FFCP PHASE1:Hg19::chr22:51158914..51158921,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85358 | |EntrezGene=85358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14294 | |HGNC=14294 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYB0 | |UniProt=Q9BYB0 | ||
|association_with_transcript=-141bp_to_AB051437_5end | |association_with_transcript=-141bp_to_AB051437_5end | ||
|cluster_id=chr22:51158914..51158921,+ | |||
|coexpression_cluster_id=C586 | |||
|description=CAGE_peak_13_at_SHANK3_5end | |description=CAGE_peak_13_at_SHANK3_5end | ||
|id=chr22:51158914..51158921,+ | |id=chr22:51158914..51158921,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.04e-34;3!UBERON:0006238;2.27e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.01e-22!57;UBERON:0005068!1.01e-22!57;UBERON:0006241!1.01e-22!57;UBERON:0007135!1.01e-22!57;UBERON:0000955!1.68e-22!69;UBERON:0006238!1.68e-22!69;UBERON:0002616!7.91e-22!59;UBERON:0001950!3.01e-21!20;UBERON:0001017!1.84e-20!82;UBERON:0005743!2.60e-19!86;UBERON:0002619!3.09e-19!22;UBERON:0001869!1.71e-18!32;UBERON:0003075!1.44e-17!86;UBERON:0007284!1.44e-17!86;UBERON:0002020!2.31e-17!34;UBERON:0003528!2.31e-17!34;UBERON:0001893!2.70e-17!34;UBERON:0000073!4.50e-17!94;UBERON:0001016!4.50e-17!94;UBERON:0000956!8.49e-17!25;UBERON:0000203!8.49e-17!25;UBERON:0007023!8.88e-17!115;UBERON:0002346!1.35e-16!90;UBERON:0002780!1.80e-16!41;UBERON:0001890!1.80e-16!41;UBERON:0006240!1.80e-16!41;UBERON:0003080!5.03e-16!42;UBERON:0002791!4.72e-15!33;UBERON:0000153!3.16e-14!129;UBERON:0007811!3.16e-14!129;UBERON:0000033!1.32e-13!123;UBERON:0003056!2.75e-10!61;UBERON:0004733!4.78e-10!12;UBERON:0002028!4.78e-10!12;UBERON:0007277!4.78e-10!12;UBERON:0001871!6.08e-10!7;UBERON:0004121!1.25e-09!169;UBERON:0001872!1.26e-09!5;UBERON:0000924!2.68e-09!173;UBERON:0006601!2.68e-09!173;UBERON:0004732!2.98e-09!13;UBERON:0000064!4.87e-08!219;UBERON:0003076!5.59e-08!15;UBERON:0003057!5.59e-08!15;UBERON:0000200!1.25e-07!6;UBERON:0002771!2.06e-07!3;UBERON:0001896!3.11e-07!3;UBERON:0005290!3.11e-07!3;UBERON:0010096!3.11e-07!3;UBERON:0000477!5.35e-07!286;UBERON:0000025!5.40e-07!194;UBERON:0004111!7.43e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.34e-18;6!UBERON:0002680;2.31e-12;9!UBERON:0001895;2.31e-12;9!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p13@SHANK3 | |short_description=p13@SHANK3 | ||
}} | }} |
Latest revision as of 22:14, 15 September 2015
Short description: | p13@SHANK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SHANK3_5end |
Coexpression cluster: | C586_cerebellum_brain_occipital_middle_parietal_medial_amygdala |
Association with transcript: | -141bp_to_AB051437_5end |
EntrezGene: | SHANK3 |
HGNC: | 14294 |
UniProt: | Q9BYB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |