FFCP PHASE1:Hg19::chr2:130737223..130737244,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=150786,84084 | |EntrezGene=150786,84084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16525 | |HGNC=16525 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0N0 | |UniProt=Q9H0N0 | ||
|association_with_transcript=0bp_to_ENST00000410061,NM_032144,uc002tpx.1_5end | |association_with_transcript=0bp_to_ENST00000410061,NM_032144,uc002tpx.1_5end | ||
|cluster_id=chr2:130737223..130737244,+ | |||
|coexpression_cluster_id=C1019 | |||
|description=CAGE_peak_1_at_RAB6C_5end | |description=CAGE_peak_1_at_RAB6C_5end | ||
|id=chr2:130737223..130737244,+ | |id=chr2:130737223..130737244,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.76e-29!42;CL:0000860!4.98e-26!45;CL:0000557!1.12e-22!71;CL:0000839!8.31e-22!70;CL:0002009!6.69e-20!65;CL:0000766!9.18e-20!76;CL:0000763!4.80e-19!112;CL:0000049!4.80e-19!112;CL:0002194!1.76e-18!63;CL:0000576!1.76e-18!63;CL:0000040!1.76e-18!63;CL:0000559!1.76e-18!63;CL:0000738!2.42e-18!140;CL:0002031!5.41e-18!124;CL:0000037!6.31e-17!172;CL:0000566!6.31e-17!172;CL:0002032!1.21e-16!165;CL:0000837!1.21e-16!165;CL:0000988!8.27e-15!182;CL:0002087!4.13e-13!119;CL:0000197!1.16e-07!6;CL:0000098!1.16e-07!6;CL:0002167!1.16e-07!6 | |ontology_enrichment_celltype=CL:0002057!7.76e-29!42;CL:0000860!4.98e-26!45;CL:0000557!1.12e-22!71;CL:0000839!8.31e-22!70;CL:0002009!6.69e-20!65;CL:0000766!9.18e-20!76;CL:0000763!4.80e-19!112;CL:0000049!4.80e-19!112;CL:0002194!1.76e-18!63;CL:0000576!1.76e-18!63;CL:0000040!1.76e-18!63;CL:0000559!1.76e-18!63;CL:0000738!2.42e-18!140;CL:0002031!5.41e-18!124;CL:0000037!6.31e-17!172;CL:0000566!6.31e-17!172;CL:0002032!1.21e-16!165;CL:0000837!1.21e-16!165;CL:0000988!8.27e-15!182;CL:0002087!4.13e-13!119;CL:0000197!1.16e-07!6;CL:0000098!1.16e-07!6;CL:0002167!1.16e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.60e-24;33!CL:0002057;7.60e-24;33!CL:0000473;9.91e-20;39!CL:0000234;9.91e-20;39!CL:0000576;4.54e-15;48!CL:0000766;7.04e-11;69!CL:0000197;5.70e-08;6!CL:0000098;5.70e-08;6!CL:0002167;5.70e-08;6!CL:0000453;8.82e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.26e-28,48;CL:0000234,7.26e-28,48;CL:0000860,5.14e-27,42;CL:0002057,5.14e-27,42;CL:0000557,1.84e-24,67;CL:0000839,1.71e-23,66;CL:0002009,2.29e-21,61;CL:0000766,2.43e-20,72;CL:0000763,3.71e-20,108;CL:0000049,3.71e-20,108;CL:0002194,8.62e-20,59;CL:0000576,8.62e-20,59;CL:0000040,8.62e-20,59;CL:0000559,8.62e-20,59;CL:0002031,3.28e-14,120;CL:0000738,1.00e-13,136;CL:0002032,2.29e-13,161;CL:0000837,2.29e-13,161;CL:0000037,1.08e-12,168;CL:0000988,3.40e-11,177;CL:0002087,1.03e-09,115;CL:0000197,2.89e-08,6;CL:0000098,2.89e-08,6;CL:0002167,2.89e-08,6;CL:0000453,9.86e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.65e-19;42!CL:0000049;1.86e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.31e-20!80;UBERON:0001474!4.28e-18!86;UBERON:0004765!4.96e-16!101;UBERON:0001434!4.96e-16!101;UBERON:0002390!1.20e-13!102;UBERON:0003061!1.20e-13!102;UBERON:0002193!1.64e-12!112;UBERON:0002405!8.31e-12!115;UBERON:0002204!2.04e-09!167;UBERON:0001737!3.27e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.36e-10;9!UBERON:0001557;5.36e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.45e-21,76;UBERON:0004765,3.10e-19,90;UBERON:0001474,9.26e-19,82;UBERON