FFCP PHASE1:Hg19::chr17:50236665..50236674,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56934 | |EntrezGene=56934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1369 | |HGNC=1369 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS85 | |UniProt=Q9NS85 | ||
|association_with_transcript=486bp_to_ENST00000285273,NM_001082533,uc002itx.3_5end | |association_with_transcript=486bp_to_ENST00000285273,NM_001082533,uc002itx.3_5end | ||
|cluster_id=chr17:50236665..50236674,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_23_at_CA10_5end | |description=CAGE_peak_23_at_CA10_5end | ||
|id=chr17:50236665..50236674,- | |id=chr17:50236665..50236674,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.75e-79!57;UBERON:0005068!3.75e-79!57;UBERON:0006241!3.75e-79!57;UBERON:0007135!3.75e-79!57;UBERON:0002616!2.30e-76!59;UBERON:0000955!5.83e-69!69;UBERON:0006238!5.83e-69!69;UBERON:0001017!4.09e-62!82;UBERON:0002780!2.30e-59!41;UBERON:0001890!2.30e-59!41;UBERON:0006240!2.30e-59!41;UBERON:0005743!4.42e-59!86;UBERON:0003080!6.78e-58!42;UBERON:0003075!1.83e-55!86;UBERON:0007284!1.83e-55!86;UBERON:0000073!3.61e-53!94;UBERON:0001016!3.61e-53!94;UBERON:0002346!8.02e-53!90;UBERON:0001893!1.04e-51!34;UBERON:0002020!1.58e-51!34;UBERON:0003528!1.58e-51!34;UBERON:0001869!9.30e-49!32;UBERON:0007023!1.37e-47!115;UBERON:0002791!5.49e-47!33;UBERON:0000033!3.09e-40!123;UBERON:0002619!5.67e-40!22;UBERON:0003056!5.61e-39!61;UBERON:0000153!3.55e-38!129;UBERON:0007811!3.55e-38!129;UBERON:0001950!9.33e-37!20;UBERON:0000956!4.15e-35!25;UBERON:0000203!4.15e-35!25;UBERON:0004121!6.46e-28!169;UBERON:0000924!3.58e-27!173;UBERON:0006601!3.58e-27!173;UBERON:0004733!8.35e-27!12;UBERON:0002028!8.35e-27!12;UBERON:0007277!8.35e-27!12;UBERON:0004732!1.10e-24!13;UBERON:0000349!4.21e-22!5;UBERON:0003076!2.73e-21!15;UBERON:0003057!2.73e-21!15;UBERON:0001871!6.43e-21!7;UBERON:0002298!1.36e-20!8;UBERON:0000988!1.60e-20!3;UBERON:0000025!2.95e-20!194;UBERON:0002680!7.75e-19!9;UBERON:0001895!7.75e-19!9;UBERON:0010092!7.75e-19!9;UBERON:0002420!2.61e-18!9;UBERON:0007245!2.61e-18!9;UBERON:0010009!2.61e-18!9;UBERON:0010011!2.61e-18!9;UBERON:0000454!2.61e-18!9;UBERON:0000200!4.34e-18!6;UBERON:0002308!7.22e-18!9;UBERON:0000125!7.22e-18!9;UBERON:0004111!2.22e-15!241;UBERON:0001876!1.12e-14!2;UBERON:0002148!7.36e-14!2;UBERON:0009662!7.36e-14!2;UBERON:0000477!1.85e-13!286;UBERON:0001872!6.28e-13!5;UBERON:0000483!4.46e-12!309;UBERON:0000119!6.51e-12!312;UBERON:0000064!9.20e-12!219;UBERON:0000475!1.93e-10!365;UBERON:0001896!8.21e-10!3;UBERON:0005290!8.21e-10!3;UBERON:0010096!8.21e-10!3;UBERON:0002771!1.03e-09!3;UBERON:0006331!1.52e-09!3;UBERON:0001894!5.68e-09!7;UBERON:0006222!5.68e-09!7;UBERON:0009663!6.01e-09!7;UBERON:0003112!2.71e-08!1;UBERON:0000032!2.71e-08!1;UBERON:0005253!2.71e-08!1;UBERON:0003128!2.71e-08!1;UBERON:0002241!2.71e-08!1;UBERON:0001703!2.71e-08!1;UBERON:0004761!2.71e-08!1;UBERON:0009617!2.71e-08!1;UBERON:0007190!3.11e-08!1;UBERON:0002581!3.83e-08!1;UBERON:0001882!5.40e-08!1;UBERON:0005403!5.40e-08!1;UBERON:0002022!5.79e-08!1;UBERON:0002902!6.63e-08!1;UBERON:0009899!6.63e-08!1;UBERON:0002336!1.06e-07!1;UBERON:0001018!1.06e-07!1;UBERON:0002473!1.06e-07!1;UBERON:0005340!1.06e-07!1;UBERON:0002316!1.06e-07!1;UBERON:0003544!1.06e-07!1;UBERON:0001020!1.06e-07!1;UBERON:0005970!1.06e-07!1;UBERON:0002437!1.06e-07!1;UBERON:0000369!1.64e-07!4;UBERON:0002435!1.64e-07!4;UBERON:0000204!1.64e-07!4;UBERON:0010082!1.64e-07!4;UBERON:0000481!2.36e-07!347 | |ontology_enrichment_uberon=UBERON:0001049!3.75e-79!57;UBERON:0005068!3.75e-79!57;UBERON:0006241!3.75e-79!57;UBERON:0007135!3.75e-79!57;UBERON:0002616!2.30e-76!59;UBERON:0000955!5.83e-69!69;UBERON:0006238!5.83e-69!69;UBERON:0001017!4.09e-62!82;UBERON:0002780!2.30e-59!41;UBERON:0001890!2.30e-59!41;UBERON:0006240!2.30e-59!41;UBERON:0005743!4.42e-59!86;UBERON:0003080!6.78e-58!42;UBERON:0003075!1.83e-55!86;UBERON:0007284!1.83e-55!86;UBERON:0000073!3.61e-53!94;UBERON:0001016!3.61e-53!94;UBERON:0002346!8.02e-53!90;UBERON:0001893!1.04e-51!34;UBERON:0002020!1.58e-51!34;UBERON:0003528!1.58e-51!34;UBERON:0001869!9.30e-49!32;UBERON:0007023!1.37e-47!115;UBERON:0002791!5.49e-47!33;UBERON:0000033!3.09e-40!123;UBERON:0002619!5.67e-40!22;UBERON:0003056!5.61e-39!61;UBERON:0000153!3.55e-38!129;UBERON:0007811!3.55e-38!129;UBERON:0001950!9.33e-37!20;UBERON:0000956!4.15e-35!25;UBERON:0000203!4.15e-35!25;UBERON:0004121!6.46e-28!169;UBERON:0000924!3.58e-27!173;UBERON:0006601!3.58e-27!173;UBERON:0004733!8.35e-27!12;UBERON:0002028!8.35e-27!12;UBERON:0007277!8.35e-27!12;UBERON:0004732!1.10e-24!13;UBERON:0000349!4.21e-22!5;UBERON:0003076!2.73e-21!15;UBERON:0003057!2.73e-21!15;UBERON:0001871!6.43e-21!7;UBERON:0002298!1.36e-20!8;UBERON:0000988!1.60e-20!3;UBERON:0000025!2.95e-20!194;UBERON:0002680!7.75e-19!9;UBERON:0001895!7.75e-19!9;UBERON:0010092!7.75e-19!9;UBERON:0002420!2.61e-18!9;UBERON:0007245!2.61e-18!9;UBERON:0010009!2.61e-18!9;UBERON:0010011!2.61e-18!9;UBERON:0000454!2.61e-18!9;UBERON:0000200!4.34e-18!6;UBERON:0002308!7.22e-18!9;UBERON:0000125!7.22e-18!9;UBERON:0004111!2.22e-15!241;UBERON:0001876!1.12e-14!2;UBERON:0002148!7.36e-14!2;UBERON:0009662!7.36e-14!2;UBERON:0000477!1.85e-13!286;UBERON:0001872!6.28e-13!5;UBERON:0000483!4.46e-12!309;UBERON:0000119!6.51e-12!312;UBERON:0000064!9.20e-12!219;UBERON:0000475!1.93e-10!365;UBERON:0001896!8.21e-10!3;UBERON:0005290!8.21e-10!3;UBERON:0010096!8.21e-10!3;UBERON:0002771!1.03e-09!3;UBERON:0006331!1.52e-09!3;UBERON:0001894!5.68e-09!7;UBERON:0006222!5.68e-09!7;UBERON:0009663!6.01e-09!7;UBERON:0003112!2.71e-08!1;UBERON:0000032!2.71e-08!1;UBERON:0005253!2.71e-08!1;UBERON:0003128!2.71e-08!1;UBERON:0002241!2.71e-08!1;UBERON:0001703!2.71e-08!1;UBERON:0004761!2.71e-08!1;UBERON:0009617!2.71e-08!1;UBERON:0007190!3.11e-08!1;UBERON:0002581!3.83e-08!1;UBERON:0001882!5.40e-08!1;UBERON:0005403!5.40e-08!1;UBERON:0002022!5.79e-08!1;UBERON:0002902!6.63e-08!1;UBERON:0009899!6.63e-08!1;UBERON:0002336!1.06e-07!1;UBERON:0001018!1.06e-07!1;UBERON:0002473!1.06e-07!1;UBERON:0005340!1.06e-07!1;UBERON:0002316!1.06e-07!1;UBERON:0003544!1.06e-07!1;UBERON:0001020!1.06e-07!1;UBERON:0005970!1.06e-07!1;UBERON:0002437!1.06e-07!1;UBERON:0000369!1.64e-07!4;UBERON:0002435!1.64e-07!4;UBERON:0000204!1.64e-07!4;UBERON:0010082!1.64e-07!4;UBERON:0000481!2.36e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;3.43e-07;53!UBERON:0002616;3.43e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p23@CA10 | |short_description=p23@CA10 | ||
}} | }} |
Latest revision as of 05:49, 16 September 2015
Short description: | p23@CA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_CA10_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 486bp_to_ENST00000285273, NM_001082533, uc002itx.3_5end |
EntrezGene: | CA10 |
HGNC: | 1369 |
UniProt: | Q9NS85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |