FFCP PHASE1:Hg19::chr2:113591639..113591658,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3553 | |EntrezGene=3553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5992 | |HGNC=5992 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-487bp_to_ENST00000487639_5end | |association_with_transcript=-487bp_to_ENST00000487639_5end | ||
|cluster_id=chr2:113591639..113591658,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_13_at_IL1B_5end | |description=CAGE_peak_13_at_IL1B_5end | ||
|id=chr2:113591639..113591658,- | |id=chr2:113591639..113591658,- | ||
|ontology_enrichment_celltype=CL:0002057!4.10e-69!42;CL:0000860!4.32e-64!45;CL:0002194!1.04e-46!63;CL:0000576!1.04e-46!63;CL:0000040!1.04e-46!63;CL:0000559!1.04e-46!63;CL:0002009!4.25e-45!65;CL:0000839!1.81e-41!70;CL:0000557!8.36e-41!71;CL:0000766!9.75e-38!76;CL:0002087!1.66e-34!119;CL:0000738!2.85e-30!140;CL:0002031!1.77e-28!124;CL:0000763!9.24e-26!112;CL:0000049!9.24e-26!112;CL:0000037!5.22e-25!172;CL:0000566!5.22e-25!172;CL:0000988!3.20e-23!182;CL:0002032!2.64e-21!165;CL:0000837!2.64e-21!165;CL:0000134!4.03e-13!358;CL:0002320!1.04e-12!365;CL:0000219!4.01e-12!390;CL:0000048!1.66e-09!430;CL:0000723!2.94e-09!436;CL:0000034!6.14e-09!444;CL:0000842!7.60e-07!3 | |ontology_enrichment_celltype=CL:0002057!4.10e-69!42;CL:0000860!4.32e-64!45;CL:0002194!1.04e-46!63;CL:0000576!1.04e-46!63;CL:0000040!1.04e-46!63;CL:0000559!1.04e-46!63;CL:0002009!4.25e-45!65;CL:0000839!1.81e-41!70;CL:0000557!8.36e-41!71;CL:0000766!9.75e-38!76;CL:0002087!1.66e-34!119;CL:0000738!2.85e-30!140;CL:0002031!1.77e-28!124;CL:0000763!9.24e-26!112;CL:0000049!9.24e-26!112;CL:0000037!5.22e-25!172;CL:0000566!5.22e-25!172;CL:0000988!3.20e-23!182;CL:0002032!2.64e-21!165;CL:0000837!2.64e-21!165;CL:0000134!4.03e-13!358;CL:0002320!1.04e-12!365;CL:0000219!4.01e-12!390;CL:0000048!1.66e-09!430;CL:0000723!2.94e-09!436;CL:0000034!6.14e-09!444;CL:0000842!7.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.72e-59;33!CL:0002057;3.72e-59;33!CL:0000473;1.21e-45;39!CL:0000234;1.21e-45;39!CL:0000576;1.15e-35;48!CL:0000766;5.78e-25;69!CL:0002393;8.66e-18;6!CL:0002397;8.66e-18;6!CL:0002087;1.26e-13;104!CL:0000763;2.39e-13;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.72e-74,42;CL:0002057,9.72e-74,42;CL:0000473,2.72e-64,48;CL:0000234,2.72e-64,48;CL:0002194,4.65e-51,59;CL:0000576,4.65e-51,59;CL:0000040,4.65e-51,59;CL:0000559,4.65e-51,59;CL:0002009,2.37e-49,61;CL:0000839,1.59e-45,66;CL:0000557,7.93e-45,67;CL:0000766,1.27e-41,72;CL:0000763,1.07e-30,108;CL:0000049,1.07e-30,108;CL:0002087,1.90e-25,115;CL:0002031,2.61e-24,120;CL:0000738,3.17e-21,136;CL:0002032,5.76e-20,161;CL:0000837,5.76e-20,161;CL:0000037,4.75e-19,168;CL:0000988,5.62e-18,177;CL:0002393,4.68e-12,9;CL:0002397,4.68e-12,9;CL:0000134,7.48e-08,354;CL:0002320,1.18e-07,361;CL:0000219,5.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.82e-55;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.48e-35!80;UBERON:0002390!1.42e-33!102;UBERON:0003061!1.42e-33!102;UBERON:0001474!1.16e-32!86;UBERON:0002193!5.48e-30!112;UBERON:0004765!6.47e-27!101;UBERON:0001434!6.47e-27!101;UBERON:0002405!6.77e-23!115;UBERON:0003081!1.69e-14!216;UBERON:0002204!7.44e-14!167;UBERON:0002384!3.82e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.33e-39,76;UBERON:0001474,2.26e-36,82;UBERON:0004765,5.34e-33,90;UBERON:0002405,7.00e-32,93;UBERON:0002390,3.61e-30,98;UBERON:0003061,3.61e-30,98;UBERON:0001434,1.57e-29,100;UBERON:0002193,3.25e-27,108;UBERON:0002204,6.54e-17,167;UBERON:0003081,1.55e-13,203;UBERON:0000926,6.58e-08,315;UBERON:0004120,6.58e-08,315;UBERON:0006603,6.58e-08,315;UBERON:0002384,2.22e-07,371 | |||
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|short_description=p13@IL1B | |short_description=p13@IL1B | ||
}} | }} |
Latest revision as of 10:59, 16 September 2015
Short description: | p13@IL1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_IL1B_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -487bp_to_ENST00000487639_5end |
EntrezGene: | IL1B |
HGNC: | 5992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.72e-74 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.72e-74 | 42 |
defensive cell | 2.72e-64 | 48 |
phagocyte | 2.72e-64 | 48 |
monopoietic cell | 4.65e-51 | 59 |
monocyte | 4.65e-51 | 59 |
monoblast | 4.65e-51 | 59 |
promonocyte | 4.65e-51 | 59 |
macrophage dendritic cell progenitor | 2.37e-49 | 61 |
myeloid lineage restricted progenitor cell | 1.59e-45 | 66 |
granulocyte monocyte progenitor cell | 7.93e-45 | 67 |
myeloid leukocyte | 1.27e-41 | 72 |
myeloid cell | 1.07e-30 | 108 |
common myeloid progenitor | 1.07e-30 | 108 |
nongranular leukocyte | 1.90e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 2.61e-24 | 120 |
leukocyte | 3.17e-21 | 136 |
hematopoietic oligopotent progenitor cell | 5.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-20 | 161 |
hematopoietic stem cell | 4.75e-19 | 168 |
hematopoietic cell | 5.62e-18 | 177 |
intermediate monocyte | 4.68e-12 | 9 |
CD14-positive, CD16-positive monocyte | 4.68e-12 | 9 |
mesenchymal cell | 7.48e-08 | 354 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 5.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.33e-39 | 76 |
bone element | 2.26e-36 | 82 |
skeletal element | 5.34e-33 | 90 |
immune system | 7.00e-32 | 93 |
hematopoietic system | 3.61e-30 | 98 |
blood island | 3.61e-30 | 98 |
skeletal system | 1.57e-29 | 100 |
hemolymphoid system | 3.25e-27 | 108 |
musculoskeletal system | 6.54e-17 | 167 |
lateral plate mesoderm | 1.55e-13 | 203 |
mesoderm | 6.58e-08 | 315 |
mesoderm-derived structure | 6.58e-08 | 315 |
presumptive mesoderm | 6.58e-08 | 315 |
connective tissue | 2.22e-07 | 371 |