FFCP PHASE1:Hg19::chr11:75279846..75279855,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:75279846..75279855,+
|short_description=p@chr11:75279846..75279855,+
|description=CAGE_peak_at_chr11:75279846..75279855,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:75279846..75279855,+ | |||
|description=CAGE_peak_at_chr11:75279846..75279855,+ | |||
|id=chr11:75279846..75279855,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.21e-25!180;CL:0000057!6.48e-20!75;CL:0000144!8.91e-13!625;CL:0000222!1.42e-11!119;CL:0000393!5.91e-11!60;CL:0000211!5.91e-11!60;CL:0000548!7.09e-11!679;CL:0000004!7.09e-11!679;CL:0000255!7.09e-11!679;CL:0000012!2.06e-10!682;CL:0002371!2.38e-10!591;CL:0000187!7.34e-10!54;CL:0000183!1.08e-09!59;CL:0002321!1.40e-09!248;CL:0000680!1.82e-09!57;CL:0000056!1.82e-09!57;CL:0000355!1.82e-09!57;CL:0000220!4.44e-09!246;CL:0000192!2.01e-07!42;CL:0000514!2.01e-07!42;CL:0002620!7.23e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.11e-08;55!CL:0000034;3.31e-08;69!CL:0000048;1.33e-07;58!CL:0002569;2.83e-07;6!CL:0000499;4.76e-07;28!CL:0000135;5.59e-07;3!CL:0000388;5.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.92e-12,76;CL:0000048,1.84e-10,427;CL:0000034,2.31e-10,441;CL:0000723,5.29e-10,433;CL:0000393,2.26e-08,61;CL:0000211,2.26e-08,61;CL:0000680,3.50e-08,58;CL:0000056,3.50e-08,58;CL:0000355,3.50e-08,58;CL:0000187,5.96e-08,55;CL:0002569,3.07e-07,6;CL:0000192,3.10e-07,43;CL:0000514,3.10e-07,43;CL:0000499,5.23e-07,28;CL:0000135,5.93e-07,3;CL:0000388,5.93e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.13e-11!83;UBERON:0002329!8.13e-11!83;UBERON:0003077!8.13e-11!83;UBERON:0003059!8.13e-11!83;UBERON:0007282!8.13e-11!83;UBERON:0009618!8.13e-11!83;UBERON:0007285!8.13e-11!83;UBERON:0004290!3.77e-09!70;UBERON:0001134!1.06e-08!61;UBERON:0002036!1.06e-08!61;UBERON:0003082!1.06e-08!61;UBERON:0005256!1.41e-08!143;UBERON:0000486!2.08e-08!82;UBERON:0004872!5.17e-08!84;UBERON:0002385!5.70e-08!63;UBERON:0001015!5.70e-08!63;UBERON:0000383!5.70e-08!63;UBERON:0002100!1.55e-07!216;UBERON:0002049!3.41e-07!79;UBERON:0007798!3.41e-07!79;UBERON:0001981!3.84e-07!60;UBERON:0007500!3.84e-07!60;UBERON:0004537!3.84e-07!60;UBERON:0006965!3.84e-07!60;UBERON:0000490!7.70e-07!138;UBERON:0003102!9.99e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;2.83e-07;6!UBERON:0007846;5.59e-07;3!UBERON:0000043;5.59e-07;3!UBERON:0007845;5.59e-07;3!UBERON:0001013;7.44e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.84e-08,78;UBERON:0001134,3.69e-08,62;UBERON:0002036,3.69e-08,62;UBERON:0003082,3.69e-08,62;UBERON:0005256,5.60e-08,122;UBERON:0002385,1.01e-07,64;UBERON:0001015,1.01e-07,64;UBERON:0000383,1.01e-07,64;UBERON:0002329,2.96e-07,71;UBERON:0003059,2.96e-07,71;UBERON:0007282,2.96e-07,71;UBERON:0004290,2.96e-07,71;UBERON:0009618,2.96e-07,71;UBERON:0003422,3.07e-07,6;UBERON:0003104,4.39e-07,160;UBERON:0009142,4.39e-07,160;UBERON:0003077,4.50e-07,72;UBERON:0007285,4.50e-07,72;UBERON:0007846,5.93e-07,3;UBERON:0000043,5.93e-07,3;UBERON:0007845,5.93e-07,3;UBERON:0001013,6.59e-07,14;UBERON:0007524,6.76e-07,73;UBERON:0001135,9.29e-07,15 | |||
|phase1_expression=0.54503513781167,3.21150785836475,0.563817616383885,3.00219895059391,2.23480547213644,3.48935409640147,2.53299878168311,0,0.783556884599516,0.245733936501509,6.28021051175185,0,0.527533956456907,0.123766352960047,0.994192127183747,8.0679017574213,5.42425075221579,7.30310090387373,2.43966399395253,0,1.42800483870977,0.940364164434263,0,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,1.15076305659177,0.361439152384566,0.50133791063589,1.15877215168659,0,1.45990461090791,0.189069634328136,0.665188192387692,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0.348259474598534,0,0,0,0,0,0,0.694281003215189,0,0.838998872419812,1.37559020970034,0.417989933073621,0.258416759169329,0,0,0,1.52054421143703,0.488124115096339,0,2.43042584364528,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0.366403487860815,0,0,0,0.496971951695318,1.39293562831038,0.264818361626438,7.74458876021797,2.12801029319014,8.97084160227691,3.20246987189115,2.71334303258876,0,0.538842688278752,1.14423332179421,0.605429710579726,1.72852777344,0.234321431833797,0.312160076830321,0,0.149448680551801,0.822041490506354,0.809364721840658,0.561803226808994,0.61246251376468,1.10550885580591,0.413303124703062,0,1.23633464639278,0,2.87447256726495,0.505008341862199,0.625592599359821,0,1.75591048352335,3.0648779579902,1.50238058906597,0.567160915800105,0.89694817844431,1.2813443329114,0.635795703478686,1.80054657650641,0.721367704669072,3.86460810068444,2.04728541964749,0.506328996723799,0.876933046450788,1.51460264546469,0.460249493211497,0.484938170456436,4.61512470271599,0.705264687593482,0.67824236924195,0,0,0,1.58565817968474,0.662648841607426,0.929551542956147,1.0366105501537,0.504641701751257,1.09493207722749,0,3.85944562915731,0,0.464367928031979,2.88751792667834,0.236613600079688,0.842923450390509,0.723033089650446,0.441175890929576,0.435758888184812,0.949082476444386,0.134831308160164,0.196221465125346,0,0.738155454624648,2.80483547606892,1.6462960453256,1.47008711385542,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0,0.587043471179108,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0.514137463516618,0.300343057843917,0,0.112131084345361,1.30788020649984,0.1466765716419,0.387815147273333,7.15312891703765,0,1.59562869950922,3.12022310734098,0.257207374262142,1.41849132023278,1.5985330740966,0.57191197463259,1.08524321078289,2.46972101034231,0.65147236858747,3.19852753868291,4.75171123760058,0.301439377059586,0,0.599837947092342,0,0,0,1.67737398844108,3.44585807502342,0,0,1.84928690295345,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,1.50051156317903,0.813795071099207,1.24782516918484,3.56857977594324,1.10391690523754,0.702848489956279,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.434418072340414,0.391602314925481,1.02943027143257,0,0,0,0,0,0,0.248107807818777,0.767309866440312,2.80660094433074,0.640695746278505,0.511707249066704,0.64341568457443,4.45254199334973,0.925258162815933,1.06537035187876,0,0.519254429183621,1.51073491997947,0.725156697549733,0.40101294060657,0.0920809889358963,1.37777337797528,3.09554985611419,1.83574180943194,0,0,0,0,0,2.27466768141793,0.340187410553031,1.51141141271498,0,0,0,0,0,0.447749509444357,0,0,0,0.656029291399411,0,0.103041011647722,0,0,0,0.650060246036521,0,0.386682873168488,0.770243085573222,1.5350367472613,0.964856007391714,0.537101224341368,1.30515024522806,0.852266274161009,0.178064071293475,0.330569830721956,0.384380134730212,0,0,1.39453664789186,1.88887408098384,0,0,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,1.33441135746677,0.255897791311334,1.71175595213568,1.27281299170375,0.78494864019923,0.359744915166629,5.21620356498504,2.47406044925942,0.404364963146632,0,0.842516912477962,1.46290121726877,0.243713489631284,3.16950440270266,0.818999468447914,1.1312434556297,0,0,0,0,0,1.9676842561399,0.202910376962704,1.54911749049875,1.97186921772569,0.430234056612155,0.88424136911809,0.35667105148125,0.709522128141196,0.633322905892992,0.329294892959902,0,2.79947776195986,0,1.34060455107157,2.17781969722645,0.282431402330337,0.43050537267123,3.36942951335251,0.443430153536676,0,0,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,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| ||
|short_description=p@chr11:75279846..75279855,+ | |||
}} | }} |
Latest revision as of 02:34, 24 July 2015
Short description: | p@chr11:75279846..75279855, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:75279846..75279855, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.92e-12 | 76 |
multi fate stem cell | 1.84e-10 | 427 |
stem cell | 2.31e-10 | 441 |
somatic stem cell | 5.29e-10 | 433 |
electrically responsive cell | 2.26e-08 | 61 |
electrically active cell | 2.26e-08 | 61 |
muscle precursor cell | 3.50e-08 | 58 |
myoblast | 3.50e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.50e-08 | 58 |
muscle cell | 5.96e-08 | 55 |
mesenchymal stem cell of umbilical cord | 3.07e-07 | 6 |
smooth muscle cell | 3.10e-07 | 43 |
smooth muscle myoblast | 3.10e-07 | 43 |
stromal cell | 5.23e-07 | 28 |
fibrocyte | 5.93e-07 | 3 |
tendon cell | 5.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.84e-08 | 78 |
skeletal muscle tissue | 3.69e-08 | 62 |
striated muscle tissue | 3.69e-08 | 62 |
myotome | 3.69e-08 | 62 |
trunk mesenchyme | 5.60e-08 | 122 |
muscle tissue | 1.01e-07 | 64 |
musculature | 1.01e-07 | 64 |
musculature of body | 1.01e-07 | 64 |
somite | 2.96e-07 | 71 |
presomitic mesoderm | 2.96e-07 | 71 |
presumptive segmental plate | 2.96e-07 | 71 |
dermomyotome | 2.96e-07 | 71 |
trunk paraxial mesoderm | 2.96e-07 | 71 |
mesenchyme of umbilical cord | 3.07e-07 | 6 |
mesenchyme | 4.39e-07 | 160 |
entire embryonic mesenchyme | 4.39e-07 | 160 |
paraxial mesoderm | 4.50e-07 | 72 |
presumptive paraxial mesoderm | 4.50e-07 | 72 |
dense regular connective tissue | 5.93e-07 | 3 |
tendon | 5.93e-07 | 3 |
regular connective tissue | 5.93e-07 | 3 |
adipose tissue | 6.59e-07 | 14 |
dense mesenchyme tissue | 6.76e-07 | 73 |
smooth muscle tissue | 9.29e-07 | 15 |