34e-15 | 1 |
extrinsic cardiomyopathy | 1.34e-15 | 1 |
myocardial ischemia | 1.34e-15 | 1 |
myocardial infarction | 1.34e-15 | 1 |
chronic myeloid leukemia | 2.06e-15 | 1 |
cardiovascular system disease | 2.07e-15 | 4 |
leukemia | 5.88e-13 | 39 |
hematologic cancer | 7.64e-10 | 51 |
immune system cancer | 7.64e-10 | 51 |
chronic leukemia | 3.63e-08 | 8 |