FFCP PHASE1:Hg19::chr17:61571793..61571795,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:61571793..61571795,+ | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_at_chr17:61571793..61571795,+ | |description=CAGE_peak_at_chr17:61571793..61571795,+ | ||
|id=chr17:61571793..61571795,+ | |id=chr17:61571793..61571795,+ | ||
|ontology_enrichment_celltype=CL:0002570!9.42e-09!8;CL:0000115!1.86e-07!35;CL:0000666!2.09e-07!4;CL:0002188!2.09e-07!4;CL:1000612!8.63e-07!7;CL:1000746!8.63e-07!7 | |ontology_enrichment_celltype=CL:0002570!9.42e-09!8;CL:0000115!1.86e-07!35;CL:0000666!2.09e-07!4;CL:0002188!2.09e-07!4;CL:1000612!8.63e-07!7;CL:1000746!8.63e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002188;6.15e-17;5!CL:0000235;3.71e-14;6!CL:1000746;2.18e-12;7!CL:1000612;2.18e-12;7!CL:0002570;5.55e-11;8!CL:0002681;1.31e-07;12!CL:0002584;1.31e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,4.64e-17,5;CL:0000235,3.71e-14,6;CL:1000746,1.78e-12,7;CL:1000612,1.78e-12,7;CL:0002570,6.61e-11,8;CL:0002681,1.16e-07,12;CL:0002584,1.16e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000074!8.63e-07!7;UBERON:0001229!8.63e-07!7;UBERON:0001230!8.63e-07!7;UBERON:0005749!8.63e-07!7;UBERON:0004199!8.63e-07!7;UBERON:0004209!8.63e-07!7;UBERON:0004198!8.63e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;4.66e-21;1!UBERON:0005352;4.66e-21;1!UBERON:0000074;2.18e-12;7!UBERON:0001229;2.18e-12;7!UBERON:0003135;3.76e-08;11!UBERON:0006947;6.56e-08;3!UBERON:0004054;6.56e-08;3!UBERON:0001225;1.31e-07;12!UBERON:0008987;1.31e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,7.72e-21,1;UBERON:0005352,7.72e-21,1;UBERON:0010532,1.78e-12,7;UBERON:0000074,1.78e-12,7;UBERON:0001229,1.78e-12,7;UBERON:0001230,1.78e-12,7;UBERON:0003220,1.78e-12,7;UBERON:0005749,1.78e-12,7;UBERON:0004199,1.78e-12,7;UBERON:0004209,1.78e-12,7;UBERON:0004198,1.78e-12,7;UBERON:0005103,4.90e-11,8;UBERON:0000083,4.90e-11,8;UBERON:0009201,4.90e-11,8;UBERON:0006553,4.90e-11,8;UBERON:0003074,4.90e-11,8;UBERON:0003060,4.90e-11,8;UBERON:0000058,4.30e-10,19;UBERON:0000080,6.48e-10,9;UBERON:0002120,6.48e-10,9;UBERON:0004875,6.48e-10,9;UBERON:0005721,6.48e-10,9;UBERON:0005754,6.48e-10,9;UBERON:0007297,6.48e-10,9;UBERON:0004876,2.82e-08,11;UBERON:0003135,3.76e-08,11;UBERON:0006947,7.76e-08,3;UBERON:0004054,7.76e-08,3;UBERON:0001225,1.16e-07,12;UBERON:0008987,1.16e-07,12;UBERON:0003887,1.16e-07,12 | |||
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| ||
|short_description=p@chr17:61571793..61571795,+ | |short_description=p@chr17:61571793..61571795,+ | ||
}} | }} |
Latest revision as of 19:44, 25 July 2015
Short description: | p@chr17:61571793..61571795, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:61571793..61571795, + |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 4.64e-17 | 5 |
macrophage | 3.71e-14 | 6 |
glomerular cell | 1.78e-12 | 7 |
kidney corpuscule cell | 1.78e-12 | 7 |
mesenchymal stem cell of adipose | 6.61e-11 | 8 |
kidney cortical cell | 1.16e-07 | 12 |
renal cortical epithelial cell | 1.16e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 7.72e-21 | 1 |
spermatic cord | 7.72e-21 | 1 |
primitive nephron | 1.78e-12 | 7 |
renal glomerulus | 1.78e-12 | 7 |
renal corpuscle | 1.78e-12 | 7 |
glomerular capsule | 1.78e-12 | 7 |
metanephric mesenchyme | 1.78e-12 | 7 |
glomerular tuft | 1.78e-12 | 7 |
S-shaped body | 1.78e-12 | 7 |
renal vesicle | 1.78e-12 | 7 |
comma-shaped body | 1.78e-12 | 7 |
mesonephric epithelium | 4.90e-11 | 8 |
mesonephric tubule | 4.90e-11 | 8 |
nephric duct | 4.90e-11 | 8 |
renal duct | 4.90e-11 | 8 |
mesonephric duct | 4.90e-11 | 8 |
pronephric duct | 4.90e-11 | 8 |
duct | 4.30e-10 | 19 |
mesonephros | 6.48e-10 | 9 |
pronephros | 6.48e-10 | 9 |
nephrogenic cord | 6.48e-10 | 9 |
pronephric mesoderm | 6.48e-10 | 9 |
rostral part of nephrogenic cord | 6.48e-10 | 9 |
presumptive pronephric mesoderm | 6.48e-10 | 9 |
urogenital ridge | 2.82e-08 | 11 |
male reproductive organ | 3.76e-08 | 11 |
male genital duct | 7.76e-08 | 3 |
internal male genitalia | 7.76e-08 | 3 |
cortex of kidney | 1.16e-07 | 12 |
renal parenchyma | 1.16e-07 | 12 |
intraembryonic coelom | 1.16e-07 | 12 |