FFCP PHASE1:Hg19::chr11:7660906..7660910,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:7660906..7660910,+
|short_description=p17@PPFIBP2
|description=CAGE_peak_17_at_PPFIBP2_5end
|association_with_transcript=-52bp_to_ENST00000532172_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8495 | |EntrezGene=8495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9250 | |HGNC=9250 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_ENST00000532172_5end | |||
|cluster_id=chr11:7660906..7660910,+ | |||
|coexpression_cluster_id=C3202 | |||
|description=CAGE_peak_17_at_PPFIBP2_5end | |||
|id=chr11:7660906..7660910,+ | |||
|ontology_enrichment_celltype=CL:0002368!9.37e-10!13;CL:0002202!5.12e-08!9;CL:0002632!5.12e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002202;2.68e-32;9!CL:0002632;2.68e-32;9!CL:0002368;3.49e-30;13!CL:0000307;2.27e-25;3!CL:0002328;4.73e-25;3!CL:0000136;5.89e-10;13!CL:0000312;2.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.55e-32,9;CL:0002632,2.55e-32,9;CL:0002368,3.36e-30,13;CL:0002328,2.37e-25,3;CL:0000068,4.21e-25,3;CL:0000069,4.21e-25,3;CL:0000307,4.21e-25,3;CL:0000377,4.21e-25,3;CL:0002076,8.15e-09,42;CL:0000136,1.06e-08,15;CL:0000312,2.01e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;2.27e-25;3 | |||
|ontology_enrichment_disease=DOID:305!6.89e-09!106;DOID:162!6.63e-08!235;DOID:14566!2.11e-07!239;DOID:0050687!3.24e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.73e-25;3!UBERON:0002031;4.73e-25;3!UBERON:0007196;3.19e-19;15!UBERON:0001558;3.19e-19;15!UBERON:0002185;2.79e-15;5!UBERON:0003126;3.33e-11;7!UBERON:0001005;3.33e-11;7!UBERON:0000485;4.54e-11;7!UBERON:0005178;2.38e-08;34!UBERON:0002224;2.38e-08;34!UBERON:0005181;1.77e-07;35!UBERON:0000072;3.26e-07;37!UBERON:0000065;4.33e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.37e-25,3;UBERON:0002031,2.37e-25,3;UBERON:0007196,3.10e-19,15;UBERON:0001558,3.10e-19,15;UBERON:0002185,1.86e-15,5;UBERON:0003126,4.32e-11,7;UBERON:0001005,4.32e-11,7;UBERON:0000485,8.15e-09,9;UBERON:0005178,3.25e-08,34;UBERON:0002224,3.25e-08,34;UBERON:0005181,5.78e-08,35;UBERON:0008947,2.71e-07,38;UBERON:0003258,2.71e-07,38 | |||
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| ||
|short_description=p17@PPFIBP2 | |||
}} | }} |
Latest revision as of 08:45, 20 September 2015
Short description: | p17@PPFIBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PPFIBP2_5end |
Coexpression cluster: | C3202_Tracheal_Small_squamous_Bronchial_hairy_Mammary_Keratinocyte |
Association with transcript: | -52bp_to_ENST00000532172_5end |
EntrezGene: | PPFIBP2 |
HGNC: | 9250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.55e-32 | 9 |
epithelial cell of lower respiratory tract | 2.55e-32 | 9 |
respiratory epithelial cell | 3.36e-30 | 13 |
bronchial epithelial cell | 2.37e-25 | 3 |
duct epithelial cell | 4.21e-25 | 3 |
branched duct epithelial cell | 4.21e-25 | 3 |
tracheal epithelial cell | 4.21e-25 | 3 |
tracheoblast | 4.21e-25 | 3 |
endo-epithelial cell | 8.15e-09 | 42 |
fat cell | 1.06e-08 | 15 |
keratinocyte | 2.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.37e-25 | 3 |
epithelium of bronchus | 2.37e-25 | 3 |
tracheobronchial tree | 3.10e-19 | 15 |
lower respiratory tract | 3.10e-19 | 15 |
bronchus | 1.86e-15 | 5 |
trachea | 4.32e-11 | 7 |
respiratory airway | 4.32e-11 | 7 |
simple columnar epithelium | 8.15e-09 | 9 |
thoracic cavity element | 3.25e-08 | 34 |
thoracic cavity | 3.25e-08 | 34 |
thoracic segment organ | 5.78e-08 | 35 |
respiratory primordium | 2.71e-07 | 38 |
endoderm of foregut | 2.71e-07 | 38 |