FFCP PHASE1:Hg19::chr17:48271701..48271751,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48271701..48271751,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48271701..48271751,+ | |description=CAGE_peak_at_chr17:48271701..48271751,+ | ||
|id=chr17:48271701..48271751,+ | |id=chr17:48271701..48271751,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.45e-34!180;CL:0000057!1.38e-26!75;CL:0000048!1.26e-14!430;CL:0000723!4.78e-14!436;CL:0000034!7.43e-14!444;CL:0000183!9.77e-12!59;CL:0000144!2.85e-11!625;CL:0000680!1.39e-10!57;CL:0000056!1.39e-10!57;CL:0000355!1.39e-10!57;CL:0000187!2.61e-10!54;CL:0002371!5.37e-10!591;CL:0002334!7.17e-10!12;CL:0002620!1.92e-09!23;CL:0002320!3.65e-09!365;CL:0000393!1.20e-08!60;CL:0000211!1.20e-08!60;CL:0000134!1.77e-07!358;CL:0000192!2.46e-07!42;CL:0000514!2.46e-07!42;CL:0000499!4.68e-07!27;CL:0002494!8.91e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.45e-34!180;CL:0000057!1.38e-26!75;CL:0000048!1.26e-14!430;CL:0000723!4.78e-14!436;CL:0000034!7.43e-14!444;CL:0000183!9.77e-12!59;CL:0000144!2.85e-11!625;CL:0000680!1.39e-10!57;CL:0000056!1.39e-10!57;CL:0000355!1.39e-10!57;CL:0000187!2.61e-10!54;CL:0002371!5.37e-10!591;CL:0002334!7.17e-10!12;CL:0002620!1.92e-09!23;CL:0002320!3.65e-09!365;CL:0000393!1.20e-08!60;CL:0000211!1.20e-08!60;CL:0000134!1.77e-07!358;CL:0000192!2.46e-07!42;CL:0000514!2.46e-07!42;CL:0000499!4.68e-07!27;CL:0002494!8.91e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.05e-10;12!CL:0000134;1.94e-09;55!CL:0002569;1.12e-08;6!CL:0000057;6.20e-08;73!CL:0000048;6.86e-08;58!CL:0002570;7.83e-08;8!CL:0002320;1.61e-07;188!CL:0000499;2.21e-07;28!CL:0000349;5.14e-07;19!CL:0000723;6.14e-07;61!CL:0002620;8.21e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.85e-21,76;CL:0000048,1.33e-15,427;CL:0000723,6.17e-15,433;CL:0000034,4.42e-14,441;CL:0002320,7.24e-12,361;CL:0002334,1.58e-10,12;CL:0000134,3.30e-10,354;CL:0002569,8.75e-09,6;CL:0000219,1.57e-08,386;CL:0002570,6.03e-08,8;CL:0000499,1.47e-07,28;CL:0000349,5.44e-07,19;CL:0002620,6.82e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.15e-11!83;UBERON:0002329!1.15e-11!83;UBERON:0003077!1.15e-11!83;UBERON:0003059!1.15e-11!83;UBERON:0007282!1.15e-11!83;UBERON:0009618!1.15e-11!83;UBERON:0007285!1.15e-11!83;UBERON:0001134!5.70e-11!61;UBERON:0002036!5.70e-11!61;UBERON:0003082!5.70e-11!61;UBERON:0004290!9.52e-11!70;UBERON:0002385!3.29e-10!63;UBERON:0001015!3.29e-10!63;UBERON:0000383!3.29e-10!63;UBERON:0002384!3.78e-09!375;UBERON:0000486!5.29e-09!82;UBERON:0005256!5.29e-07!143;UBERON:0003688!8.74e-07!6;UBERON:0002358!8.74e-07!6;UBERON:0003684!8.74e-07!6;UBERON:0001178!8.74e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;4.70e-10;7!UBERON:0009142;4.70e-10;7!UBERON:0004457;1.03e-09;9!UBERON:0000042;1.03e-09;9!UBERON:0003688;2.51e-09;6!UBERON:0002358;2.51e-09;6!UBERON:0003684;2.51e-09;6!UBERON:0001178;2.51e-09;6!UBERON:0002384;5.07e-09;198!UBERON:0003422;1.12e-08;6!UBERON:0001013;7.92e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.38e-12,371;UBERON:0003688,2.29e-09,6;UBERON:0002358,2.29e-09,6;UBERON:0003684,2.29e-09,6;UBERON:0001178,2.29e-09,6;UBERON:0003422,8.75e-09,6;UBERON:0001134,2.06e-07,62;UBERON:0002036,2.06e-07,62;UBERON:0003082,2.06e-07,62;UBERON:0002385,5.66e-07,64;UBERON:0001015,5.66e-07,64;UBERON:0000383,5.66e-07,64;UBERON:0001013,6.46e-07,14;UBERON:0004457,7.01e-07,12;UBERON:0000042,7.01e-07,12 | |||
|phase1_expression=6.35874327446948,3.42560838225573,5.3562673556469,10.007329835313,11.1740273606822,10.4680622892044,0,0.631719873426831,0,0,0,0,3.16520373874144,0.866364470720326,1.32558950291166,1.34465029290355,0,0,0,0.61560529038394,3.06001036866379,3.76145665773705,0,0.273748850145768,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.2786256184353,5.06014813338393,2.50668955317945,3.91085601194224,0,5.35298357332899,0.283604451492204,1.33037638477538,1.22968699970376,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,9.44246708221105,1.77282716330412,0.794455084879313,12.333974692199,3.19201543978521,2.24271040056923,3.20246987189115,7.64669400093196,0.311211035399766,0.67355336034844,0.817309515567294,1.21085942115945,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0.352303495931295,0.485618833104395,0.140450806702248,0.61246251376468,0.122834317311768,0.619954687054593,4.75201142912821,10.1379441004208,0,5.03032699271367,0.336672227908132,0,0,1.31693286264251,6.12975591598039,4.6573798261045,0.794025282120147,5.74046834204358,5.55249210928275,2.33125091275518,9.90300617078528,0.618315175430633,6.1833729610951,1.67505170698431,4.89451363499672,1.55899208257918,4.29137416214995,2.39329736469978,2.42469085228218,4.61512470271599,0.806016785821122,1.52604533079439,0,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,3.7041661019826,8.82052268313252,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0.821860859650752,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.51336800074665,2.58543431515556,7.15312891703765,5.917119267892,3.19125739901845,7.28052058379563,0.771622122786426,0,1.5985330740966,3.57444984145369,10.3098105024374,3.29296134712308,1.62868092146868,4.97548728239564,3.95975936466715,0.904318131178758,0,0.199945982364114,0,0,0,7.66799537573064,10.3375742250703,0,0.723906533337896,1.02738161275192,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.736148950314839,2.50085260529839,1.08506009479894,6.03115498439341,5.17444067511769,5.04647728108591,0.937131319941706,1.80567659836631,4.5481500811197,3.10419213877515,2.65690239414175,2.58116835958384,0.521301686808497,2.15381273209015,6.51972505240626,0,0,0,0.303127571446259,6.65741758041988,3.0239029332968,6.69891081110698,4.45039722535381,10.3844234940237,6.53509661204075,2.55853624533352,13.511729376063,7.42090332224955,0.925258162815933,4.97172830876756,0.574890092096664,2.07701771673448,1.74315567689939,0,0,0,1.49258782613989,2.73136752010076,2.75361271414791,0,0,0,0,0,0,0,0,0,0.541892875087706,2.50844886927427,0,0,0,0,0,0,0,0,0.103041011647722,0.457847324091717,0.495056999523528,0,0,3.21367859688319,0.773365746336976,0.770243085573222,1.07452572308291,1.10269257987624,0.429680979473094,3.48040065394148,0.511359764496605,4.89676196057055,0.165284915360978,0,0,0,1.39453664789186,11.0184321390724,0,1.23213432070436,0,0,0.18532421910392,0.286249773483982,2.232950216158,0.316379424718726,5.3376454298671,1.02359116524534,0.42793898803392,0.636406495851874,0.78494864019923,1.07923474549989,2.47083326762449,1.88499843753098,0,1.58510321173008,1.26377536871694,0,1.46228093778771,3.16950440270266,2.04749867111979,4.10075752665767,4.52032466480971,1.65409603063837,0,0,0,0.655894752046633,0.405820753925408,0,0.845086807596724,0.286822704408103,3.242218353433,0,0.354761064070598,2.74439925886963,3.62224382255892,1.51789269506286,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66559381492711,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.692552326534174,0.227884111694002,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,4.81546588379273,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,4.29363407483012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0.268733889946905,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0.105600336519406,0,0,0,0,0.25426853765475,0.542999601753713,0,0.979762080328227,2.39460383124975,0,2.04465626142506,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53733164907686,4.67426619694449,0,0.757612021100357,1.50940741051545,0.889811221596536,0.457680136793847,3.32708032279126,3.57505561340395,0.887130899937803,0.318593534327405,1.34940933649081,1.08684069813382,1.65882483136342,3.98762571836992,3.65221543268214,6.46107718688039,0.38080521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| ||
|short_description=p@chr17:48271701..48271751,+ | |short_description=p@chr17:48271701..48271751,+ | ||
}} | }} |
Latest revision as of 18:36, 25 July 2015
Short description: | p@chr17:48271701..48271751, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48271701..48271751, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.85e-21 | 76 |
multi fate stem cell | 1.33e-15 | 427 |
somatic stem cell | 6.17e-15 | 433 |
stem cell | 4.42e-14 | 441 |
connective tissue cell | 7.24e-12 | 361 |
preadipocyte | 1.58e-10 | 12 |
mesenchymal cell | 3.30e-10 | 354 |
mesenchymal stem cell of umbilical cord | 8.75e-09 | 6 |
motile cell | 1.57e-08 | 386 |
mesenchymal stem cell of adipose | 6.03e-08 | 8 |
stromal cell | 1.47e-07 | 28 |
extraembryonic cell | 5.44e-07 | 19 |
skin fibroblast | 6.82e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.38e-12 | 371 |
omentum | 2.29e-09 | 6 |
peritoneum | 2.29e-09 | 6 |
abdominal cavity | 2.29e-09 | 6 |
visceral peritoneum | 2.29e-09 | 6 |
mesenchyme of umbilical cord | 8.75e-09 | 6 |
skeletal muscle tissue | 2.06e-07 | 62 |
striated muscle tissue | 2.06e-07 | 62 |
myotome | 2.06e-07 | 62 |
muscle tissue | 5.66e-07 | 64 |
musculature | 5.66e-07 | 64 |
musculature of body | 5.66e-07 | 64 |
adipose tissue | 6.46e-07 | 14 |
cavity lining | 7.01e-07 | 12 |
serous membrane | 7.01e-07 | 12 |