FFCP PHASE1:Hg19::chr2:101889505..101889509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=692205 | |EntrezGene=692205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32750 | |HGNC=32750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000390981,NR_003070,uc002tay.1_5end | |association_with_transcript=1bp_to_ENST00000390981,NR_003070,uc002tay.1_5end | ||
|cluster_id=chr2:101889505..101889509,- | |||
|coexpression_cluster_id=C673 | |||
|description=CAGE_peak_1_at_SNORD89_5end | |description=CAGE_peak_1_at_SNORD89_5end | ||
|id=chr2:101889505..101889509,- | |id=chr2:101889505..101889509,- | ||
|ontology_enrichment_celltype=CL:0002087!1.72e-07!119;CL:0000738!6.51e-07!140 | |ontology_enrichment_celltype=CL:0002087!1.72e-07!119;CL:0000738!6.51e-07!140 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-12!115;UBERON:0001049!6.05e-12!57;UBERON:0005068!6.05e-12!57;UBERON:0006241!6.05e-12!57;UBERON:0007135!6.05e-12!57;UBERON:0003080!7.55e-11!42;UBERON:0002780!2.20e-10!41;UBERON:0001890!2.20e-10!41;UBERON:0006240!2.20e-10!41;UBERON:0002020!4.70e-09!34;UBERON:0003528!4.70e-09!34;UBERON:0001893!1.00e-08!34;UBERON:0002791!1.05e-08!33;UBERON:0002616!2.30e-08!59;UBERON:0001869!6.20e-08!32;UBERON:0002619!9.02e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.38e-12;22!UBERON:0002791;4.46e-12;32!UBERON:0003528;1.84e-11;34!UBERON:0002020;1.84e-11;34!UBERON:0001950;5.98e-11;20!UBERON:0000956;1.09e-10;25!UBERON:0000203;1.09e-10;25!UBERON:0001893;5.33e-10;34!UBERON:0001869;5.67e-10;32!UBERON:0000073;2.08e-09;53!UBERON:0002616;2.08e-09;53!UBERON:0002780;8.16e-08;41!UBERON:0001890;8.16e-08;41!UBERON:0002771;1.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.31e-16,56;UBERON:0005068,8.31e-16,56;UBERON:0006241,8.31e-16,56;UBERON:0007135,8.31e-16,56;UBERON:0003528,4.60e-15,34;UBERON:0002020,4.60e-15,34;UBERON:0000073,5.97e-15,53;UBERON:0002616,5.97e-15,53;UBERON:0002791,7.24e-14,32;UBERON:0001893,6.67e-13,34;UBERON:0002619,3.44e-12,22;UBERON:0002780,4.71e-12,41;UBERON:0001890,4.71e-12,41;UBERON:0003080,4.71e-12,41;UBERON:0006240,4.71e-12,41;UBERON:0001869,1.04e-11,32;UBERON:0002346,4.05e-11,86;UBERON:0001950,8.68e-11,20;UBERON:0001017,1.24e-10,81;UBERON:0003075,1.29e-10,82;UBERON:0007284,1.29e-10,82;UBERON:0000956,1.50e-10,25;UBERON:0000203,1.50e-10,25;UBERON:0000955,1.55e-10,68;UBERON:0006238,1.55e-10,68;UBERON:0001016,3.95e-09,89;UBERON:0007023,1.57e-08,114;UBERON:0002771,8.03e-08,2;UBERON:0010371,2.00e-07,104;UBERON:0003056,3.70e-07,61 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.305653622991805,0,0.157421562627358,0,0.767658796194425,0.309632246632152,0.919421224478927,0,0,0.154934401160603,0.142169232487422,0,0,1.20326668482085,2.82114131930607,0.447830948479849,0.647787332037959,0.257575567634187,0.290796477559129,0,0,0.232429036905685,1.23350366406548,0.309706370895104,0.28769239232215,0.768482119587302,0.945928919554341,1.03423704220986,0,0,0.564727018627814,0.545812300115692,0.674170453335254,0.612167784741805,0.320929027076094,0,0,0,0,0.870627715885752,0,0,0.502497330513487,1.0429658368404,0.217188844705117,1.81619850790011,0,0,0.845021145247767,0.212604299965044,0.209658645508376,0.22465726229299,0,0.48217676009124,1.14005097496499,0,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,0,0,0.764546456250458,0,0,0.263384084775077,1.37696839079683,23.973656527699,1.85041349099558,0.334372990781356,0,0,1.94826728407911,0.111410456885174,0.589211814949674,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0.226618685395132,0.766440987203842,0.34362744548263,1.01207876807801,0.318565414324097,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,6.15112450302067,1.73789284659