FFCP PHASE1:Hg19::chr17:6676791..6676834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54739 | |EntrezGene=54739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30932 | |HGNC=30932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-152bp_to_AK091799_5end | |association_with_transcript=-152bp_to_AK091799_5end | ||
|cluster_id=chr17:6676791..6676834,+ | |||
|description=CAGE_peak_7_at_XAF1_5end | |description=CAGE_peak_7_at_XAF1_5end | ||
|id=chr17:6676791..6676834,+ | |id=chr17:6676791..6676834,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.38e-17!42;CL:0000860!9.92e-16!45;CL:0002087!4.66e-15!119;CL:0002031!2.04e-14!124;CL:0002194!9.18e-14!63;CL:0000576!9.18e-14!63;CL:0000040!9.18e-14!63;CL:0000559!9.18e-14!63;CL:0000839!1.03e-13!70;CL:0000766!1.41e-13!76;CL:0000738!1.72e-13!140;CL:0000557!2.36e-13!71;CL:0002009!5.32e-13!65;CL:0002032!6.37e-12!165;CL:0000837!6.37e-12!165;CL:0000037!9.26e-12!172;CL:0000566!9.26e-12!172;CL:0000988!1.18e-10!182;CL:0000763!1.27e-09!112;CL:0000049!1.27e-09!112 | |ontology_enrichment_celltype=CL:0002057!1.38e-17!42;CL:0000860!9.92e-16!45;CL:0002087!4.66e-15!119;CL:0002031!2.04e-14!124;CL:0002194!9.18e-14!63;CL:0000576!9.18e-14!63;CL:0000040!9.18e-14!63;CL:0000559!9.18e-14!63;CL:0000839!1.03e-13!70;CL:0000766!1.41e-13!76;CL:0000738!1.72e-13!140;CL:0000557!2.36e-13!71;CL:0002009!5.32e-13!65;CL:0002032!6.37e-12!165;CL:0000837!6.37e-12!165;CL:0000037!9.26e-12!172;CL:0000566!9.26e-12!172;CL:0000988!1.18e-10!182;CL:0000763!1.27e-09!112;CL:0000049!1.27e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.25e-15;33!CL:0002057;3.25e-15;33!CL:0000473;5.00e-14;39!CL:0000234;5.00e-14;39!CL:0000576;1.56e-09;48!CL:1000415;2.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.26e-15,48;CL:0000234,9.26e-15,48;CL:0000860,4.27e-13,42;CL:0002057,4.27e-13,42;CL:0000766,6.03e-12,72;CL:0002194,1.22e-11,59;CL:0000576,1.22e-11,59;CL:0000040,1.22e-11,59;CL:0000559,1.22e-11,59;CL:0002009,3.08e-11,61;CL:0000839,2.46e-10,66;CL:0000557,3.59e-10,67;CL:0000763,1.23e-07,108;CL:0000049,1.23e-07,108;CL:1000415,2.15e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;6.05e-13;1!CL:0002057;4.49e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.77e-12!80;UBERON:0002390!1.59e-11!102;UBERON:0003061!1.59e-11!102;UBERON:0001474!3.17e-11!86;UBERON:0002193!2.49e-09!112;UBERON:0004765!4.02e-09!101;UBERON:0001434!4.02e-09!101;UBERON:0002405!3.16e-08!115 | |ontology_enrichment_uberon=UBERON:0002371!2.77e-12!80;UBERON:0002390!1.59e-11!102;UBERON:0003061!1.59e-11!102;UBERON:0001474!3.17e-11!86;UBERON:0002193!2.49e-09!112;UBERON:0004765!4.02e-09!101;UBERON:0001434!4.02e-09!101;UBERON:0002405!3.16e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000989;6.05e-13;1!UBERON:0002146;6.05e-13;1!UBERON:0002171;6.05e-13;1!UBERON:0008811;6.05e-13;1!UBERON:0005623;6.05e-13;1!UBERON:0006518;6.05e-13;1!UBERON:0008949;6.05e-13;1!UBERON:0000101;6.05e-13;1!UBERON:0002167;6.05e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,3.33e-13,1;UBERON:0008811,3.33e-13,1;UBERON:0006258,3.33e-13,1;UBERON:0005876,3.33e-13,1;UBERON:0004874,3.33e-13,1;UBERON:0002171,5.38e-13,1;UBERON:0006518,5.38e-13,1;UBERON:0008949,5.38e-13,1;UBERON:0000101,5.38e-13,1;UBERON:0002167,5.38e-13,1;UBERON:0002146,6.06e-13,1;UBERON:0005623,6.06e-13,1;UBERON:0002371,7.02e-09,76;UBERON:0001474,3.57e-08,82;UBERON:0004765,2.24e-07,90;UBERON:0002405,4.11e-07,93 | |||
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| ||
|short_description=p7@XAF1 | |short_description=p7@XAF1 | ||
}} | }} |
Latest revision as of 00:46, 17 September 2015
Short description: | p7@XAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_XAF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -152bp_to_AK091799_5end |
EntrezGene: | XAF1 |
HGNC: | 30932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.26e-15 | 48 |
phagocyte | 9.26e-15 | 48 |
classical monocyte | 4.27e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.27e-13 | 42 |
myeloid leukocyte | 6.03e-12 | 72 |
monopoietic cell | 1.22e-11 | 59 |
monocyte | 1.22e-11 | 59 |
monoblast | 1.22e-11 | 59 |
promonocyte | 1.22e-11 | 59 |
macrophage dendritic cell progenitor | 3.08e-11 | 61 |
myeloid lineage restricted progenitor cell | 2.46e-10 | 66 |
granulocyte monocyte progenitor cell | 3.59e-10 | 67 |
myeloid cell | 1.23e-07 | 108 |
common myeloid progenitor | 1.23e-07 | 108 |
epithelial cell of gall bladder | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
penis | 3.33e-13 | 1 |
intromittent organ | 3.33e-13 | 1 |
lateral plate mesenchyme | 3.33e-13 | 1 |
undifferentiated genital tubercle | 3.33e-13 | 1 |
somatopleure | 3.33e-13 | 1 |
lower lobe of right lung | 5.38e-13 | 1 |
right lung lobe | 5.38e-13 | 1 |
lower lobe of lung | 5.38e-13 | 1 |
lobe of lung | 5.38e-13 | 1 |
right lung | 5.38e-13 | 1 |
pulmonary valve | 6.06e-13 | 1 |
semi-lunar valve | 6.06e-13 | 1 |
bone marrow | 7.02e-09 | 76 |
bone element | 3.57e-08 | 82 |
skeletal element | 2.24e-07 | 90 |
immune system | 4.11e-07 | 93 |