FFCP PHASE1:Hg19::chr11:85780015..85780042,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:85780015..85780042,-
|short_description=p2@PICALM
|description=CAGE_peak_2_at_PICALM_5end
|association_with_transcript=0bp_to_ENST00000531558_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8301 | |EntrezGene=8301 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15514 | |HGNC=15514 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJT1 | |UniProt=E9PJT1 | ||
|association_with_transcript=0bp_to_ENST00000531558_5end | |||
|cluster_id=chr11:85780015..85780042,- | |||
|coexpression_cluster_id=C623 | |||
|description=CAGE_peak_2_at_PICALM_5end | |||
|id=chr11:85780015..85780042,- | |||
|ontology_enrichment_celltype=CL:0000766!2.58e-33!76;CL:0000557!4.50e-30!71;CL:0000839!1.17e-27!70;CL:0002009!3.84e-27!65;CL:0000763!6.38e-26!112;CL:0000049!6.38e-26!112;CL:0002194!6.47e-26!63;CL:0000576!6.47e-26!63;CL:0000040!6.47e-26!63;CL:0000559!6.47e-26!63;CL:0000860!4.93e-25!45;CL:0002057!1.37e-24!42;CL:0000738!3.23e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.75e-19;33!CL:0002057;7.75e-19;33!CL:0000473;8.98e-18;39!CL:0000234;8.98e-18;39!CL:0000576;3.42e-14;48!CL:0000766;6.79e-14;69!CL:0000763;2.27e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.12e-32,72;CL:0000557,3.69e-29,67;CL:0000839,1.00e-26,66;CL:0000473,1.01e-26,48;CL:0000234,1.01e-26,48;CL:0002009,3.07e-26,61;CL:0000763,5.06e-25,108;CL:0000049,5.06e-25,108;CL:0002194,5.18e-25,59;CL:0000576,5.18e-25,59;CL:0000040,5.18e-25,59;CL:0000559,5.18e-25,59;CL:0000860,1.26e-24,42;CL:0002057,1.26e-24,42 | |||
|ontology_enrichment_development_v019=CL:0002057;4.85e-18;42!CL:0000049;2.94e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.94e-28!115;UBERON:0002390!4.40e-24!102;UBERON:0003061!4.40e-24!102;UBERON:0002193!7.08e-24!112;UBERON:0002371!2.77e-23!80;UBERON:0003081!6.78e-23!216;UBERON:0001474!2.44e-22!86;UBERON:0004765!7.19e-17!101;UBERON:0001434!7.19e-17!101;UBERON:0002405!8.19e-16!115;UBERON:0002204!1.85e-14!167;UBERON:0001049!2.18e-12!57;UBERON:0005068!2.18e-12!57;UBERON:0006241!2.18e-12!57;UBERON:0007135!2.18e-12!57;UBERON:0002616!6.91e-11!59;UBERON:0000468!1.22e-10!659;UBERON:0003080!1.24e-10!42;UBERON:0002780!1.35e-10!41;UBERON:0001890!1.35e-10!41;UBERON:0006240!1.35e-10!41;UBERON:0000467!6.26e-10!625;UBERON:0000480!9.41e-10!626;UBERON:0001893!1.29e-09!34;UBERON:0002020!1.88e-09!34;UBERON:0003528!1.88e-09!34;UBERON:0000955!1.98e-09!69;UBERON:0006238!1.98e-09!69;UBERON:0002791!3.49e-09!33;UBERON:0001869!1.22e-08!32;UBERON:0001017!9.25e-08!82;UBERON:0003075!1.86e-07!86;UBERON:0007284!1.86e-07!86;UBERON:0001009!2.07e-07!113;UBERON:0000062!3.70e-07!511;UBERON:0005743!3.79e-07!86;UBERON:0004535!4.44e-07!110;UBERON:0002619!5.41e-07!22;UBERON:0000922!5.41e-07!612;UBERON:0000025!6.25e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.53e-08;34!UBERON:0003528;2.83e-08;34!UBERON:0002020;2.83e-08;34!UBERON:0007023;4.44e-08;114!UBERON:0001869;4.94e-08;32!UBERON:0002791;4.99e-08;32!UBERON:0002780;7.04e-08;41!UBERON:0001890;7.04e-08;41!UBERON:0002619;5.20e-07;22!UBERON:0000073;7.88e-07;53!UBERON:0002616;7.88e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.39e-28,114;UBERON:0003081,4.40e-24,203;UBERON:0002390,3.62e-23,98;UBERON:0003061,3.62e-23,98;UBERON:0002193,7.57e-23,108;UBERON:0002371,2.66e-22,76;UBERON:0001474,2.39e-21,82;UBERON:0002405,9.71e-20,93;UBERON:0004765,5.57e-18,90;UBERON:0001434,1.04e-14,100;UBERON:0000926,1.09e-12,315;UBERON:0004120,1.09e-12,315;UBERON:0006603,1.09e-12,315;UBERON:0002204,1.34e-12,167;UBERON:0001049,2.35e-12,56;UBERON:0005068,2.35e-12,56;UBERON:0006241,2.35e-12,56;UBERON:0007135,2.35e-12,56;UBERON:0000073,2.56e-11,53;UBERON:0002616,2.56e-11,53;UBERON:0002780,1.30e-10,41;UBERON:0001890,1.30e-10,41;UBERON:0003080,1.30e-10,41;UBERON:0006240,1.30e-10,41;UBERON:0001893,1.25e-09,34;UBERON:0003528,1.82e-09,34;UBERON:0002020,1.82e-09,34;UBERON:0000955,2.54e-09,68;UBERON:0006238,2.54e-09,68;UBERON:0002791,1.17e-08,32;UBERON:0001869,1.19e-08,32;UBERON:0003075,7.21e-08,82;UBERON:0007284,7.21e-08,82;UBERON:0001017,1.16e-07,81;UBERON:0000923,2.61e-07,560;UBERON:0010316,2.61e-07,560;UBERON:0005291,2.61e-07,560;UBERON:0006598,2.61e-07,560;UBERON:0010317,2.61e-07,560;UBERON:0002532,2.61e-07,560;UBERON:0002050,2.66e-07,564;UBERON:0001009,3.37e-07,112;UBERON:0002619,5.30e-07,22;UBERON:0000025,6.92e-07,192;UBERON:0004535,7.21e-07,109;UBERON:0000479,8.05e-07,773;UBERON:0005423,8.16e-07,581 | |||
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| ||
|short_description=p2@PICALM | |||
}} | }} |
Latest revision as of 21:45, 24 September 2015
Short description: | p2@PICALM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PICALM_5end |
Coexpression cluster: | C623_Dendritic_Neutrophils_Eosinophils_Whole_Macrophage_CD14_Basophils |
Association with transcript: | 0bp_to_ENST00000531558_5end |
EntrezGene: | PICALM |
HGNC: | 15514 |
UniProt: | E9PJT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.12e-32 | 72 |
granulocyte monocyte progenitor cell | 3.69e-29 | 67 |
myeloid lineage restricted progenitor cell | 1.00e-26 | 66 |
defensive cell | 1.01e-26 | 48 |
phagocyte | 1.01e-26 | 48 |
macrophage dendritic cell progenitor | 3.07e-26 | 61 |
myeloid cell | 5.06e-25 | 108 |
common myeloid progenitor | 5.06e-25 | 108 |
monopoietic cell | 5.18e-25 | 59 |
monocyte | 5.18e-25 | 59 |
monoblast | 5.18e-25 | 59 |
promonocyte | 5.18e-25 | 59 |
classical monocyte | 1.26e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.26e-24 | 42 |