359,0,0,0,0,0,0,0,0.486634870302636,0,0,0.175669571386252,0.261958150995425,0,0,0,0,1.59549552622638,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.404493924480493,0,0,0,0,0,0,3.80265104465493,0.982827216677626,0,0,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,0,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,3.381211010224,0,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.448340575974109,0.394061520403854,3.23441362289276,1.79680250791648,0,0,1.54657762555539,0,0,1.49801404789436,11.966458368161,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.347534457872331,0,0,0,1.72571360654893,1.70764092485511,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0.462629081407967,0.355123450626254,0,0,0,0.483437798366489,0.40101294060657,0.368323955743585,0.114814448164607,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0.188287601553558,0.43050537267123,1.68471475667626,0.443430153536676,0,0,0,1.70894156152249,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0.456469358066384,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0.66866030566487,0,0,0,0.307160702099232,0.994147647766298,0.844016498463076,0.333926115068718,0.16480387422676,0.422250816255987,1.79323189425963,0.276283915531148,0.251932747854276,0,0,0.311039587661807,0,0.179021174675609,0,0.197286811273867,9.57932369387759,0,0,0.0927680981618513,0,0,0.0874599999961957,0.724999575434793,0.227586896570999,0,0.236387681767936,0,0.291604613383254,0.347249989866585,0.885741385813839,0.723578631752448,0,1.43753037910592,1.18219047581419,0,0,0.139423744278603,0.384751292518985,0,0,0.628303510868405,0.325942115766024,0,0.0915975934018623,1.06606955203727,1.02193298195737,0,0,0,0.19606253431774,0,0,0.317873157960757,0,0.326465616318295,0.282706142867882,0.216388639742091,0,0.0884575645033392,1.22206028986725,0,0.123563938946503,0,0.269604531922708,0,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0.146178634172371,0.328461828212837,0.387956065953678,0.0882561266915003,1.12990370390266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| 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| ||
|short_description=p1@SNORD89 | |short_description=p1@SNORD89 | ||
}} | }} |
Latest revision as of 23:51, 15 September 2015
Short description: | p1@SNORD89 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD89_5end |
Coexpression cluster: | C673_CD4_Neutrophils_blood_CD8_skeletal_parietal_temporal |
Association with transcript: | 1bp_to_ENST00000390981, NR_003070, uc002tay.1_5end |
EntrezGene: | SNORD89 |
HGNC: | 32750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 8.31e-16 | 56 |
neural rod | 8.31e-16 | 56 |
future spinal cord | 8.31e-16 | 56 |
neural keel | 8.31e-16 | 56 |
brain grey matter | 4.60e-15 | 34 |
gray matter | 4.60e-15 | 34 |
regional part of nervous system | 5.97e-15 | 53 |
regional part of brain | 5.97e-15 | 53 |
regional part of telencephalon | 7.24e-14 | 32 |
telencephalon | 6.67e-13 | 34 |
regional part of cerebral cortex | 3.44e-12 | 22 |
regional part of forebrain | 4.71e-12 | 41 |
forebrain | 4.71e-12 | 41 |
anterior neural tube | 4.71e-12 | 41 |
future forebrain | 4.71e-12 | 41 |
cerebral hemisphere | 1.04e-11 | 32 |
neurectoderm | 4.05e-11 | 86 |
neocortex | 8.68e-11 | 20 |
central nervous system | 1.24e-10 | 81 |
neural plate | 1.29e-10 | 82 |
presumptive neural plate | 1.29e-10 | 82 |
cerebral cortex | 1.50e-10 | 25 |
pallium | 1.50e-10 | 25 |
brain | 1.55e-10 | 68 |
future brain | 1.55e-10 | 68 |
nervous system | 3.95e-09 | 89 |
adult organism | 1.57e-08 | 114 |
middle temporal gyrus | 8.03e-08 | 2 |
ecto-epithelium | 2.00e-07 | 104 |
pre-chordal neural plate | 3.70e-07 | 61 |