:0002405,1.55e-17,93;UBERON:0001434,7.18e-16,100;UBERON:0002390,2.91e-14,98;UBERON:0003061,2.91e-14,98;UBERON:0002193,3.53e-13,108;UBERON:0001737,5.72e-10,9;UBERON:0002204,7.57e-10,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0679017574213,6.62963980826375,6.57279081348636,6.8310591830671,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,2.47705797305722,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,2.76256653681173,2.26725566213286,5.57943340731977,2.09186133215116,4.93401465626191,3.09706370895104,2.58923153089935,0.768482119587302,2.83778675866302,0.689491361473237,4.51839278508678,4.06279459783025,3.01187743268168,5.18521685109907,5.8428105955722,3.36692281607993,5.1348644332175,3.83602275479425,2.30895910130701,3.19141852194611,3.83602275479425,1.7412554317715,3.40431134814684,2.4912889959823,2.00998932205395,4.17186334736161,2.38907729175628,3.63239701580021,5.15588690382591,2.53169909952708,2.95757400836718,5.10250319916104,4.40283155567589,3.81917345898083,5.40636814229423,4.66104201421532,0.855038231223746,4.77400025277816,6.75857368929146,1.75996244461323,0.546138611262131,1.77901850772711,1.28019066769952,1.20118796110804,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0,1.32171328579026,2.80254281490768,1.05353633910031,0,0,0,3.51091640320424,0.32592226663359,0.473447805734733,3.89653456815823,3.89936599098108,5.30290633454707,4.65221178625604,3.79125409271022,3.0741916734162,1.8208308658383,2.79544437826249,2.76350017785848,1.73881851441031,1.33457906845854,2.67540828089713,2.09071047609954,3.17266159553185,1.53288197440768,0.34362744548263,2.53019692019503,0.318565414324097,1.30216690771284,1.90090408889675,0.903450714466637,0.895906278080929,0,0,1.64225599384209,0,0,0,0,0,6.26526553033299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16395805171553,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72573730275545,0,0,0,8.72888706821584,0,0,0,0,0,0,0,0,0,0,5.80337957013945,6.56959246336494,0,0,0,0,0,2.48444280083672,3.70886318171824,4.57920956778616,2.86764329104224,6.31850387867978,4.03360052488864,3.91010793664477,5.101758093259,4.61696588335668,0,0,0,0,0,0,0,0,0,8.92152613552333,0,0,0,0,0,0,0,6.4921026786043,6.92711295991348,0,1.38895653772983,3.80508304469197,0,0,0,0,0,2.81201501960331,10.5828740765282,10.7749073904214,0,0,0,0,3.96217953059517,3.10992173311158,3.02651902175619,2.65109110195398,4.76234207191268,0,0,0,0,3.00343057843917,5.43070221998099,0,0,0,0,0,4.22651376278,0,0,0,0,0,0,0,0,0,0,0,0,3.48613383440118,0,4.86495122564762,11.5519131029389,14.7583757638122,0,0,4.27910715122155,0,0,0,0,0,0,0,0,0,0,0,3.82763250991898,0,0,0,0,0,0,3.95144636908534,3.92543775353756,3.94256037584837,5.97421216462837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,6.29194090481056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19259876645935,2.61435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14631189969671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24715801637306,0,0,0,4.15892921391749,5.69844437876103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1490322207942,0,3.89546328329467,0,0,0,5.01268954180134,2.87796022262726,0,0,0,0,0,0,0,0,0,0,2.97501246323581,0,0,0,0,0,0,0,5.49112314896687,2.96964680832639,0,30.8185770807552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