FFCP PHASE1:Hg19::chr2:128433309..128433346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55679 | |EntrezGene=55679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16084 | |HGNC=16084 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6E6 | |UniProt=F5H6E6 | ||
|association_with_transcript=32bp_to_ENST00000544917_5end | |association_with_transcript=32bp_to_ENST00000544917_5end | ||
|cluster_id=chr2:128433309..128433346,- | |||
|description=CAGE_peak_4_at_LIMS2_5end | |description=CAGE_peak_4_at_LIMS2_5end | ||
|id=chr2:128433309..128433346,- | |id=chr2:128433309..128433346,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.14e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.27e-42!115;UBERON:0001049!1.58e-20!57;UBERON:0005068!1.58e-20!57;UBERON:0006241!1.58e-20!57;UBERON:0007135!1.58e-20!57;UBERON:0000955!1.87e-18!69;UBERON:0006238!1.87e-18!69;UBERON:0001017!9.36e-18!82;UBERON:0002616!2.59e-17!59;UBERON:0003080!5.25e-17!42;UBERON:0005743!6.48e-17!86;UBERON:0002780!2.23e-16!41;UBERON:0001890!2.23e-16!41;UBERON:0006240!2.23e-16!41;UBERON:0003075!4.61e-16!86;UBERON:0007284!4.61e-16!86;UBERON:0002346!2.26e-15!90;UBERON:0000073!4.22e-15!94;UBERON:0001016!4.22e-15!94;UBERON:0002020!1.32e-14!34;UBERON:0003528!1.32e-14!34;UBERON:0001893!1.42e-14!34;UBERON:0002791!4.28e-14!33;UBERON:0001869!1.18e-13!32;UBERON:0002619!1.28e-11!22;UBERON:0001950!1.27e-10!20;UBERON:0004111!2.15e-10!241;UBERON:0003056!4.59e-10!61;UBERON:0000956!5.80e-10!25;UBERON:0000203!5.80e-10!25;UBERON:0000468!9.58e-10!659;UBERON:0000062!2.17e-09!511;UBERON:0000025!2.20e-09!194;UBERON:0000477!3.79e-09!286;UBERON:0000153!2.83e-08!129;UBERON:0007811!2.83e-08!129;UBERON:0000033!3.01e-08!123;UBERON:0000467!1.50e-07!625;UBERON:0000480!1.98e-07!626;UBERON:0004121!6.36e-07!169;UBERON:0000475!7.16e-07!365;UBERON:0000924!9.08e-07!173;UBERON:0006601!9.08e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.04e-14;34!UBERON:0002020;1.04e-14;34!UBERON:0001893;1.93e-14;34!UBERON:0002791;2.62e-14;32!UBERON:0001869;4.20e-14;32!UBERON:0002780;1.15e-13;41!UBERON:0001890;1.15e-13;41!UBERON:0007023;2.38e-13;114!UBERON:0002619;4.01e-13;22!UBERON:0000073;8.30e-12;53!UBERON:0002616;8.30e-12;53!UBERON:0001950;1.19e-11;20!UBERON:0000956;6.25e-11;25!UBERON:0000203;6.25e-11;25!UBERON:0001017;7.89e-10;75!UBERON:0000955;8.08e-10;68!UBERON:0002420;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9!UBERON:0001016;1.40e-08;83!UBERON:0000125;2.07e-08;9!UBERON:0002308;2.07e-08;9!UBERON:0003688;3.16e-07;6!UBERON:0002358;3.16e-07;6!UBERON:0003684;3.16e-07;6!UBERON:0001178;3.16e-07;6!UBERON:0009663;5.77e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.56e-49,114;UBERON:0001049,2.40e-23,56;UBERON:0005068,2.40e-23,56;UBERON:0006241,2.40e-23,56;UBERON:0007135,2.40e-23,56;UBERON:0000073,4.27e-21,53;UBERON:0002616,4.27e-21,53;UBERON:0000955,9.96e-21,68;UBERON:0006238,9.96e-21,68;UBERON:0001017,2.19e-20,81;UBERON:0002780,2.45e-19,41;UBERON:0001890,2.45e-19,41;UBERON:0003080,2.45e-19,41;UBERON:0006240,2.45e-19,41;UBERON:0001016,1.12e-18,89;UBERON:0003075,6.95e-18,82;UBERON:0007284,6.95e-18,82;UBERON:0003528,2.92e-17,34;UBERON:0002020,2.92e-17,34;UBERON:0001893,3.24e-17,34;UBERON:0002346,2.30e-16,86;UBERON:0001869,7.02e-16,32;UBERON:0002791,8.45e-16,32;UBERON:0002619,8.60e-13,22;UBERON:0003056,1.95e-12,61;UBERON:0001950,2.38e-11,20;UBERON:0010371,4.12e-11,104;UBERON:0011216,5.49e-11,223;UBERON:0000956,1.19e-10,25;UBERON:0000203,1.19e-10,25;UBERON:0010314,5.90e-10,132;UBERON:0002420,7.60e-09,9;UBERON:0007245,7.60e-09,9;UBERON:0010009,7.60e-09,9;UBERON:0010011,7.60e-09,9;UBERON:0000454,7.60e-09,9;UBERON:0004111,8.59e-09,240;UBERON:0000125,1.11e-08,9;UBERON:0002308,1.11e-08,9;UBERON:0000025,3.63e-08,192;UBERON:0004121,5.93e-08,171;UBERON:0000924,5.93e-08,171;UBERON:0006601,5.93e-08,171;UBERON:0009663,3.63e-07,7;UBERON:0003688,4.45e-07,6;UBERON:0002358,4.45e-07,6;UBERON:0003684,4.45e-07,6;UBERON:0001178,4.45e-07,6 | |||
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| ||
|short_description=p4@LIMS2 | |short_description=p4@LIMS2 | ||
}} | }} |
Latest revision as of 21:12, 16 September 2015
Short description: | p4@LIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000544917_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | F5H6E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data