FFCP PHASE1:Hg19::chr17:48167005..48167029,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48167005..48167029,+ | |||
|description=CAGE_peak_at_chr17:48167005..48167029,+ | |description=CAGE_peak_at_chr17:48167005..48167029,+ | ||
|id=chr17:48167005..48167029,+ | |id=chr17:48167005..48167029,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.48e-19!254;CL:0002076!3.34e-12!43;CL:0000220!1.58e-09!246;CL:0000223!1.79e-09!59;CL:0002321!2.94e-09!248;CL:0002368!2.89e-07!13;CL:0000077!3.56e-07!19 | |ontology_enrichment_celltype=CL:0000066!1.48e-19!254;CL:0002076!3.34e-12!43;CL:0000220!1.58e-09!246;CL:0000223!1.79e-09!59;CL:0002321!2.94e-09!248;CL:0002368!2.89e-07!13;CL:0000077!3.56e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.65e-17;13!CL:0002076;1.17e-11;42!CL:0002231;3.42e-10;3!CL:0000307;7.61e-10;3!CL:0002174;9.07e-08;1!CL:0000501;9.07e-08;1!CL:0000306;1.49e-07;4!CL:0002222;1.49e-07;4!CL:0002224;1.49e-07;4!CL:0002202;4.09e-07;9!CL:0002632;4.09e-07;9!CL:0000362;5.77e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.34e-17,13;CL:0002076,5.35e-17,42;CL:0000223,9.40e-12,58;CL:0000066,2.70e-11,253;CL:0002231,3.36e-10,3;CL:0000068,7.15e-10,3;CL:0000069,7.15e-10,3;CL:0000307,7.15e-10,3;CL:0000377,7.15e-10,3;CL:0002174,1.18e-07,1;CL:0000501,1.18e-07,1;CL:0000306,1.31e-07,4;CL:0002222,1.31e-07,4;CL:0002224,1.31e-07,4;CL:0002321,3.91e-07,250;CL:0002202,4.90e-07,9;CL:0002632,4.90e-07,9;CL:0000362,6.97e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;7.61e-10;3!CL:0000223;1.42e-08;58 | |||
|ontology_enrichment_disease=DOID:193!6.12e-08!29;DOID:120!1.13e-07!27 | |ontology_enrichment_disease=DOID:193!6.12e-08!29;DOID:120!1.13e-07!27 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0010371;2.96e-09;31!UBERON:0007195;9.07e-08;1!UBERON:0010077;1.49e-07;4!UBERON:0005389;1.49e-07;4!UBERON:0000484;1.49e-07;4!UBERON:0000965;1.49e-07;4!UBERON:0001803;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.31e-07,4;UBERON:0005389,1.31e-07,4;UBERON:0000484,1.31e-07,4;UBERON:0002546,1.31e-07,4;UBERON:0000965,1.31e-07,4;UBERON:0001803,1.31e-07,4;UBERON:0003073,1.31e-07,4;UBERON:0005426,1.31e-07,4;UBERON:0007195,1.64e-07,1 | |||
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| ||
|short_description=p@chr17:48167005..48167029,+ | |short_description=p@chr17:48167005..48167029,+ | ||
}} | }} |
Latest revision as of 18:27, 25 July 2015
Short description: | p@chr17:48167005..48167029, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48167005..48167029, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.34e-17 | 13 |
endo-epithelial cell | 5.35e-17 | 42 |
endodermal cell | 9.40e-12 | 58 |
epithelial cell | 2.70e-11 | 253 |
epithelial cell of prostate | 3.36e-10 | 3 |
duct epithelial cell | 7.15e-10 | 3 |
branched duct epithelial cell | 7.15e-10 | 3 |
tracheal epithelial cell | 7.15e-10 | 3 |
tracheoblast | 7.15e-10 | 3 |
follicular cell of ovary | 1.18e-07 | 1 |
granulosa cell | 1.18e-07 | 1 |
crystallin accumulating cell | 1.31e-07 | 4 |
vertebrate lens cell | 1.31e-07 | 4 |
lens epithelial cell | 1.31e-07 | 4 |
embryonic cell | 3.91e-07 | 250 |
epithelial cell of tracheobronchial tree | 4.90e-07 | 9 |
epithelial cell of lower respiratory tract | 4.90e-07 | 9 |
epidermal cell | 6.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.31e-07 | 4 |
transparent eye structure | 1.31e-07 | 4 |
simple cuboidal epithelium | 1.31e-07 | 4 |
cranial placode | 1.31e-07 | 4 |
lens of camera-type eye | 1.31e-07 | 4 |
epithelium of lens | 1.31e-07 | 4 |
lens placode | 1.31e-07 | 4 |
lens vesicle | 1.31e-07 | 4 |
stroma of bone marrow | 1.64e-07 | 1 |