0009485034844,0,9.15490417902499,0,0,0,0,0,0,0,0,0,0,6.69902435437031,6.22863635132664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6151303935524,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6759719350419,0,3.21506296930038,3.02586760513914,3.32352270423348,3.14963448172101,4.6428117273477,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,6.85199668716218,0,0,0,0,0,0,0,0,0,0,1.08803560673895,2.0055191521816,2.45076461410769,0.983617892129413,0,33.6705908387455,12.0806002252944,0,22.3629586319128,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,9.7879234375619,0,0,0,0,0,6.74704668245407,0,8.29412415681711,0,10.4349012362347,0,9.13932509205109,0,0,0,5.10437135866343,8.75810955136955,0,4.8075398725591,5.72474130902062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26122833866349,6.64324201566815,4.57983103916364,0,0,0,0,0,0,0,0,11.6099991407139,11.1973906805935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8411098446521,0,0,0,0,0,9.99385941814081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.2431239445539,0,0,0,0,0,0,0,10.1783348816874,0,6.67662164660295,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27350855629344,5.7332336338646,0,0,0,5.17943069750316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53355240806901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.7042526232222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p1@RAB6C | |short_description=p1@RAB6C | ||
}} | }} |
Latest revision as of 22:28, 16 September 2015
Short description: | p1@RAB6C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB6C_5end |
Coexpression cluster: | C1019_occipital_medial_amygdala_caudate_hippocampus_cerebellum_parietal |
Association with transcript: | 0bp_to_ENST00000410061, NM_032144, uc002tpx.1_5end |
EntrezGene: | 150786,84084 |
HGNC: | 16525 |
UniProt: | Q9H0N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.26e-28 | 48 |
phagocyte | 7.26e-28 | 48 |
classical monocyte | 5.14e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.14e-27 | 42 |
granulocyte monocyte progenitor cell | 1.84e-24 | 67 |
myeloid lineage restricted progenitor cell | 1.71e-23 | 66 |
macrophage dendritic cell progenitor | 2.29e-21 | 61 |
myeloid leukocyte | 2.43e-20 | 72 |
myeloid cell | 3.71e-20 | 108 |
common myeloid progenitor | 3.71e-20 | 108 |
monopoietic cell | 8.62e-20 | 59 |
monocyte | 8.62e-20 | 59 |
monoblast | 8.62e-20 | 59 |
promonocyte | 8.62e-20 | 59 |
hematopoietic lineage restricted progenitor cell | 3.28e-14 | 120 |
leukocyte | 1.00e-13 | 136 |
hematopoietic oligopotent progenitor cell | 2.29e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.29e-13 | 161 |
hematopoietic stem cell | 1.08e-12 | 168 |
hematopoietic cell | 3.40e-11 | 177 |
nongranular leukocyte | 1.03e-09 | 115 |
receptor cell | 2.89e-08 | 6 |
sensory epithelial cell | 2.89e-08 | 6 |
olfactory epithelial cell | 2.89e-08 | 6 |
Langerhans cell | 9.86e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.45e-21 | 76 |
skeletal element | 3.10e-19 | 90 |
bone element | 9.26e-19 | 82 |
immune system | 1.55e-17 | 93 |
skeletal system | 7.18e-16 | 100 |
hematopoietic system | 2.91e-14 | 98 |
blood island | 2.91e-14 | 98 |
hemolymphoid system | 3.53e-13 | 108 |
larynx | 5.72e-10 | 9 |
musculoskeletal system | 7.57e-10 | 167 |