FFCP PHASE1:Hg19::chr17:69617073..69617130,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000412707,ENST00000545441_5end | |association_with_transcript=0bp_to_ENST00000412707,ENST00000545441_5end | ||
|cluster_id=chr17:69617073..69617130,+ | |||
|coexpression_cluster_id=C3303 | |||
|description=CAGE_peak_1_at_ENST00000412707_5end,CAGE_peak_1_at_ENST00000545441_5end | |description=CAGE_peak_1_at_ENST00000412707_5end,CAGE_peak_1_at_ENST00000545441_5end | ||
|id=chr17:69617073..69617130,+ | |id=chr17:69617073..69617130,+ | ||
|ontology_enrichment_celltype=CL:0000222!4.05e-18!119;CL:0000680!8.97e-17!57;CL:0000056!8.97e-17!57;CL:0000355!8.97e-17!57;CL:0000192!3.96e-16!42;CL:0000514!3.96e-16!42;CL:0000187!5.90e-16!54;CL:0000183!6.34e-16!59;CL:0000359!9.25e-16!32;CL:0000393!7.68e-15!60;CL:0000211!7.68e-15!60;CL:0000055!2.92e-13!180;CL:0000220!1.24e-09!246;CL:0002321!2.75e-09!248;CL:0002371!1.00e-07!591;CL:0000144!8.76e-07!625 | |ontology_enrichment_celltype=CL:0000222!4.05e-18!119;CL:0000680!8.97e-17!57;CL:0000056!8.97e-17!57;CL:0000355!8.97e-17!57;CL:0000192!3.96e-16!42;CL:0000514!3.96e-16!42;CL:0000187!5.90e-16!54;CL:0000183!6.34e-16!59;CL:0000359!9.25e-16!32;CL:0000393!7.68e-15!60;CL:0000211!7.68e-15!60;CL:0000055!2.92e-13!180;CL:0000220!1.24e-09!246;CL:0002321!2.75e-09!248;CL:0002371!1.00e-07!591;CL:0000144!8.76e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.91e-15;32!CL:0000192;1.20e-11;43!CL:0000187;5.03e-09;55!CL:0000393;2.75e-07;61!CL:0000211;2.75e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.68e-18,121;CL:0000680,8.14e-17,58;CL:0000056,8.14e-17,58;CL:0000355,8.14e-17,58;CL:0000192,3.97e-16,43;CL:0000514,3.97e-16,43;CL:0000187,5.38e-16,55;CL:0000359,9.01e-16,32;CL:0000393,6.71e-15,61;CL:0000211,6.71e-15,61;CL:0002321,1.52e-09,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.20e-11;43!CL:0000355;8.09e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.61e-23!79;UBERON:0007798!4.61e-23!79;UBERON:0001981!1.65e-22!60;UBERON:0007500!1.65e-22!60;UBERON:0004537!1.65e-22!60;UBERON:0006965!1.65e-22!60;UBERON:0000055!1.91e-21!69;UBERON:0004872!3.60e-21!84;UBERON:0001637!1.01e-18!42;UBERON:0003509!1.01e-18!42;UBERON:0004572!1.01e-18!42;UBERON:0003914!2.74e-18!118;UBERON:0000914!3.84e-17!83;UBERON:0002329!3.84e-17!83;UBERON:0003077!3.84e-17!83;UBERON:0003059!3.84e-17!83;UBERON:0007282!3.84e-17!83;UBERON:0009618!3.84e-17!83;UBERON:0007285!3.84e-17!83;UBERON:0004535!5.98e-17!110;UBERON:0001009!1.62e-16!113;UBERON:0002385!2.05e-16!63;UBERON:0001015!2.05e-16!63;UBERON:0000383!2.05e-16!63;UBERON:0001134!3.48e-16!61;UBERON:0002036!3.48e-16!61;UBERON:0003082!3.48e-16!61;UBERON:0004290!2.44e-15!70;UBERON:0005256!7.40e-15!143;UBERON:0000486!2.23e-14!82;UBERON:0004573!9.86e-14!33;UBERON:0004571!9.86e-14!33;UBERON:0000926!3.28e-13!448;UBERON:0004120!3.28e-13!448;UBERON:0006603!3.28e-13!448;UBERON:0000490!8.22e-13!138;UBERON:0000468!1.52e-10!659;UBERON:0003081!1.94e-10!216;UBERON:0002100!2.38e-10!216;UBERON:0002204!4.83e-09!167;UBERON:0000947!6.07e-08!21;UBERON:0010191!6.07e-08!21;UBERON:0000467!1.02e-07!625;UBERON:0000480!1.11e-07!626;UBERON:0000477!5.04e-07!286;UBERON:0003104!5.95e-07!238;UBERON:0009142!5.95e-07!238 | |ontology_enrichment_uberon=UBERON:0002049!4.61e-23!79;UBERON:0007798!4.61e-23!79;UBERON:0001981!1.65e-22!60;UBERON:0007500!1.65e-22!60;UBERON:0004537!1.65e-22!60;UBERON:0006965!1.65e-22!60;UBERON:0000055!1.91e-21!69;UBERON:0004872!3.60e-21!84;UBERON:0001637!1.01e-18!42;UBERON:0003509!1.01e-18!42;UBERON:0004572!1.01e-18!42;UBERON:0003914!2.74e-18!118;UBERON:0000914!3.84e-17!83;UBERON:0002329!3.84e-17!83;UBERON:0003077!3.84e-17!83;UBERON:0003059!3.84e-17!83;UBERON:0007282!3.84e-17!83;UBERON:0009618!3.84e-17!83;UBERON:0007285!3.84e-17!83;UBERON:0004535!5.98e-17!110;UBERON:0001009!1.62e-16!113;UBERON:0002385!2.05e-16!63;UBERON:0001015!2.05e-16!63;UBERON:0000383!2.05e-16!63;UBERON:0001134!3.48e-16!61;UBERON:0002036!3.48e-16!61;UBERON:0003082!3.48e-16!61;UBERON:0004290!2.44e-15!70;UBERON:0005256!7.40e-15!143;UBERON:0000486!2.23e-14!82;UBERON:0004573!9.86e-14!33;UBERON:0004571!9.86e-14!33;UBERON:0000926!3.28e-13!448;UBERON:0004120!3.28e-13!448;UBERON:0006603!3.28e-13!448;UBERON:0000490!8.22e-13!138;UBERON:0000468!1.52e-10!659;UBERON:0003081!1.94e-10!216;UBERON:0002100!2.38e-10!216;UBERON:0002204!4.83e-09!167;UBERON:0000947!6.07e-08!21;UBERON:0010191!6.07e-08!21;UBERON:0000467!1.02e-07!625;UBERON:0000480!1.11e-07!626;UBERON:0000477!5.04e-07!286;UBERON:0003104!5.95e-07!238;UBERON:0009142!5.95e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.07e-14;42!UBERON:0003509;7.07e-14;42!UBERON:0004572;7.07e-14;42!UBERON:0004573;1.62e-12;33!UBERON:0004571;1.62e-12;33!UBERON:0007500;9.70e-12;56!UBERON:0001981;9.70e-12;56!UBERON:0004537;9.70e-12;56!UBERON:0003914;1.04e-09;74!UBERON:0002049;1.75e-09;75!UBERON:0007798;1.75e-09;75!UBERON:0000055;2.84e-09;65!UBERON:0000947;4.40e-08;21!UBERON:0010191;4.40e-08;21 | |||
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| ||
|short_description=p1@ENST00000412707,p1@ENST00000545441 | |short_description=p1@ENST00000412707,p1@ENST00000545441 | ||
}} | }} |
Latest revision as of 20:30, 25 July 2015
Short description: | p1@ENST00000412707, p1@ENST00000545441 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000412707_5end, CAGE_peak_1_at_ENST00000545441_5end |
Coexpression cluster: | C3303_Smooth_Adipocyte_smooth_Mallassezderived_Fibroblast_Endothelial_Aortic |
Association with transcript: | 0bp_to_ENST00000412707, ENST00000545441_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.68e-18 | 121 |
muscle precursor cell | 8.14e-17 | 58 |
myoblast | 8.14e-17 | 58 |
multi-potent skeletal muscle stem cell | 8.14e-17 | 58 |
smooth muscle cell | 3.97e-16 | 43 |
smooth muscle myoblast | 3.97e-16 | 43 |
muscle cell | 5.38e-16 | 55 |
vascular associated smooth muscle cell | 9.01e-16 | 32 |
electrically responsive cell | 6.71e-15 | 61 |
electrically active cell | 6.71e-15 | 61 |
embryonic cell | 1.52e-09 | 250 |