FFCP PHASE1:Hg19::chr17:66703304..66703336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:66703304..66703336,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr17:66703304..66703336,- | |description=CAGE_peak_at_chr17:66703304..66703336,- | ||
|id=chr17:66703304..66703336,- | |id=chr17:66703304..66703336,- | ||
|ontology_enrichment_celltype=CL:0000048!1.78e-20!430;CL:0000723!9.95e-20!436;CL:0000034!9.13e-19!444;CL:0000057!4.06e-16!75;CL:0000134!3.16e-15!358;CL:0002320!2.07e-14!365;CL:0000219!4.93e-12!390;CL:0000055!9.68e-12!180;CL:0002334!1.17e-11!12;CL:0002371!1.89e-10!591;CL:0002057!7.00e-09!42;CL:0000144!7.50e-09!625;CL:0002570!2.65e-08!8;CL:0000860!6.42e-08!45;CL:0000188!9.26e-08!9 | |ontology_enrichment_celltype=CL:0000048!1.78e-20!430;CL:0000723!9.95e-20!436;CL:0000034!9.13e-19!444;CL:0000057!4.06e-16!75;CL:0000134!3.16e-15!358;CL:0002320!2.07e-14!365;CL:0000219!4.93e-12!390;CL:0000055!9.68e-12!180;CL:0002334!1.17e-11!12;CL:0002371!1.89e-10!591;CL:0002057!7.00e-09!42;CL:0000144!7.50e-09!625;CL:0002570!2.65e-08!8;CL:0000860!6.42e-08!45;CL:0000188!9.26e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.78e-16;33!CL:0002057;2.78e-16;33!CL:0000473;3.10e-13;39!CL:0000234;3.10e-13;39!CL:0002521;1.50e-12;3!CL:0000576;2.38e-10;48!CL:0002552;8.72e-08;5!CL:0002620;1.13e-07;23!CL:0000136;2.76e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.16e-16,42;CL:0002057,2.16e-16,42;CL:0000473,5.02e-16,48;CL:0000234,5.02e-16,48;CL:0002521,1.09e-12,3;CL:0002194,4.09e-12,59;CL:0000576,4.09e-12,59;CL:0000040,4.09e-12,59;CL:0000559,4.09e-12,59;CL:0002009,1.30e-11,61;CL:0000048,4.16e-11,427;CL:0000723,8.13e-11,433;CL:0000134,9.17e-11,354;CL:0000839,1.73e-10,66;CL:0000034,1.94e-10,441;CL:0002320,2.23e-10,361;CL:0000557,2.77e-10,67;CL:0000766,2.39e-09,72;CL:0000219,5.11e-09,386;CL:0000136,1.05e-08,15;CL:0000057,2.65e-08,76;CL:0002620,1.12e-07,23;CL:0002552,1.16e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.70e-13;42 | |||
|ontology_enrichment_disease=DOID:2394!2.34e-07!14 | |ontology_enrichment_disease=DOID:2394!2.34e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:17;1.05e-07;5!DOID:450;1.05e-07;5!DOID:66;1.05e-07;5!DOID:423;1.05e-07;5!DOID:0080000;1.05e-07;5!DOID:11722;1.05e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.24e-08,5;DOID:450,7.24e-08,5;DOID:66,7.24e-08,5;DOID:423,7.24e-08,5;DOID:0080000,7.24e-08,5;DOID:11722,7.24e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.20e-14!375;UBERON:0001013!3.37e-11!14;UBERON:0002204!1.13e-09!167;UBERON:0003102!5.56e-08!95;UBERON:0002072!5.70e-08!5;UBERON:0002199!8.76e-07!45;UBERON:0002416!8.76e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;7.85e-13;14!UBERON:0002072;8.58e-13;5!UBERON:0002190;1.50e-12;3!UBERON:0002199;2.80e-08;46!UBERON:0002416;2.80e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,6.30e-13,5;UBERON:0001013,7.04e-13,14;UBERON:0002190,1.09e-12,3;UBERON:0002199,8.21e-12,46;UBERON:0002416,8.21e-12,46;UBERON:0003102,3.43e-11,99;UBERON:0002384,7.52e-10,371;UBERON:0002371,1.09e-08,76;UBERON:0001474,8.00e-08,82;UBERON:0001434,8.13e-08,100;UBERON:0002204,2.30e-07,167;UBERON:0004765,7.48e-07,90 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.986680828671798,0,1.34088328328186,0,2.53299878168311,1.89515962028049,2.08948502559871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,6.04154023876516,10.7587496742222,13.4794871036494,0,0,0,0,0,0,0.918251677112708,0.641858054152187,0,9.23583640522805,9.97318288108159,8.09827026012119,1.7412554317715,0.56738522469114,0.622822248995575,4.01997864410789,8.86520961314342,7.38442071997397,3.63239701580021,1.84138817993782,2.84816148696796,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,1.02077085627447,0,0.413303124703062,3.56400857184616,2.22540236350701,0.910161361938026,0.718618141816238,0,0.125118519871964,0,2.19488810440419,0.30648779579902,1.80285670687916,0,0,2.34913127700424,2.96704661623387,0,1.95799805553034,0.257640540045629,2.04728541964749,0,0.292311015483596,0.252433774244115,4.87864462804187,4.68773564774555,0,0.302256294682921,1.01736355386293,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,1.06375246633948,1.04007436911366,0.514414748524284,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0.300946099727719,0,0,0,0,1.47702144595741,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,1.53766979106841,0.511707249066704,0.64341568457443,1.48418066444991,0.308419387605311,1.42049380250502,0.0821271560138091,0,0.348631135379878,0,0,0,0.459257792658427,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.275673144969061,0.322260734604821,0.145016693914229,0.255679882248303,2.49289699810865,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,9.86430068570404,0,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