FFCP PHASE1:Hg19::chr2:106776832..106776857,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80146 | |EntrezGene=80146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17729 | |HGNC=17729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000479621_5end | |association_with_transcript=0bp_to_ENST00000479621_5end | ||
|cluster_id=chr2:106776832..106776857,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_5_at_UXS1_5end | |description=CAGE_peak_5_at_UXS1_5end | ||
|id=chr2:106776832..106776857,- | |id=chr2:106776832..106776857,- | ||
|ontology_enrichment_celltype=CL:0000791!2.98e-34!18;CL:0000789!2.98e-34!18;CL:0002420!2.98e-34!18;CL:0002419!2.98e-34!18;CL:0000790!2.98e-34!18;CL:0000838!1.20e-28!52;CL:0000542!6.14e-28!53;CL:0000051!6.14e-28!53;CL:0000084!7.97e-26!25;CL:0000827!7.97e-26!25;CL:0000625!3.52e-24!11;CL:0000037!6.69e-17!172;CL:0000566!6.69e-17!172;CL:0002087!5.08e-16!119;CL:0000988!2.90e-15!182;CL:0000738!7.98e-15!140;CL:0000624!5.33e-14!6;CL:0002032!1.84e-13!165;CL:0000837!1.84e-13!165;CL:0002031!5.04e-12!124;CL:0000898!2.77e-08!3;CL:0000623!4.13e-07!3;CL:0000825!4.13e-07!3;CL:0000842!5.44e-07!3;CL:0000236!9.19e-07!14 | |ontology_enrichment_celltype=CL:0000791!2.98e-34!18;CL:0000789!2.98e-34!18;CL:0002420!2.98e-34!18;CL:0002419!2.98e-34!18;CL:0000790!2.98e-34!18;CL:0000838!1.20e-28!52;CL:0000542!6.14e-28!53;CL:0000051!6.14e-28!53;CL:0000084!7.97e-26!25;CL:0000827!7.97e-26!25;CL:0000625!3.52e-24!11;CL:0000037!6.69e-17!172;CL:0000566!6.69e-17!172;CL:0002087!5.08e-16!119;CL:0000988!2.90e-15!182;CL:0000738!7.98e-15!140;CL:0000624!5.33e-14!6;CL:0002032!1.84e-13!165;CL:0000837!1.84e-13!165;CL:0002031!5.04e-12!124;CL:0000898!2.77e-08!3;CL:0000623!4.13e-07!3;CL:0000825!4.13e-07!3;CL:0000842!5.44e-07!3;CL:0000236!9.19e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.95e-60;18!CL:0000789;9.95e-60;18!CL:0002419;9.95e-60;18!CL:0000625;1.00e-43;11!CL:0000084;4.40e-42;25!CL:0000624;2.81e-21;6!CL:0000898;1.34e-16;3!CL:0000542;2.68e-15;53!CL:0000815;1.12e-11;2!CL:0000792;1.12e-11;2!CL:0002677;1.12e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.78e-59,18;CL:0000789,1.78e-59,18;CL:0002420,1.78e-59,18;CL:0002419,1.78e-59,18;CL:0000790,1.78e-59,18;CL:0000625,1.42e-43,11;CL:0000084,6.65e-42,25;CL:0000827,6.65e-42,25;CL:0000838,4.78e-27,52;CL:0000542,1.85e-26,53;CL:0000051,1.85e-26,53;CL:0000624,3.64e-21,6;CL:0000898,1.34e-16,3;CL:0000815,1.01e-11,2;CL:0000792,1.01e-11,2;CL:0002677,1.01e-11,2;CL:0002087,6.13e-10,115;CL:0002031,2.27e-09,120;CL:0000738,7.76e-08,136;CL:0002032,6.14e-07,161;CL:0000837,6.14e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;9.95e-60;18!CL:0000051;2.68e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.93e-08!15;UBERON:0000179!2.93e-08!15;UBERON:0000463!2.93e-08!15;UBERON:0004177!5.98e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@UXS1 | |short_description=p5@UXS1 | ||
}} | }} |
Latest revision as of 05:08, 16 September 2015
Short description: | p5@UXS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UXS1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000479621_5end |
EntrezGene: | UXS1 |
HGNC: | 17729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.78e-59 | 18 |
alpha-beta T cell | 1.78e-59 | 18 |
immature T cell | 1.78e-59 | 18 |
mature T cell | 1.78e-59 | 18 |
immature alpha-beta T cell | 1.78e-59 | 18 |
CD8-positive, alpha-beta T cell | 1.42e-43 | 11 |
T cell | 6.65e-42 | 25 |
pro-T cell | 6.65e-42 | 25 |
lymphoid lineage restricted progenitor cell | 4.78e-27 | 52 |
lymphocyte | 1.85e-26 | 53 |
common lymphoid progenitor | 1.85e-26 | 53 |
CD4-positive, alpha-beta T cell | 3.64e-21 | 6 |
naive T cell | 1.34e-16 | 3 |
regulatory T cell | 1.01e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.01e-11 | 2 |
naive regulatory T cell | 1.01e-11 | 2 |
nongranular leukocyte | 6.13e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.27e-09 | 120 |
leukocyte | 7.76e-08 | 136 |
hematopoietic oligopotent progenitor cell | 6.14e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.14e-07 | 161 |