FFCP PHASE1:Hg19::chr17:48262718..48262726,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_AB032018_5end | |association_with_transcript=40bp_to_AB032018_5end | ||
|cluster_id=chr17:48262718..48262726,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_4_at_AB032018_5end | |description=CAGE_peak_4_at_AB032018_5end | ||
|id=chr17:48262718..48262726,+ | |id=chr17:48262718..48262726,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.93e-29!180;CL:0000057!1.41e-18!75;CL:0000680!9.69e-12!57;CL:0000056!9.69e-12!57;CL:0000355!9.69e-12!57;CL:0000183!1.29e-11!59;CL:0000187!1.59e-11!54;CL:0000048!1.65e-10!430;CL:0000393!1.96e-10!60;CL:0000211!1.96e-10!60;CL:0000723!8.57e-10!436;CL:0000034!3.77e-09!444;CL:0002334!1.94e-08!12;CL:0000192!2.44e-08!42;CL:0000514!2.44e-08!42;CL:0002371!2.25e-07!591;CL:0000144!4.65e-07!625 | |ontology_enrichment_celltype=CL:0000055!2.93e-29!180;CL:0000057!1.41e-18!75;CL:0000680!9.69e-12!57;CL:0000056!9.69e-12!57;CL:0000355!9.69e-12!57;CL:0000183!1.29e-11!59;CL:0000187!1.59e-11!54;CL:0000048!1.65e-10!430;CL:0000393!1.96e-10!60;CL:0000211!1.96e-10!60;CL:0000723!8.57e-10!436;CL:0000034!3.77e-09!444;CL:0002334!1.94e-08!12;CL:0000192!2.44e-08!42;CL:0000514!2.44e-08!42;CL:0002371!2.25e-07!591;CL:0000144!4.65e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000499;9.29e-11;28!CL:0002334;8.37e-10;12!CL:0000327;7.87e-07;15!CL:0000135;8.81e-07;3!CL:0000388;8.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-13,76;CL:0000499,8.91e-11,28;CL:0002334,6.36e-10,12;CL:0000048,1.02e-08,427;CL:0000723,2.70e-08,433;CL:0000034,9.37e-08,441;CL:0000327,6.72e-07,15;CL:0002569,6.84e-07,6;CL:0000135,8.85e-07,3;CL:0000388,8.85e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.68e-14!83;UBERON:0002329!4.68e-14!83;UBERON:0003077!4.68e-14!83;UBERON:0003059!4.68e-14!83;UBERON:0007282!4.68e-14!83;UBERON:0009618!4.68e-14!83;UBERON:0007285!4.68e-14!83;UBERON:0002385!9.71e-13!63;UBERON:0001015!9.71e-13!63;UBERON:0000383!9.71e-13!63;UBERON:0001134!3.31e-12!61;UBERON:0002036!3.31e-12!61;UBERON:0003082!3.31e-12!61;UBERON:0004290!8.83e-12!70;UBERON:0005256!2.44e-10!143;UBERON:0000486!2.16e-09!82;UBERON:0002100!5.47e-08!216;UBERON:0000475!7.46e-07!365 | |ontology_enrichment_uberon=UBERON:0000914!4.68e-14!83;UBERON:0002329!4.68e-14!83;UBERON:0003077!4.68e-14!83;UBERON:0003059!4.68e-14!83;UBERON:0007282!4.68e-14!83;UBERON:0009618!4.68e-14!83;UBERON:0007285!4.68e-14!83;UBERON:0002385!9.71e-13!63;UBERON:0001015!9.71e-13!63;UBERON:0000383!9.71e-13!63;UBERON:0001134!3.31e-12!61;UBERON:0002036!3.31e-12!61;UBERON:0003082!3.31e-12!61;UBERON:0004290!8.83e-12!70;UBERON:0005256!2.44e-10!143;UBERON:0000486!2.16e-09!82;UBERON:0002100!5.47e-08!216;UBERON:0000475!7.46e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0003104;3.33e-08;7!UBERON:0009142;3.33e-08;7!UBERON:0007846;8.81e-07;3!UBERON:0000043;8.81e-07;3!UBERON:0007845;8.81e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,6.84e-07,6;UBERON:0007846,8.85e-07,3;UBERON:0000043,8.85e-07,3;UBERON:0007845,8.85e-07,3 | |||
|phase1_expression=2.72517568905835,4.06790995392868,3.38290569830331,3.00219895059391,0.893922188854576,0,2.53299878168311,1.26343974685366,0,0,0,0.655324116390517,1.31883489114227,0.618831764800233,0.331397375727916,2.01697543935533,1.20538905604795,1.46062018077475,0.975865597581014,0.123121058076788,0,2.5076377718247,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.9408389224012,1.44575660953827,1.50401373190767,5.35932120155048,0,2.43317435151318,0.189069634328136,1.77383517970051,0.790513071238134,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9212707440783,1.13967460498122,0.397227542439656,0.286836620748814,1.41867352879343,2.24271040056923,1.06748995729705,12.333377420858,0,0.134710672069688,0,0.151357427644931,2.88087962239999,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0,0,0.61246251376468,0.737005903870608,0.206651562351531,3.56400857184616,7.41800787835671,0,2.15585442544872,0.841680569770331,0.250237039743928,0,0.877955241761676,6.43624371177941,1.20190447125277,2.04177929688038,0.179389635688862,3.20336083227851,2.54318281391474,0.300091096084402,0,2.06112432036503,1.30281799432113,1.85653965465393,0.194874010322397,0.757301322732344,2.02509777013059,0,0.355009592516614,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,5.14592750554308,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,2.94017422771084,0,0,1.18157981336281,0,0,1.02940686179115,0,0,0,0,0,0,0,0.115930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0,0,1.0267360014933,1.93907573636667,0,11.834238535784,0.797814349754612,2.08014873822732,0.771622122786426,0,0.532844358032199,6.71996570193294,10.8524321078289,0.823240336780769,4.23457039581856,6.04166312862328,3.95975936466715,0.602878754119172,0,0.599837947092342,0,0,0,3.83399768786532,2.29723871668228,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,1.00034104211935,0,30.3637457834978,38.5406615801869,20.9744211995133,4.4513737697231,0.300946099727719,0,2.0694614258501,3.32112799267718,0.921845842708516,1.04260337361699,0.195801157462741,0,0,0,0,0.606255142892519,6.65741758041988,2.41912234663744,2.97729369382532,4.29693525206575,8.70046292742528,4.48487022394953,0.511707249066704,19.3024705372329,0,2.62156479464514,3.9063579568888,1.39616165223476,2.07701771673448,0.697262270759755,0,0,0,2.52591785962135,4.37018803216121,1.31124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0.457847324091717,0.577566499444116,0,0.650060246036521,4.82051789532479,0.96670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.644521469209642,1.30515024522806,0.426133137080504,11.3070685271356,0,0,0.127612712494584,0,0.464845549297286,2.51849877464512,0,0.308033580176089,0,0.869932992075073,0.55597265731176,0.143124886741991,0.744316738719335,0,2.85945290885737,2.04718233049067,0,0.318203247925937,0,1.43897966066652,3.29444435683266,2.12062324222236,0.808729926293264,0,0,0,1.46228093778771,0,0.409499734223957,7.21167702963935,0,0,1.32687795048244,0,0.578775534266688,1.31178950409327,0.202910376962704,0.30982349809975,0,1.00387946542836,3.14396931241988,0.7133421029625,0,5.06658324714394,0.329294892959902,0.75894634753143,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,1.86623752597084,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,1.07730361905316,0,0,0,0,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4335094148843,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0,0,0,6.55344148263544,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0.604651252380536,6.84569778730567,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0.314727528809989,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,2.10341978862502,0.554805861502613,0,0,0.889811221596536,0,0.756154618816195,1.70980920641059,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,1.65882483136342,1.59505028734797,2.08698024724694,2.70463696194993,3.42724690951916,0,0.727394636810238,0.644463342254931,0.928067519756987,0.796191777397232,0.800055529326307,5.15093557774189,2.69399591012735,0,0,0,0,0.453411851024545,0.463044948647668,0.489473409012935,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,6.34816698643231,2.1437183414724,0,0,0,0,0,0,0,0,0,0,0,0,7.62764190934334,0,1.5913297769302,0.225630985047772,2.0170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,0,0,3.20684545892101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6392577253528,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,3.71551252856727,0,0.490296643507811,0,0,0,1.6906229103336,5.77752189938577,0,0.0644578879735772,0,0,0,0,2.19100916473955,0,0,0,0,0,2.1161073620616,36.0835167621749,15.2517957448368,25.5249671653036,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,6.18967521805725,0,0.0620747142958579,0.112131862580613,0,2.42540626749863,0,4.10679961302337,0,0.143444410785353,7.31852784401229,0,0,0,0,16.4248659682418,0,5.69654649642034,0,0,0 | |phase1_expression=2.72517568905835,4.06790995392868,3.38290569830331,3.00219895059391,0.893922188854576,0,2.53299878168311,1.26343974685366,0,0,0,0.655324116390517,1.31883489114227,0.618831764800233,0.331397375727916,2.01697543935533,1.20538905604795,1.46062018077475,0.975865597581014,0.123121058076788,0,2.5076377718247,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.9408389224012,1.44575660953827,1.50401373190767,5.35932120155048,0,2.43317435151318,0.189069634328136,1.77383517970051,0.790513071238134,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9212707440783,1.13967460498122,0.397227542439656,0.286836620748814,1.41867352879343,2.24271040056923,1.06748995729705,12.333377420858,0,0.134710672069688,0,0.151357427644931,2.88087962239999,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0,0,0.61246251376468,0.737005903870608,0.206651562351531,3.56400857184616,7.41800787835671,0,2.15585442544872,0.841680569770331,0.250237039743928,0,0.877955241761676,6.43624371177941,1.20190447125277,2.04177929688038,0.179389635688862,3.20336083227851,2.54318281391474,0.300091096084402,0,2.06112432036503,1.30281799432113,1.85653965465393,0.194874010322397,0.757301322732344