FFCP PHASE1:Hg19::chr2:122247959..122247960,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23332 | |EntrezGene=23332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17088 | |HGNC=17088 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2E2 | |UniProt=F5H2E2 | ||
|association_with_transcript=-55bp_to_ENST00000430234,ENST00000545861,uc010yyw.1_5end | |association_with_transcript=-55bp_to_ENST00000430234,ENST00000545861,uc010yyw.1_5end | ||
|cluster_id=chr2:122247959..122247960,- | |||
|coexpression_cluster_id=C991 | |||
|description=CAGE_peak_28_at_CLASP1_5end | |description=CAGE_peak_28_at_CLASP1_5end | ||
|id=chr2:122247959..122247960,- | |id=chr2:122247959..122247960,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.04e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.38e-53!57;UBERON:0005068!5.38e-53!57;UBERON:0006241!5.38e-53!57;UBERON:0007135!5.38e-53!57;UBERON:0001893!2.08e-51!34;UBERON:0002616!4.16e-51!59;UBERON:0002780!3.93e-48!41;UBERON:0001890!3.93e-48!41;UBERON:0006240!3.93e-48!41;UBERON:0001869!4.42e-48!32;UBERON:0003080!6.10e-47!42;UBERON:0000955!6.23e-47!69;UBERON:0006238!6.23e-47!69;UBERON:0002791!2.11e-46!33;UBERON:0001017!5.36e-43!82;UBERON:0001950!3.56e-41!20;UBERON:0005743!7.24e-41!86;UBERON:0000956!2.69e-39!25;UBERON:0000203!2.69e-39!25;UBERON:0002020!3.39e-39!34;UBERON:0003528!3.39e-39!34;UBERON:0002619!1.95e-37!22;UBERON:0000073!1.03e-36!94;UBERON:0001016!1.03e-36!94;UBERON:0003075!4.20e-34!86;UBERON:0007284!4.20e-34!86;UBERON:0002346!1.93e-32!90;UBERON:0003056!1.34e-31!61;UBERON:0000033!5.29e-25!123;UBERON:0000153!1.12e-23!129;UBERON:0007811!1.12e-23!129;UBERON:0007023!3.20e-22!115;UBERON:0000200!6.46e-20!6;UBERON:0004121!5.71e-19!169;UBERON:0000924!1.90e-18!173;UBERON:0006601!1.90e-18!173;UBERON:0001871!2.98e-15!7;UBERON:0001872!9.29e-14!5;UBERON:0000025!4.22e-13!194;UBERON:0002771!6.61e-11!3;UBERON:0004733!3.10e-10!12;UBERON:0002028!3.10e-10!12;UBERON:0007277!3.10e-10!12;UBERON:0004111!8.49e-10!241;UBERON:0004732!1.85e-09!13;UBERON:0002022!4.52e-09!1;UBERON:0007190!6.65e-09!1;UBERON:0002902!7.75e-09!1;UBERON:0009899!7.75e-09!1;UBERON:0000064!1.01e-08!219;UBERON:0001882!1.05e-08!1;UBERON:0005403!1.05e-08!1;UBERON:0002336!1.78e-08!1;UBERON:0001018!1.78e-08!1;UBERON:0002473!1.78e-08!1;UBERON:0005340!1.78e-08!1;UBERON:0002316!1.78e-08!1;UBERON:0003544!1.78e-08!1;UBERON:0001020!1.78e-08!1;UBERON:0005970!1.78e-08!1;UBERON:0002437!1.78e-08!1;UBERON:0002581!1.91e-08!1;UBERON:0002680!3.08e-08!9;UBERON:0001895!3.08e-08!9;UBERON:0010092!3.08e-08!9;UBERON:0003076!3.27e-08!15;UBERON:0003057!3.27e-08!15;UBERON:0000477!1.21e-07!286;UBERON:0002021!4.79e-07!5;UBERON:0000483!8.75e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;4.66e-21;5!UBERON:0002037;8.34e-18;6!UBERON:0002680;2.31e-12;9!UBERON:0001895;2.31e-12;9!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.15e-21,5;UBERON:0002037,7.67e-18,6;UBERON:0006215,7.67e-18,6;UBERON:0002680,2.19e-12,9;UBERON:0001895,2.19e-12,9;UBERON:0010092,2.19e-12,9;UBERON:0004733,1.22e-09,12;UBERON:0002028,1.22e-09,12;UBERON:0007277,1.22e-09,12;UBERON:0004732,5.28e-09,13;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003076,5.55e-08,15;UBERON:0003057,5.55e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p28@CLASP1 | |short_description=p28@CLASP1 | ||
}} | }} |
Latest revision as of 18:23, 16 September 2015
Short description: | p28@CLASP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_CLASP1_5end |
Coexpression cluster: | C991_cerebellum_occipital_thalamus_middle_medial_parietal_hippocampus |
Association with transcript: | -55bp_to_ENST00000430234, ENST00000545861, uc010yyw.1_5end |
EntrezGene: | CLASP1 |
HGNC: | 17088 |
UniProt: | F5H2E2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.15e-21 | 5 |
cerebellum | 7.67e-18 | 6 |
rhombic lip | 7.67e-18 | 6 |
regional part of metencephalon | 2.19e-12 | 9 |
metencephalon | 2.19e-12 | 9 |
future metencephalon | 2.19e-12 | 9 |
segmental subdivision of hindbrain | 1.22e-09 | 12 |
hindbrain | 1.22e-09 | 12 |
presumptive hindbrain | 1.22e-09 | 12 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |