FFCP PHASE1:Hg19::chr17:4843320..4843329,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26001 | |EntrezGene=26001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24544 | |HGNC=24544 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_uc002fzq.2,uc002fzr.2_5end | |association_with_transcript=17bp_to_uc002fzq.2,uc002fzr.2_5end | ||
|cluster_id=chr17:4843320..4843329,+ | |||
|description=CAGE_peak_20_at_RNF167_5end | |description=CAGE_peak_20_at_RNF167_5end | ||
|id=chr17:4843320..4843329,+ | |id=chr17:4843320..4843329,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;5.97e-34;1!CL:0000047;9.86e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.61e-34,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease=DOID:305!1.60e-12!106;DOID:0050687!3.97e-12!143;DOID:162!2.43e-08!235;DOID:14566!9.84e-08!239 | |ontology_enrichment_disease=DOID:305!1.60e-12!106;DOID:0050687!3.97e-12!143;DOID:162!2.43e-08!235;DOID:14566!9.84e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0.609868530647977,0.530119073285941,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.110293972732394,0,0.237270619111097,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0.063497894292169,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.192444225451024,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0,0,0.191505370132367,0.423347165447766,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0.422250816255987,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0.21787692703798,0,0.0769502585037971,0.227884111694002,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0.210998064528027,0.326465616318295,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0.450970258243478,0.622129148383483,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0.174118413160805,0,0.171986032471617,0.580537987734511,0.219267951258557,0,0.193978032976839,0,0,0,0,0.0633107959558787,0.391102765469606,0,0.213452994739353,0,0,0,0.514784993585894,0,0,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0.429226048136571,0.669514372325618,0.201550417460179,0,0,0,0.164831716762333,0.13480708770837,0.196854963029498,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0.335434687599266,0.0788057072991982,0.104909176269996,0,0.537862017998534,0.575745591958336,0,0,0,0,0,0,0,0,0.340776043570843,0,0.293104467356165,1.32506888912221,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0.468334905806882,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0.138258436151731,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.255788742607303,0.539124056983409,0,0.218419276384028,0.169732529954025,0.212574920101683,0,0,0,0,1.60114149657094,0,0,0,0,0,0.205116364240755,0,0.207471757392654,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0.126831620387814,0,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.263091094251396,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.4582137370881,0,0.955538938977433,0.111855431797792,0.196300467230486,0,0,0.307988420568741,0,0,0.233939463462106,0.198950775161368,0,0.33883824611688,0.329821550236287,0,0.154348316215889,0,0,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0,0.401206833445841,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0.252332849670158,0.327796715891087,0,0.305966489225945,0,0.0918948995348449,0,3.18270532516606,2.14371304124943,0,0,0.213233981900981,0,0.258355639344024,0.124149428591716,0.112131862580613,0,0,0,0.342233301085281,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0.609868530647977,0.530119073285941,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.110293972732394,0,0.237270619111097,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0.063497894292169,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.192444225451024,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0,0,0.191505370132367,0.423347165447766,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0.422250816255987,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0.21787692703798,0,0.0769502585037971,0.227884111694002,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0.210998064528027,0.326465616318295,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0.450970258243478,0.622129148383483,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0.174118413160805,0,0.171986032471617,0.580537987734511,0.219267951258557,0,0.193978032976839,0,0,0,0,0.0633107959558787,0.391102765469606,0,0.213452994739353,0,0,0,0.514784993585894,0,0,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0.429226048136571,0.669514372325618,0.201550417460179,0,0,0,0.164831716762333,0.13480708770837,0.196854963029498,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0.335434687599266,0.0788057072991982,0.104909176269996,0,0.537862017998534,0.575745591958336,0,0,0,0,0,0,0,0,0.340776043570843,0,0.293104467356165,1.32506888912221,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0.468334905806882,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0.138258436151731,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.255788742607303,0.539124056983409,0,0.218419276384028,0.169732529954025,0.212574920101683,0,0,0,0,1.60114149657094,0,0,0,0,0,0.205116364240755,0,0.207471757392654,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0.126831620387814,0,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.263091094251396,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.4582137370881,0,0.955538938977433,0.111855431797792,0.196300467230486,0,0,0.307988420568741,0,0,0.233939463462106,0.198950775161368,0,0.33883824611688,0.329821550236287,0,0.154348316215889,0,0,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0,0.401206833445841,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0.252332849670158,0.327796715891087,0,0.305966489225945,0,0.0918948995348449,0,3.18270532516606,2.14371304124943,0,0,0.213233981900981,0,0.258355639344024,0.124149428591716,0.112131862580613,0,0,0,0.342233301085281,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | ||
|short_description=p20@RNF167 | |short_description=p20@RNF167 | ||
}} | }} |
Latest revision as of 01:45, 16 September 2015
Short description: | p20@RNF167 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_RNF167_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_uc002fzq.2, uc002fzr.2_5end |
EntrezGene: | RNF167 |
HGNC: | 24544 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.61e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |