FFCP PHASE1:Hg19::chr17:56494969..56494972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54894 | |EntrezGene=54894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18505 | |HGNC=18505 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DV7 | |UniProt=Q68DV7 | ||
|association_with_transcript=-38bp_to_NM_017763,uc002iwg.3,uc002iwh.3,uc010dcw.2_5end | |association_with_transcript=-38bp_to_NM_017763,uc002iwg.3,uc002iwh.3,uc010dcw.2_5end | ||
|cluster_id=chr17:56494969..56494972,- | |||
|description=CAGE_peak_7_at_RNF43_5end | |description=CAGE_peak_7_at_RNF43_5end | ||
|id=chr17:56494969..56494972,- | |id=chr17:56494969..56494972,- | ||
|ontology_enrichment_celltype=CL:0002076!2.60e-08!43;CL:0000223!2.91e-08!59;CL:0002251!8.26e-08!21 | |ontology_enrichment_celltype=CL:0002076!2.60e-08!43;CL:0000223!2.91e-08!59;CL:0002251!8.26e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002253;3.02e-11;2!CL:0002603;6.34e-08;3!CL:0002178;6.34e-08;3!CL:0000182;1.47e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.70e-11,2;CL:0002603,6.78e-08,3;CL:0002178,7.76e-08,3;CL:0000182,1.57e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.62e-08;11!UBERON:0006215;6.34e-08;3!UBERON:0009497;4.80e-07;13 | |||
|ontology_enrichment_disease=DOID:1749!2.59e-08!14;DOID:305!1.53e-07!106 | |ontology_enrichment_disease=DOID:1749!2.59e-08!14;DOID:305!1.53e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.45e-40;2!DOID:3119;2.16e-13;14!DOID:299;9.02e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.01e-40,2;DOID:3119,2.56e-13,14;DOID:299,9.24e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.86e-16!115;UBERON:0001049!1.51e-10!57;UBERON:0005068!1.51e-10!57;UBERON:0006241!1.51e-10!57;UBERON:0007135!1.51e-10!57;UBERON:0002616!5.67e-10!59;UBERON:0000033!4.51e-09!123;UBERON:0004119!6.17e-09!169;UBERON:0000925!6.17e-09!169;UBERON:0006595!6.17e-09!169;UBERON:0001007!8.40e-09!155;UBERON:0001555!8.40e-09!155;UBERON:0007026!8.40e-09!155;UBERON:0000153!8.95e-09!129;UBERON:0007811!8.95e-09!129;UBERON:0004733!2.64e-08!12;UBERON:0002028!2.64e-08!12;UBERON:0007277!2.64e-08!12;UBERON:0005911!3.71e-08!82;UBERON:0000955!3.73e-08!69;UBERON:0006238!3.73e-08!69;UBERON:0000344!4.93e-08!12;UBERON:0000481!6.39e-08!347;UBERON:0004732!1.56e-07!13;UBERON:0004921!4.03e-07!129;UBERON:0004185!4.03e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;8.13e-17;5!UBERON:0010039;8.13e-17;5!UBERON:0002037;3.47e-14;6!UBERON:0000007;3.02e-11;2!UBERON:0002680;8.83e-10;9!UBERON:0001895;8.83e-10;9!UBERON:0005409;2.13e-08;22!UBERON:0004733;1.47e-07;12!UBERON:0002028;1.47e-07;12!UBERON:0004732;4.80e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.04e-14,6;UBERON:0006215,3.04e-14,6;UBERON:0000007,3.02e-11,2;UBERON:0000945,7.67e-11,8;UBERON:0010039,7.67e-11,8;UBERON:0002680,8.09e-10,9;UBERON:0001895,8.09e-10,9;UBERON:0010092,8.09e-10,9;UBERON:0004733,1.37e-07,12;UBERON:0002028,1.37e-07,12;UBERON:0007277,1.37e-07,12;UBERON:0005409,1.87e-07,25;UBERON:0004732,4.52e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,1.10808952269109,0,0.626909442956176,0,0,0,0.229240217243854,0.410502947249729,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0.291604613383254,0,0,0,0,1.21637185924347,0.591095237907095,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,1.08194319871046,0,0.707660516026713,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0.195551382734803,0,0.213452994739353,0,0,1.14536596165916,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,1.02418136999391,0.988990300573997,1.14586024552114,0.0984274815147488,0.338693328263138,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0.157611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0,0,0.513260513652988,0,0.106787412567695,0.628817220398664,0.414239055347196,0,0,0.852548188666271,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0.573409195690071,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.294443155503077,0.235939446695481,0,0.346576998451015,0,0,0,0.150420656698515,0,0,0,0,0.443568258651136,0,0,0,0.126831620387814,0,0,0.496211178389294,0,0.127762427639595,0,0.336283722218824,0.606965604236632,1.13831095675649,0.177404740325278,0,0,0.135939465953663,0.197318320688547,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,1.07965256976767,1.46301509978723,0,0,0,0,0,0.596852325484105,0.118920090777569,2.37186772281816,0.109940516745429,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0.160482733378337,0,0,0,0,0.135982980381829,0,0,0,0,0,0.252332849670158,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p7@RNF43 | |short_description=p7@RNF43 | ||
}} | }} |
Latest revision as of 11:28, 16 September 2015
Short description: | p7@RNF43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RNF43_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_NM_017763, uc002iwg.3, uc002iwh.3, uc010dcw.2_5end |
EntrezGene: | RNF43 |
HGNC: | 18505 |
UniProt: | Q68DV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.70e-11 | 2 |
astrocyte of the cerebellum | 6.78e-08 | 3 |
epithelial cell of stomach | 7.76e-08 | 3 |
hepatocyte | 1.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.04e-14 | 6 |
rhombic lip | 3.04e-14 | 6 |
pituitary gland | 3.02e-11 | 2 |
stomach | 7.67e-11 | 8 |
food storage organ | 7.67e-11 | 8 |
regional part of metencephalon | 8.09e-10 | 9 |
metencephalon | 8.09e-10 | 9 |
future metencephalon | 8.09e-10 | 9 |
segmental subdivision of hindbrain | 1.37e-07 | 12 |
hindbrain | 1.37e-07 | 12 |
presumptive hindbrain | 1.37e-07 | 12 |
gastrointestinal system | 1.87e-07 | 25 |
segmental subdivision of nervous system | 4.52e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.01e-40 | 2 |
gastrointestinal system cancer | 2.56e-13 | 14 |
adenocarcinoma | 9.24e-08 | 25 |