,2.02509777013059,0,0.355009592516614,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,5.14592750554308,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,2.94017422771084,0,0,1.18157981336281,0,0,1.02940686179115,0,0,0,0,0,0,0,0.115930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0,0,1.0267360014933,1.93907573636667,0,11.834238535784,0.797814349754612,2.08014873822732,0.771622122786426,0,0.532844358032199,6.71996570193294,10.8524321078289,0.823240336780769,4.23457039581856,6.04166312862328,3.95975936466715,0.602878754119172,0,0.599837947092342,0,0,0,3.83399768786532,2.29723871668228,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,1.00034104211935,0,30.3637457834978,38.5406615801869,20.9744211995133,4.4513737697231,0.300946099727719,0,2.0694614258501,3.32112799267718,0.921845842708516,1.04260337361699,0.195801157462741,0,0,0,0,0.606255142892519,6.65741758041988,2.41912234663744,2.97729369382532,4.29693525206575,8.70046292742528,4.48487022394953,0.511707249066704,19.3024705372329,0,2.62156479464514,3.9063579568888,1.39616165223476,2.07701771673448,0.697262270759755,0,0,0,2.52591785962135,4.37018803216121,1.31124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0.457847324091717,0.577566499444116,0,0.650060246036521,4.82051789532479,0.96670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.644521469209642,1.30515024522806,0.426133137080504,11.3070685271356,0,0,0.127612712494584,0,0.464845549297286,2.51849877464512,0,0.308033580176089,0,0.869932992075073,0.55597265731176,0.143124886741991,0.744316738719335,0,2.85945290885737,2.04718233049067,0,0.318203247925937,0,1.43897966066652,3.29444435683266,2.12062324222236,0.808729926293264,0,0,0,1.46228093778771,0,0.409499734223957,7.21167702963935,0,0,1.32687795048244,0,0.578775534266688,1.31178950409327,0.202910376962704,0.30982349809975,0,1.00387946542836,3.14396931241988,0.7133421029625,0,5.06658324714394,0.329294892959902,0.75894634753143,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,1.86623752597084,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,1.07730361905316,0,0,0,0,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4335094148843,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0,0,0,6.55344148263544,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0.604651252380536,6.84569778730567,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0.314727528809989,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,2.10341978862502,0.554805861502613,0,0,0.889811221596536,0,0.756154618816195,1.70980920641059,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,1.65882483136342,1.59505028734797,2.08698024724694,2.70463696194993,3.42724690951916,0,0.727394636810238,0.644463342254931,0.928067519756987,0.796191777397232,0.800055529326307,5.15093557774189,2.69399591012735,0,0,0,0,0.453411851024545,0.463044948647668,0.489473409012935,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,6.34816698643231,2.1437183414724,0,0,0,0,0,0,0,0,0,0,0,0,7.62764190934334,0,1.5913297769302,0.225630985047772,2.0170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,0,0,3.20684545892101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6392577253528,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,3.71551252856727,0,0.490296643507811,0,0,0,1.6906229103336,5.77752189938577,0,0.0644578879735772,0,0,0,0,2.19100916473955,0,0,0,0,0,2.1161073620616,36.0835167621749,15.2517957448368,25.5249671653036,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,6.18967521805725,0,0.0620747142958579,0.112131862580613,0,2.42540626749863,0,4.10679961302337,0,0.143444410785353,7.31852784401229,0,0,0,0,16.4248659682418,0,5.69654649642034,0,0,0 | ||
|short_description=p4@AB032018 | |short_description=p4@AB032018 | ||
}} | }} |
Latest revision as of 18:30, 25 July 2015
Short description: | p4@AB032018 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AB032018_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 40bp_to_AB032018_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-13 | 76 |
stromal cell | 8.91e-11 | 28 |
preadipocyte | 6.36e-10 | 12 |
multi fate stem cell | 1.02e-08 | 427 |
somatic stem cell | 2.70e-08 | 433 |
stem cell | 9.37e-08 | 441 |
extracellular matrix secreting cell | 6.72e-07 | 15 |
mesenchymal stem cell of umbilical cord | 6.84e-07 | 6 |
fibrocyte | 8.85e-07 | 3 |
tendon cell | 8.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 6.84e-07 | 6 |
dense regular connective tissue | 8.85e-07 | 3 |
tendon | 8.85e-07 | 3 |
regular connective tissue | 8.85e-07 | 3 |