0.545999645631943,0.989838023675989,2.26016233240486,1.10273068709225,0,0,0,0,0,0,0,0,0,0,3.19284957663538,0.211107635297664,0,1.13841952129715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0.151649117541648,0,0,0,0,0.597019211547496,1.40227985908335,0.554805861502613,0,0.251567901752575,0,0.457680136793847,0.907385542579434,0,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0.300515217994437,0,0.406870733204662,0.181848659202559,0.644463342254931,0.928067519756987,0,0,1.03018711554838,0.336749488765919,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85538840518309,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=1.09007027562334,0.214100523890983,0.986680828671798,0,1.34088328328186,0,2.53299878168311,1.89515962028049,2.08948502559871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,6.04154023876516,10.7587496742222,13.4794871036494,0,0,0,0,0,0,0.918251677112708,0.641858054152187,0,9.23583640522805,9.97318288108159,8.09827026012119,1.7412554317715,0.56738522469114,0.622822248995575,4.01997864410789,8.86520961314342,7.38442071997397,3.63239701580021,1.84138817993782,2.84816148696796,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,1.02077085627447,0,0.413303124703062,3.56400857184616,2.22540236350701,0.910161361938026,0.718618141816238,0,0.125118519871964,0,2.19488810440419,0.30648779579902,1.80285670687916,0,0,2.34913127700424,2.96704661623387,0,1.95799805553034,0.257640540045629,2.04728541964749,0,0.292311015483596,0.252433774244115,4.87864462804187,4.68773564774555,0,0.302256294682921,1.01736355386293,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,1.06375246633948,1.04007436911366,0.514414748524284,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0.300946099727719,0,0,0,0,1.47702144595741,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,1.53766979106841,0.511707249066704,0.64341568457443,1.48418066444991,0.308419387605311,1.42049380250502,0.0821271560138091,0,0.348631135379878,0,0,0,0.459257792658427,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.275673144969061,0.322260734604821,0.145016693914229,0.255679882248303,2.49289699810865,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,9.86430068570404,0,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0.545999645631943,0.989838023675989,2.26016233240486,1.10273068709225,0,0,0,0,0,0,0,0,0,0,3.19284957663538,0.211107635297664,0,1.13841952129715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0.151649117541648,0,0,0,0,0.597019211547496,1.40227985908335,0.554805861502613,0,0.251567901752575,0,0.457680136793847,0.907385542579434,0,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0.300515217994437,0,0.406870733204662,0.181848659202559,0.644463342254931,0.928067519756987,0,0,1.03018711554838,0.336749488765919,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85538840518309,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr17:66703304..66703336,- | |short_description=p@chr17:66703304..66703336,- | ||
}} | }} |
Latest revision as of 20:18, 25 July 2015
Short description: | p@chr17:66703304..66703336, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:66703304..66703336, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.16e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.16e-16 | 42 |
defensive cell | 5.02e-16 | 48 |
phagocyte | 5.02e-16 | 48 |
subcutaneous fat cell | 1.09e-12 | 3 |
monopoietic cell | 4.09e-12 | 59 |
monocyte | 4.09e-12 | 59 |
monoblast | 4.09e-12 | 59 |
promonocyte | 4.09e-12 | 59 |
macrophage dendritic cell progenitor | 1.30e-11 | 61 |
multi fate stem cell | 4.16e-11 | 427 |
somatic stem cell | 8.13e-11 | 433 |
mesenchymal cell | 9.17e-11 | 354 |
myeloid lineage restricted progenitor cell | 1.73e-10 | 66 |
stem cell | 1.94e-10 | 441 |
connective tissue cell | 2.23e-10 | 361 |
granulocyte monocyte progenitor cell | 2.77e-10 | 67 |
myeloid leukocyte | 2.39e-09 | 72 |
motile cell | 5.11e-09 | 386 |
fat cell | 1.05e-08 | 15 |
fibroblast | 2.65e-08 | 76 |
skin fibroblast | 1.12e-07 | 23 |
fibroblast of gingiva | 1.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 6.30e-13 | 5 |
adipose tissue | 7.04e-13 | 14 |
subcutaneous adipose tissue | 1.09e-12 | 3 |
integument | 8.21e-12 | 46 |
integumental system | 8.21e-12 | 46 |
surface structure | 3.43e-11 | 99 |
connective tissue | 7.52e-10 | 371 |
bone marrow | 1.09e-08 | 76 |
bone element | 8.00e-08 | 82 |
skeletal system | 8.13e-08 | 100 |
musculoskeletal system | 2.30e-07 | 167 |
skeletal element | 7.48e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.24e-08 | 5 |
myotonic disease | 7.24e-08 | 5 |
muscle tissue disease | 7.24e-08 | 5 |
myopathy | 7.24e-08 | 5 |
muscular disease | 7.24e-08 | 5 |
myotonic dystrophy | 7.24e-08 | 5 |