FFCP PHASE1:Hg19::chr22:50970041..50970067,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440836 | |EntrezGene=440836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34388 | |HGNC=34388 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000469660_5end | |association_with_transcript=40bp_to_ENST00000469660_5end | ||
|cluster_id=chr22:50970041..50970067,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_ODF3B_5end | |description=CAGE_peak_4_at_ODF3B_5end | ||
|id=chr22:50970041..50970067,- | |id=chr22:50970041..50970067,- | ||
|ontology_enrichment_celltype=CL:0000738!1.86e-44!140;CL:0002031!2.25e-34!124;CL:0000037!9.92e-34!172;CL:0000566!9.92e-34!172;CL:0002087!2.88e-33!119;CL:0002032!6.70e-32!165;CL:0000837!6.70e-32!165;CL:0000988!2.64e-31!182;CL:0002057!1.98e-29!42;CL:0000860!9.86e-29!45;CL:0000766!3.20e-28!76;CL:0000557!6.12e-23!71;CL:0000839!1.54e-22!70;CL:0002009!7.11e-22!65;CL:0002194!9.13e-21!63;CL:0000576!9.13e-21!63;CL:0000040!9.13e-21!63;CL:0000559!9.13e-21!63;CL:0000763!3.92e-20!112;CL:0000049!3.92e-20!112;CL:0000945!3.43e-11!24;CL:0000826!3.43e-11!24;CL:0000542!6.58e-11!53;CL:0000051!6.58e-11!53;CL:0000838!8.95e-11!52;CL:0002393!6.34e-08!9;CL:0002397!6.34e-08!9;CL:0000094!1.38e-07!8;CL:0000236!7.79e-07!14 | |ontology_enrichment_celltype=CL:0000738!1.86e-44!140;CL:0002031!2.25e-34!124;CL:0000037!9.92e-34!172;CL:0000566!9.92e-34!172;CL:0002087!2.88e-33!119;CL:0002032!6.70e-32!165;CL:0000837!6.70e-32!165;CL:0000988!2.64e-31!182;CL:0002057!1.98e-29!42;CL:0000860!9.86e-29!45;CL:0000766!3.20e-28!76;CL:0000557!6.12e-23!71;CL:0000839!1.54e-22!70;CL:0002009!7.11e-22!65;CL:0002194!9.13e-21!63;CL:0000576!9.13e-21!63;CL:0000040!9.13e-21!63;CL:0000559!9.13e-21!63;CL:0000763!3.92e-20!112;CL:0000049!3.92e-20!112;CL:0000945!3.43e-11!24;CL:0000826!3.43e-11!24;CL:0000542!6.58e-11!53;CL:0000051!6.58e-11!53;CL:0000838!8.95e-11!52;CL:0002393!6.34e-08!9;CL:0002397!6.34e-08!9;CL:0000094!1.38e-07!8;CL:0000236!7.79e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.68e-34;33!CL:0002057;7.68e-34;33!CL:0000576;8.62e-26;48!CL:0000473;1.36e-22;39!CL:0000234;1.36e-22;39!CL:0000766;1.48e-20;69!CL:0002087;6.61e-15;104!CL:0000945;4.12e-14;24!CL:0000738;3.33e-13;136!CL:0000094;3.27e-12;8!CL:0000081;5.29e-10;11!CL:0002393;3.36e-09;6!CL:0002397;3.36e-09;6!CL:0000236;3.40e-09;13!CL:0000763;3.91e-09;100!CL:0000988;9.33e-08;177!CL:0000542;6.43e-07;53!CL:0000219;9.06e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.24e-60,136;CL:0000860,1.50e-48,42;CL:0002057,1.50e-48,42;CL:0000037,1.87e-45,168;CL:0002087,2.20e-43,115;CL:0000766,4.04e-43,72;CL:0002031,7.15e-43,120;CL:0000988,1.14e-42,177;CL:0002032,9.00e-42,161;CL:0000837,9.00e-42,161;CL:0000473,1.72e-40,48;CL:0000234,1.72e-40,48;CL:0000557,1.49e-34,67;CL:0002009,1.84e-34,61;CL:0002194,1.56e-32,59;CL:0000576,1.56e-32,59;CL:0000040,1.56e-32,59;CL:0000559,1.56e-32,59;CL:0000839,6.47e-32,66;CL:0000763,9.46e-31,108;CL:0000049,9.46e-31,108;CL:0000945,2.62e-14,24;CL:0000826,2.62e-14,24;CL:0002393,1.10e-12,9;CL:0002397,1.10e-12,9;CL:0000094,4.26e-12,8;CL:0000134,6.87e-11,354;CL:0000838,2.34e-10,52;CL:0000236,2.94e-10,14;CL:0002320,3.48e-10,361;CL:0000542,5.12e-10,53;CL:0000051,5.12e-10,53;CL:0000081,7.61e-10,11;CL:0000219,3.69e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-34;42!CL:0000049;9.28e-09;108!CL:0000051;6.43e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.85e-28!102;UBERON:0003061!2.85e-28!102;UBERON:0002193!3.27e-24!112;UBERON:0002371!1.78e-18!80;UBERON:0001474!8.67e-16!86;UBERON:0002405!8.28e-15!115;UBERON:0004765!4.48e-12!101;UBERON:0001434!4.48e-12!101;UBERON:0000178!2.50e-09!15;UBERON:0000179!2.50e-09!15;UBERON:0000463!2.50e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.89e-12;15!UBERON:0000179;4.89e-12;15!UBERON:0000463;4.89e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-40,98;UBERON:0003061,1.39e-40,98;UBERON:0002193,4.73e-36,108;UBERON:0002371,3.62e-30,76;UBERON:0001474,9.73e-27,82;UBERON:0002405,5.91e-26,93;UBERON:0004765,6.61e-23,90;UBERON:0001434,5.48e-20,100;UBERON:0003081,4.13e-12,203;UBERON:0000178,5.79e-12,15;UBERON:0000179,5.79e-12,15;UBERON:0000463,5.79e-12,15;UBERON:0002384,3.07e-09,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,3.05653622991805,2.54511827294832,2.75487734597877,8.65401409067589,2.30297638858328,4.02521920621798,1.83884244895785,0.30120591877825,1.10926203050036,0.46480320348181,2.55904618477359,0,3.87796785972314,7.62068900386538,6.72733699219141,0.223915474239924,0.32389366601898,0,4.21654892460738,4.91238726795452,2.42584061187816,3.0215774797739,1.6446715520873,4.02618282163635,4.60307827715441,6.14785695669842,5.20260905754887,5.5159308917859,3.87290810150296,2.70852973188684,3.38836211176688,3.27487380069415,0.674170453335254,2.75475503133812,2.56743221660875,5.11469700639233,3.62836430205388,5.78444607102732,6.39337125799041,4.35313857942876,2.8369261234557,3.11411124497787,5.7787193009051,3.65038042894141,4.34377689410233,3.63239701580021,4.05105399586321,2.84816148696796,3.80259515361495,7.01594189884644,5.87044207423452,5.72876018847125,6.75796017786778,4.66104201421532,3.70516566863623,3.77941686678271,3.47061892152804,5.27988733383968,5.46138611262132,1.77901850772711,1.28019066769952,2.80277190925209,3.4485146397269,4.62731410949403,0.954053754535364,9.10740750575117,6.45960908308033,8.79228424688026,0,3.36305137788922,0,0.196709770113833,0.786021525498329,3.08402248499264,0.83593247695339,0,0.946895611469467,0,2.1167986808183,0,1.32920336750173,1.08321545506006,2.0494611156108,4.1618991219161,2.30213066445147,2.48715016007264,1.44901542867526,0,0,0,0.453237370790265,1.14966148080576,0.34362744548263,1.51811815211702,0,0,0,0.903450714466637,0.511946444617674,0,0.236777252044017,0.821127996921047,1.00803371612366,1.87208137048455,0.724122019413995,0,0,0.12786256184353,0,1.00267582127178,0.289693037921647,0,0.486634870302636,0,0,0.087834785693126,0.458426764241994,1.45718115317017,0.741568885568859,0,0.174129737299267,0.26591592103773,2.38490624305342,2.85997455390064,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,25.038279312852,19.3890132074163,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.269662616320329,0,0.769494313892781,0,0,0,0,3.80265104465493,1.96565443335525,3.54473944008842,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0.567100388969546,0,0,0,0.985326475791887,0.264145302039678,1.65862492432618,1.44119953416961,2.39860623510122,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0.784596007954691,1.18218456121156,1.94064817373566,1.92514554419623,0,0,0.773288812777695,0,0,17.2271615507852,17.9496875522415,21.5496066986738,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,3.3082884179662,7.54999702865159,2.66818894508611,0,3.32870879020994,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.736647911487171,0,0,0,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,1.854738209659,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0.322260734604821,0.145016693914229,0,0,0.661139661443912,1.34533047155574,1.40373983744043,2.2254711788221,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0.422215270595328,1.64647446479951,0,0,0.192444225451024,0,1.08890984861323,1.41215701165169,0.43050537267123,5.05414427002877,0.886860307073351,0,4.56702848308952,1.52927441428475,1.13929437434833,1.42939065274673,4.52498500394814,3.24236655596359,2.70015718619057,4.75875105776562,0,0,0.490080431962063,0.371606350251437,0,0,0,0,0,0,0,0.280797178113459,0,0.313359791546046,0,0,0.481764225311099,0.201799707191048,2.98092366383228,0.343505344755765,1.53620382154229,0,0.667396566847634,0,0,0,0,0,0,1.8714054040822,0.146508179271894,0,1.44876399560722,0,0.47748896947538,0.296964680832639,0.921482106297696,0,0,1.33570446027487,0.329607748453519,0,0.398495976502139,0.828851746593443,0.251932747854276,0,2.70786572014353,0,0.0898683511473268,1.43216939740487,2.04628948090749,0.0986434056369336,4.7896618469388,0,0,0.0927680981618513,0,0,5.24759999977174,0,0.341380344856499,0.762760950878299,2.36387681767936,0.689486746482929,0.583209226766509,0.173624994933292,0,0.120596438625408,0,0.110579259931225,2.36438095162838,0,0,0.139423744278603,0.307801034015188,0,0,0,0.977826347298073,1.27600463892768,0.183195186803725,1.06606955203727,0,0,0.332423363800313,0,0,0,0,0,0.421996129056054,0,0,0,0,0.265372693510018,0.6110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| ||
|short_description=p4@ODF3B | |short_description=p4@ODF3B | ||
}} | }} |
Latest revision as of 21:06, 15 September 2015
Short description: | p4@ODF3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ODF3B_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 40bp_to_ENST00000469660_5end |
EntrezGene: | ODF3B |
HGNC: | 34388 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-40 | 98 |
blood island | 1.39e-40 | 98 |
hemolymphoid system | 4.73e-36 | 108 |
bone marrow | 3.62e-30 | 76 |
bone element | 9.73e-27 | 82 |
immune system | 5.91e-26 | 93 |
skeletal element | 6.61e-23 | 90 |
skeletal system | 5.48e-20 | 100 |
lateral plate mesoderm | 4.13e-12 | 203 |
blood | 5.79e-12 | 15 |
haemolymphatic fluid | 5.79e-12 | 15 |
organism substance | 5.79e-12 | 15 |
connective tissue | 3.07e-09 | 371 |