FFCP PHASE1:Hg19::chr2:114647617..114647739,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10096 | |EntrezGene=10096 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=170 | |HGNC=170 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEW2,F8WDR7,F8WE84,F5H3P5,B4DTI0 | |UniProt=F8WEW2,F8WDR7,F8WE84,F5H3P5,B4DTI0 | ||
|association_with_transcript=0bp_to_ENST00000415792,ENST00000443297,ENST00000446821,ENST00000536059,ENST00000544784_5end | |association_with_transcript=0bp_to_ENST00000415792,ENST00000443297,ENST00000446821,ENST00000536059,ENST00000544784_5end | ||
|cluster_id=chr2:114647617..114647739,+ | |||
|coexpression_cluster_id=C1246 | |||
|description=CAGE_peak_1_at_ACTR3_5end | |description=CAGE_peak_1_at_ACTR3_5end | ||
|id=chr2:114647617..114647739,+ | |id=chr2:114647617..114647739,+ | ||
|ontology_enrichment_celltype=CL:0000048!4.51e-42!430;CL:0000723!4.51e-41!436;CL:0000034!9.24e-39!444;CL:0000134!4.24e-35!358;CL:0002032!1.77e-34!165;CL:0000837!1.77e-34!165;CL:0000037!1.49e-33!172;CL:0000566!1.49e-33!172;CL:0002320!5.68e-33!365;CL:0000738!8.91e-33!140;CL:0002371!3.16e-32!591;CL:0000988!1.85e-31!182;CL:0000763!3.40e-31!112;CL:0000049!3.40e-31!112;CL:0000144!6.48e-31!625;CL:0000003!3.19e-30!722;CL:0002031!1.44e-29!124;CL:0000766!2.20e-29!76;CL:0000219!8.55e-29!390;CL:0002009!8.94e-29!65;CL:0002087!2.90e-28!119;CL:0000557!8.31e-28!71;CL:0002194!1.38e-27!63;CL:0000576!1.38e-27!63;CL:0000040!1.38e-27!63;CL:0000559!1.38e-27!63;CL:0000839!3.72e-27!70;CL:0002057!2.71e-25!42;CL:0000012!7.59e-24!682;CL:0000548!9.40e-24!679;CL:0000004!9.40e-24!679;CL:0000255!9.40e-24!679;CL:0000860!3.23e-21!45;CL:0000063!1.17e-18!578 | |ontology_enrichment_celltype=CL:0000048!4.51e-42!430;CL:0000723!4.51e-41!436;CL:0000034!9.24e-39!444;CL:0000134!4.24e-35!358;CL:0002032!1.77e-34!165;CL:0000837!1.77e-34!165;CL:0000037!1.49e-33!172;CL:0000566!1.49e-33!172;CL:0002320!5.68e-33!365;CL:0000738!8.91e-33!140;CL:0002371!3.16e-32!591;CL:0000988!1.85e-31!182;CL:0000763!3.40e-31!112;CL:0000049!3.40e-31!112;CL:0000144!6.48e-31!625;CL:0000003!3.19e-30!722;CL:0002031!1.44e-29!124;CL:0000766!2.20e-29!76;CL:0000219!8.55e-29!390;CL:0002009!8.94e-29!65;CL:0002087!2.90e-28!119;CL:0000557!8.31e-28!71;CL:0002194!1.38e-27!63;CL:0000576!1.38e-27!63;CL:0000040!1.38e-27!63;CL:0000559!1.38e-27!63;CL:0000839!3.72e-27!70;CL:0002057!2.71e-25!42;CL:0000012!7.59e-24!682;CL:0000548!9.40e-24!679;CL:0000004!9.40e-24!679;CL:0000255!9.40e-24!679;CL:0000860!3.23e-21!45;CL:0000063!1.17e-18!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-19;33!CL:0002057;2.03e-19;33!CL:0000473;2.58e-19;39!CL:0000234;2.58e-19;39!CL:0000576;2.56e-17;48!CL:0000766;2.37e-14;69!CL:0000763;2.30e-09;100!CL:0000738;2.61e-09;136!CL:0002087;1.72e-08;104!CL:0000219;2.62e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.64e-44,427;CL:0000723,5.00e-43,433;CL:0000034,1.20e-40,441;CL:0000134,4.24e-37,354;CL:0002032,1.26e-36,161;CL:0000837,1.26e-36,161;CL:0000037,1.34e-35,168;CL:0000738,4.21e-35,136;CL:0002320,6.88e-35,361;CL:0000988,6.20e-34,177;CL:0000763,7.85e-34,108;CL:0000049,7.85e-34,108;CL:0000766,9.28e-33,72;CL:0002009,1.58e-32,61;CL:0002031,6.30e-32,120;CL:0002194,2.60e-31,59;CL:0000576,2.60e-31,59;CL:0000040,2.60e-31,59;CL:0000559,2.60e-31,59;CL:0000557,3.20e-31,67;CL:0002087,1.28e-30,115;CL:0000839,1.51e-30,66;CL:0000219,1.59e-30,386;CL:0000473,6.19e-29,48;CL:0000234,6.19e-29,48;CL:0000860,2.71e-25,42;CL:0002057,2.71e-25,42 | |||
|ontology_enrichment_development_v019=CL:0002057;2.16e-18;42!CL:0000049;5.05e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.97e-32!375;UBERON:0002390!9.77e-30!102;UBERON:0003061!9.77e-30!102;UBERON:0002193!2.32e-28!112;UBERON:0002371!1.58e-24!80;UBERON:0001474!3.95e-22!86;UBERON:0004765!8.80e-21!101;UBERON:0001434!8.80e-21!101;UBERON:0002204!1.26e-20!167;UBERON:0003081!3.14e-17!216;UBERON:0002405!6.01e-16!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.61e-34,371;UBERON:0002390,1.82e-32,98;UBERON:0003061,1.82e-32,98;UBERON:0002193,7.94e-31,108;UBERON:0002371,2.27e-27,76;UBERON:0002405,1.07e-25,93;UBERON:0001474,1.24e-24,82;UBERON:0004765,9.80e-24,90;UBERON:0001434,6.56e-22,100;UBERON:0002204,2.33e-21,167;UBERON:0003081,9.66e-21,203;UBERON:0000926,3.56e-16,315;UBERON:0004120,3.56e-16,315;UBERON:0006603,3.56e-16,315 | |||
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231995362 | ||
|short_description=p1@ACTR3 | |short_description=p1@ACTR3 | ||
}} | }} |
Latest revision as of 13:44, 16 September 2015
Short description: | p1@ACTR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTR3_5end |
Coexpression cluster: | C1246_Neutrophils_Eosinophils_CD14_migratory_Macrophage_Dendritic_Mast |
Association with transcript: | 0bp_to_ENST00000415792, ENST00000443297, ENST00000446821, ENST00000536059, ENST00000544784_5end |
EntrezGene: | ACTR3 |
HGNC: | 170 |
UniProt: | F8WEW2F8WDR7F8WE84F5H3P5B4DTI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.64e-44 | 427 |
somatic stem cell | 5.00e-43 | 433 |
stem cell | 1.20e-40 | 441 |
mesenchymal cell | 4.24e-37 | 354 |
hematopoietic oligopotent progenitor cell | 1.26e-36 | 161 |
hematopoietic multipotent progenitor cell | 1.26e-36 | 161 |
hematopoietic stem cell | 1.34e-35 | 168 |
leukocyte | 4.21e-35 | 136 |
connective tissue cell | 6.88e-35 | 361 |
hematopoietic cell | 6.20e-34 | 177 |
myeloid cell | 7.85e-34 | 108 |
common myeloid progenitor | 7.85e-34 | 108 |
myeloid leukocyte | 9.28e-33 | 72 |
macrophage dendritic cell progenitor | 1.58e-32 | 61 |
hematopoietic lineage restricted progenitor cell | 6.30e-32 | 120 |
monopoietic cell | 2.60e-31 | 59 |
monocyte | 2.60e-31 | 59 |
monoblast | 2.60e-31 | 59 |
promonocyte | 2.60e-31 | 59 |
granulocyte monocyte progenitor cell | 3.20e-31 | 67 |
nongranular leukocyte | 1.28e-30 | 115 |
myeloid lineage restricted progenitor cell | 1.51e-30 | 66 |
motile cell | 1.59e-30 | 386 |
defensive cell | 6.19e-29 | 48 |
phagocyte | 6.19e-29 | 48 |
classical monocyte | 2.71e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-25 | 42 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.61e-34 | 371 |
hematopoietic system | 1.82e-32 | 98 |
blood island | 1.82e-32 | 98 |
hemolymphoid system | 7.94e-31 | 108 |
bone marrow | 2.27e-27 | 76 |
immune system | 1.07e-25 | 93 |
bone element | 1.24e-24 | 82 |
skeletal element | 9.80e-24 | 90 |
skeletal system | 6.56e-22 | 100 |
musculoskeletal system | 2.33e-21 | 167 |
lateral plate mesoderm | 9.66e-21 | 203 |
mesoderm | 3.56e-16 | 315 |
mesoderm-derived structure | 3.56e-16 | 315 |
presumptive mesoderm | 3.56e-16 | 315 |