FFCP PHASE1:Hg19::chr17:72744759..72744776,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9368 | |EntrezGene=9368 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11075 | |HGNC=11075 | ||
|TSSclassifier=strong | |||
|UniProt=O14745 | |UniProt=O14745 | ||
|association_with_transcript=0bp_to_ENST00000262613,NM_004252,uc002jln.1,uc002jlo.2_5end | |association_with_transcript=0bp_to_ENST00000262613,NM_004252,uc002jln.1,uc002jlo.2_5end | ||
|cluster_id=chr17:72744759..72744776,+ | |||
|description=CAGE_peak_1_at_SLC9A3R1_5end | |description=CAGE_peak_1_at_SLC9A3R1_5end | ||
|id=chr17:72744759..72744776,+ | |id=chr17:72744759..72744776,+ | ||
|ontology_enrichment_celltype=CL:0000037!7.89e-10!172;CL:0000566!7.89e-10!172;CL:0000988!2.06e-09!182;CL:0002032!5.95e-09!165;CL:0000837!5.95e-09!165;CL:0000738!7.92e-09!140;CL:0000084!5.47e-08!25;CL:0000827!5.47e-08!25;CL:0000860!1.83e-07!45;CL:0000791!2.08e-07!18;CL:0000789!2.08e-07!18;CL:0002420!2.08e-07!18;CL:0002419!2.08e-07!18;CL:0000790!2.08e-07!18;CL:0002087!5.83e-07!119;CL:0002057!7.42e-07!42 | |ontology_enrichment_celltype=CL:0000037!7.89e-10!172;CL:0000566!7.89e-10!172;CL:0000988!2.06e-09!182;CL:0002032!5.95e-09!165;CL:0000837!5.95e-09!165;CL:0000738!7.92e-09!140;CL:0000084!5.47e-08!25;CL:0000827!5.47e-08!25;CL:0000860!1.83e-07!45;CL:0000791!2.08e-07!18;CL:0000789!2.08e-07!18;CL:0002420!2.08e-07!18;CL:0002419!2.08e-07!18;CL:0000790!2.08e-07!18;CL:0002087!5.83e-07!119;CL:0002057!7.42e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.94e-08;25!CL:0000791;2.41e-07;18!CL:0000789;2.41e-07;18!CL:0002419;2.41e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.01e-09,168;CL:0000988,2.11e-09,177;CL:0002032,7.60e-09,161;CL:0000837,7.60e-09,161;CL:0000738,9.75e-09,136;CL:0000084,5.46e-08,25;CL:0000827,5.46e-08,25;CL:0000791,2.08e-07,18;CL:0000789,2.08e-07,18;CL:0002420,2.08e-07,18;CL:0002419,2.08e-07,18;CL:0000790,2.08e-07,18;CL:0002087,7.25e-07,115;CL:0000860,7.41e-07,42;CL:0002057,7.41e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;2.41e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.54e-10!115;UBERON:0000153!3.18e-09!129;UBERON:0007811!3.18e-09!129;UBERON:0000033!4.73e-08!123;UBERON:0001049!3.70e-07!57;UBERON:0005068!3.70e-07!57;UBERON:0006241!3.70e-07!57;UBERON:0007135!3.70e-07!57;UBERON:0005743!4.88e-07!86;UBERON:0002616!9.65e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.56e-10,114;UBERON:0011216,3.27e-07,223;UBERON:0001049,6.27e-07,56;UBERON:0005068,6.27e-07,56;UBERON:0006241,6.27e-07,56;UBERON:0007135,6.27e-07,56 | |||
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| ||
|short_description=p1@SLC9A3R1 | |short_description=p1@SLC9A3R1 | ||
}} | }} |
Latest revision as of 08:49, 17 September 2015
Short description: | p1@SLC9A3R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC9A3R1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262613, NM_004252, uc002jln.1, uc002jlo.2_5end |
EntrezGene: | SLC9A3R1 |
HGNC: | 11075 |
UniProt: | O14745 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.01e-09 | 168 |
hematopoietic cell | 2.11e-09 | 177 |
hematopoietic oligopotent progenitor cell | 7.60e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.60e-09 | 161 |
leukocyte | 9.75e-09 | 136 |
T cell | 5.46e-08 | 25 |
pro-T cell | 5.46e-08 | 25 |
mature alpha-beta T cell | 2.08e-07 | 18 |
alpha-beta T cell | 2.08e-07 | 18 |
immature T cell | 2.08e-07 | 18 |
mature T cell | 2.08e-07 | 18 |
immature alpha-beta T cell | 2.08e-07 | 18 |
nongranular leukocyte | 7.25e-07 | 115 |
classical monocyte | 7.41e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.41e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.56e-10 | 114 |
organ system subdivision | 3.27e-07 | 223 |
neural tube | 6.27e-07 | 56 |
neural rod | 6.27e-07 | 56 |
future spinal cord | 6.27e-07 | 56 |
neural keel | 6.27e-07 | 56 |