FFCP PHASE1:Hg19::chr11:8832521..8832563,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:8832521..8832563,-
|short_description=p5@ST5
|description=CAGE_peak_5_at_ST5_5end
|association_with_transcript=0bp_to_ENST00000530438_5end
|EntrezGene=67...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6764 | |EntrezGene=6764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11350 | |HGNC=11350 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000530438_5end | |||
|cluster_id=chr11:8832521..8832563,- | |||
|description=CAGE_peak_5_at_ST5_5end | |||
|id=chr11:8832521..8832563,- | |||
|ontology_enrichment_celltype=CL:0000057!3.45e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,5.76e-07,4;CL:0000731,5.76e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.28e-17!365;UBERON:0003102!1.29e-13!95;UBERON:0007023!1.76e-13!115;UBERON:0000153!3.40e-12!129;UBERON:0007811!3.40e-12!129;UBERON:0000033!2.27e-11!123;UBERON:0000468!4.18e-10!659;UBERON:0004121!8.20e-10!169;UBERON:0000161!1.04e-09!35;UBERON:0000481!1.85e-09!347;UBERON:0000924!5.30e-09!173;UBERON:0006601!5.30e-09!173;UBERON:0000467!5.51e-09!625;UBERON:0000480!7.38e-09!626;UBERON:0000062!1.79e-08!511;UBERON:0001444!7.87e-08!48;UBERON:0000165!2.85e-07!28;UBERON:0000930!2.85e-07!28;UBERON:0000166!4.24e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;2.32e-08;22!UBERON:0000079;2.32e-08;22!UBERON:0000365;1.02e-07;5!UBERON:0000486;1.86e-07;12!UBERON:0005904;6.37e-07;4!UBERON:0003135;9.88e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,9.95e-11,36;UBERON:0003102,5.56e-10,99;UBERON:0004119,2.32e-09,160;UBERON:0000925,2.32e-09,160;UBERON:0006595,2.32e-09,160;UBERON:0003101,2.03e-08,22;UBERON:0000079,2.03e-08,22;UBERON:0001007,4.69e-08,145;UBERON:0001555,4.69e-08,145;UBERON:0007026,4.69e-08,145;UBERON:0000365,7.12e-08,5;UBERON:0005904,5.41e-07,4;UBERON:0004122,6.68e-07,15;UBERON:0003135,8.57e-07,11 | |||
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| ||
|short_description=p5@ST5 | |||
}} | }} |
Latest revision as of 23:56, 24 September 2015
Short description: | p5@ST5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ST5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530438_5end |
EntrezGene: | ST5 |
HGNC: | 11350 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 5.76e-07 | 4 |
urothelial cell | 5.76e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
orifice | 9.95e-11 | 36 |
surface structure | 5.56e-10 | 99 |
endoderm-derived structure | 2.32e-09 | 160 |
endoderm | 2.32e-09 | 160 |
presumptive endoderm | 2.32e-09 | 160 |
male organism | 2.03e-08 | 22 |
male reproductive system | 2.03e-08 | 22 |
digestive system | 4.69e-08 | 145 |
digestive tract | 4.69e-08 | 145 |
primitive gut | 4.69e-08 | 145 |
urothelium | 7.12e-08 | 5 |
duct of male reproductive system | 5.41e-07 | 4 |
genitourinary system | 6.68e-07 | 15 |
male reproductive organ | 8.57e-07 | 11 |