FFCP PHASE1:Hg19::chr17:66597246..66597255,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54757 | |EntrezGene=54757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23015 | |HGNC=23015 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MK3,B7Z4Y3,Q8IYA5 | |UniProt=Q96MK3,B7Z4Y3,Q8IYA5 | ||
|association_with_transcript=-151bp_to_ENST00000226094,NM_001243746,NM_017565,uc002jho.2,uc010wqp.1_5end | |association_with_transcript=-151bp_to_ENST00000226094,NM_001243746,NM_017565,uc002jho.2,uc010wqp.1_5end | ||
|cluster_id=chr17:66597246..66597255,- | |||
|coexpression_cluster_id=C1790 | |||
|description=CAGE_peak_7_at_FAM20A_5end | |description=CAGE_peak_7_at_FAM20A_5end | ||
|id=chr17:66597246..66597255,- | |id=chr17:66597246..66597255,- | ||
|ontology_enrichment_celltype=CL:0002334!4.61e-08!12;CL:0000057!4.56e-07!75 | |ontology_enrichment_celltype=CL:0002334!4.61e-08!12;CL:0000057!4.56e-07!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.38e-08,361;CL:0000134,4.20e-08,354;CL:0000057,6.30e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!3.55e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.53e-08;14!UBERON:0001829;5.09e-08;2!UBERON:0005406;2.88e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.48e-08,14;UBERON:0001829,4.94e-08,2;UBERON:0002384,7.52e-08,371;UBERON:0005406,1.41e-07,2 | |||
|phase1_expression=0.363356758541113,1.07050261945492,2.81908808191942,0,0,1.74467704820074,0,1.26343974685366,2.08948502559871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,1.11957737119962,0.647787332037959,1.28787783817093,0.145398238779565,0,0,0,0,0.309706370895104,1.7261543539329,2.0492856522328,1.41889337933151,0,0,0,0.941211697713023,0,0,0,0,0.639337125799041,1.64925650093358,1.39624560335142,0.852449501065388,0.580418477257168,0,1.24564449799115,1.50749199154046,1.0429658368404,0.868755378820466,0,0.368277635987565,0,0.211255286311942,0,0,0.112328631146495,0,0,1.42506371870624,0.59675003159727,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.392937226493138,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,1.06400514659507,0,0,0,1.8672662123986,0,0,0,0,0.468642863667593,0,0,0.149448680551801,0,0,0,0.61246251376468,0,1.34323515528495,0,1.23633464639278,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0,0,1.95309476578576,0,0,1.06778694409284,1.69545520927649,0.300091096084402,0.412210116953756,1.28820270022815,0.930584281657949,0,0.0974370051611986,0.252433774244115,1.28869858099219,0,0,0.10075209822764,0,0,0,0,0.609868530647977,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0.738651018262192,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0.602878754119172,0.871533458600294,1.19967589418468,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.271265023699736,0.207970861530807,0,0,0,4.21324539618807,6.82222512167955,0,0.664225598535437,0.184369168541703,0.60818530127658,0.587403472388222,0.686286847621712,0,0,0,0,0,0,0.496215615637554,0.306923946576125,1.12264037773229,3.07533958213682,0.511707249066704,1.12597744800525,1.48418066444991,0.308419387605311,1.24293207719189,0.0821271560138091,0,0.464841513839837,0.120859449591622,0,0,0.229628896329213,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,8.03419649220798,0.290012154876366,0.154048617114644,0.15350367472613,0,0.859361958946189,0.290033387828457,0.0852266274161009,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0.42793898803392,5.72765846266686,0,0,0,0,0,0,0,0,0,0,0.545999645631943,0.707027159768564,5.65040583101214,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.633322905892992,2.30506425071931,0,2.0996083214699,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0.227884111694002,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,2.46427660551103,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0.229160424011684,0.717873024576814,0.399358000997982,0,0,0.201550417460179,0,0,0.0787831823072236,0.412079291905832,0.0674035438541849,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0.670869375198532,0.157611414598396,0.419636705079985,0,0.179287339332845,0,0,0,0,4.88699641578341,2.5926644736038,0.653174720218818,0,0,0,0,1.17241786942466,0,0,0,0,0,0.640724475406168,0.471612915298998,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,2.77402930751307,1.7046270474758,2.51567901752575,1.77962244319307,0,4.38569678913393,0.466311601748341,0.147855149989634,0.159296767163702,0,0.465788870628778,2.48823724704513,0,0,1.05180326298053,0.380805212168795,0,0,0.214821114084977,0.928067519756987,2.3885753321917,0,0.686791410365586,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,2.74128883428591,0.496211178389294,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.549451649953598,0,0,0.913158720509496,0,0,1.07214816264985,0,0,0,2.40513409419076,0,0,0,5.59295566466361,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0.730336388246517,2.2936464170227,0,0,0,0.436350690340377,0,1.11598505450025,1.38652688589425,0.432626562123789,0,0.546327859818478,0,0.305966489225945,0.534434810531121,0.551369397209069,0.752122617877125,0.227336094654718,0,0,0.103432995861895,0.426467963801962,0,0.193766729508018,0.31037357147929,0,0.636471582781649,0,0.217716747896961,0,0.336760265072938,0.78894425931944,0,0,0,0,0,0,0.855690109280065,0.813792356631477,0,0,0 | |phase1_expression=0.363356758541113,1.07050261945492,2.81908808191942,0,0,1.74467704820074,0,1.26343974685366,2.08948502559871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,1.11957737119962,0.647787332037959,1.28787783817093,0.145398238779565,0,0,0,0,0.309706370895104,1.7261543539329,2.0492856522328,1.41889337933151,0,0,0,0.941211697713023,0,0,0,0,0.639337125799041,1.64925650093358,1.39624560335142,0.852449501065388,0.580418477257168,0,1.24564449799115,1.50749199154046,1.0429658368404,0.868755378820466,0,0.368277635987565,0,0.211255286311942,0,0,0.112328631146495,0,0,1.42506371870624,0.59675003159727,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.392937226493138,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,1.06400514659507,0,0,0,1.8672662123986,0,0,0,0,0.468642863667593,0,0,0.149448680551801,0,0,0,0.61246251376468,0,1.34323515528495,0,1.23633464639278,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0,0,1.95309476578576,0,0,1.06778694409284,1.69545520927649,0.300091096084402,0.412210116953756,1.28820270022815,0.930584281657949,0,0.0974370051611986,0.252433774244115,1.28869858099219,0,0,0.10075209822764,0,0,0,0,0.609868530647977,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0.738651018262192,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0.602878754119172,0.871533458600294,1.19967589418468,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.271265023699736,0.207970861530807,0,0,0,4.21324539618807,6.82222512167955,0,0.664225598535437,0.184369168541703,0.60818530127658,0.587403472388222,0.686286847621712,0,0,0,0,0,0,0.496215615637554,0.306923946576125,1.12264037773229,3.07533958213682,0.511707249066704,1.12597744800525,1.48418066444991,0.308419387605311,1.24293207719189,0.0821271560138091,0,0.464841513839837,0.120859449591622,0,0,0.229628896329213,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,8.03419649220798,0.290012154876366,0.154048617114644,0.15350367472613,0,0.859361958946189,0.290033387828457,0.0852266274161009,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0.42793898803392,5.72765846266686,0,0,0,0,0,0,0,0,0,0,0.545999645631943,0.707027159768564,5.65040583101214,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.633322905892992,2.30506425071931,0,2.0996083214699,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0.227884111694002,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,2.46427660551103,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0.229160424011684,0.717873024576814,0.399358000997982,0,0,0.201550417460179,0,0,0.0787831823072236,0.412079291905832,0.0674035438541849,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0.670869375198532,0.157611414598396,0.419636705079985,0,0.179287339332845,0,0,0,0,4.88699641578341,2.5926644736038,0.653174720218818,0,0,0,0,1.17241786942466,0,0,0,0,0,0.640724475406168,0.471612915298998,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,2.77402930751307,1.7046270474758,2.51567901752575,1.77962244319307,0,4.38569678913393,0.466311601748341,0.147855149989634,0.159296767163702,0,0.465788870628778,2.48823724704513,0,0,1.05180326298053,0.380805212168795,0,0,0.214821114084977,0.928067519756987,2.3885753321917,0,0.686791410365586,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,2.74128883428591,0.496211178389294,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.549451649953598,0,0,0.913158720509496,0,0,1.07214816264985,0,0,0,2.40513409419076,0,0,0,5.59295566466361,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0.730336388246517,2.2936464170227,0,0,0,0.436350690340377,0,1.11598505450025,1.38652688589425,0.432626562123789,0,0.546327859818478,0,0.305966489225945,0.534434810531121,0.551369397209069,0.752122617877125,0.227336094654718,0,0,0.103432995861895,0.426467963801962,0,0.193766729508018,0.31037357147929,0,0.636471582781649,0,0.217716747896961,0,0.336760265072938,0.78894425931944,0,0,0,0,0,0,0.855690109280065,0.813792356631477,0,0,0 | ||
|short_description=p7@FAM20A | |short_description=p7@FAM20A | ||
}} | }} |
Latest revision as of 00:28, 17 September 2015
Short description: | p7@FAM20A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAM20A_5end |
Coexpression cluster: | C1790_parotid_salivary_Osteoblast_mesenchymal_Smooth_Synoviocyte_submaxillary |
Association with transcript: | -151bp_to_ENST00000226094, NM_001243746, NM_017565, uc002jho.2, uc010wqp.1_5end |
EntrezGene: | FAM20A |
HGNC: | 23015 |
UniProt: | Q96MK3B7Z4Y3Q8IYA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.38e-08 | 361 |
mesenchymal cell | 4.20e-08 | 354 |
fibroblast | 6.30e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.48e-08 | 14 |
major salivary gland | 4.94e-08 | 2 |
connective tissue | 7.52e-08 | 371 |
perirenal fat | 1.41e-07 | 2 |