FFCP PHASE1:Hg19::chr22:37976082..37976102,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3957 | |EntrezGene=3957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6562 | |HGNC=6562 | ||
|TSSclassifier=strong | |||
|UniProt=P05162 | |UniProt=P05162 | ||
|association_with_transcript=0bp_to_ENST00000215886_5end | |association_with_transcript=0bp_to_ENST00000215886_5end | ||
|cluster_id=chr22:37976082..37976102,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_LGALS2_5end | |description=CAGE_peak_1_at_LGALS2_5end | ||
|id=chr22:37976082..37976102,- | |id=chr22:37976082..37976102,- | ||
|ontology_enrichment_celltype=CL:0002057!6.66e-50!42;CL:0000738!1.89e-47!140;CL:0000860!2.34e-45!45;CL:0002009!3.46e-43!65;CL:0000557!3.51e-42!71;CL:0000766!6.96e-42!76;CL:0002194!2.45e-41!63;CL:0000576!2.45e-41!63;CL:0000040!2.45e-41!63;CL:0000559!2.45e-41!63;CL:0002087!1.30e-40!119;CL:0002031!1.19e-39!124;CL:0000839!1.75e-39!70;CL:0000037!1.08e-37!172;CL:0000566!1.08e-37!172;CL:0002032!1.20e-34!165;CL:0000837!1.20e-34!165;CL:0000988!7.58e-34!182;CL:0000763!5.93e-32!112;CL:0000049!5.93e-32!112;CL:0002393!8.48e-11!9;CL:0002397!8.48e-11!9;CL:0000451!7.21e-08!10;CL:0000134!2.96e-07!358 | |ontology_enrichment_celltype=CL:0002057!6.66e-50!42;CL:0000738!1.89e-47!140;CL:0000860!2.34e-45!45;CL:0002009!3.46e-43!65;CL:0000557!3.51e-42!71;CL:0000766!6.96e-42!76;CL:0002194!2.45e-41!63;CL:0000576!2.45e-41!63;CL:0000040!2.45e-41!63;CL:0000559!2.45e-41!63;CL:0002087!1.30e-40!119;CL:0002031!1.19e-39!124;CL:0000839!1.75e-39!70;CL:0000037!1.08e-37!172;CL:0000566!1.08e-37!172;CL:0002032!1.20e-34!165;CL:0000837!1.20e-34!165;CL:0000988!7.58e-34!182;CL:0000763!5.93e-32!112;CL:0000049!5.93e-32!112;CL:0002393!8.48e-11!9;CL:0002397!8.48e-11!9;CL:0000451!7.21e-08!10;CL:0000134!2.96e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.06e-62;33!CL:0002057;2.06e-62;33!CL:0000473;2.29e-51;39!CL:0000234;2.29e-51;39!CL:0000576;4.23e-45;48!CL:0000766;1.78e-30;69!CL:0002087;1.56e-17;104!CL:0000738;2.92e-13;136!CL:0002393;4.09e-13;6!CL:0002397;4.09e-13;6!CL:0000763;6.28e-13;100!CL:0000988;8.32e-09;177!CL:0000767;1.91e-07;3!CL:0000226;7.52e-07;3!CL:0000842;7.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.66e-85,42;CL:0002057,1.66e-85,42;CL:0000473,2.58e-84,48;CL:0000234,2.58e-84,48;CL:0002009,1.39e-73,61;CL:0002194,2.36e-70,59;CL:0000576,2.36e-70,59;CL:0000040,2.36e-70,59;CL:0000559,2.36e-70,59;CL:0000766,3.35e-66,72;CL:0000557,1.02e-65,67;CL:0000839,1.98e-61,66;CL:0000738,8.18e-59,136;CL:0002087,4.00e-57,115;CL:0002031,9.91e-52,120;CL:0000037,5.69e-44,168;CL:0000763,1.27e-42,108;CL:0000049,1.27e-42,108;CL:0000988,9.15e-41,177;CL:0002032,3.20e-40,161;CL:0000837,3.20e-40,161;CL:0002393,1.62e-17,9;CL:0002397,1.62e-17,9;CL:0000134,2.20e-12,354;CL:0002320,8.46e-12,361;CL:0000219,9.25e-10,386;CL:0000767,1.91e-07,3;CL:0000048,2.48e-07,427;CL:0000034,4.90e-07,441;CL:0000723,5.27e-07,433;CL:0000226,7.75e-07,3;CL:0000842,7.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.45e-61;42!CL:0000049;1.52e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.08e-47!102;UBERON:0003061!1.08e-47!102;UBERON:0002193!4.72e-44!112;UBERON:0002371!4.78e-35!80;UBERON:0001474!8.92e-35!86;UBERON:0002405!1.12e-29!115;UBERON:0004765!1.94e-26!101;UBERON:0001434!1.94e-26!101;UBERON:0003081!4.62e-14!216;UBERON:0002204!3.29e-11!167;UBERON:0007023!5.73e-11!115;UBERON:0000178!2.05e-10!15;UBERON:0000179!2.05e-10!15;UBERON:0000463!2.05e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.49e-18;15!UBERON:0000179;7.49e-18;15!UBERON:0000463;7.49e-18;15!UBERON:0002390;1.98e-11;32!UBERON:0002193;6.52e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.48e-77,98;UBERON:0003061,2.48e-77,98;UBERON:0002193,2.83e-73,108;UBERON:0002371,3.13e-56,76;UBERON:0002405,7.49e-56,93;UBERON:0001474,3.32e-53,82;UBERON:0004765,3.65e-47,90;UBERON:0001434,5.69e-41,100;UBERON:0003081,3.49e-30,203;UBERON:0002204,1.06e-19,167;UBERON:0000178,7.56e-18,15;UBERON:0000179,7.56e-18,15;UBERON:0000463,7.56e-18,15;UBERON:0000926,9.33e-14,315;UBERON:0004120,9.33e-14,315;UBERON:0006603,9.33e-14,315;UBERON:0002384,5.26e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,127.056661422196,34.1608164306519,26.9380054569972,0,0,0,0,0,0,45.427623499614,33.0898338325734,24.3052175201754,0,0.971680998056939,0.257575567634187,43.0378786787512,52.1468802290557,32.0210960767917,51.3668171561563,58.7970079871211,42.7394791835243,59.5523252106851,68.1387479367408,50.8436794260458,53.4355805141759,46.4748972180355,37.9194162464157,48.9430082810772,55.1270423116848,44.4952499201268,56.625520088617,63.2230183339904,46.67161018333,54.7553158309949,59.041242656003,32.8193057910174,56.8810107712025,49.9298997728203,26.7813567068097,54.77220902597,66.7498135577858,52.9940781080485,42.3779651843358,60.7658099379482,42.0894975296376,35.9133986730301,49.5368018918551,83.8634582033504,82.2245579992344,127.500182022439,67.8261975861678,2.85012743741249,3.9783335439818,3.47061892152804,0,1.09227722252426,0.889509253863555,7.25441378363062,0.800791974072025,0.574752439954483,3.30522436392431,0.954053754535364,0,1.17447437874188,0,0,20.7388168303168,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86708872891687,0,0.950452044448374,14.4552114314662,7.03926361349301,1.24930726552346,10.6549763419808,2.46338399076314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.327447688744282,0,0,0.649094787309367,1.0447784237956,0,6.67773748054957,9.15191857248205,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8044521047592,11.1473371716546,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,10.5416969741516,0,0,0,0,0,0,0,2.56139988262505,0.646882724578552,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5076019592166,30.1999881146064,24.2271556213819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,25.8798280708406,30.585488285695,23.9251818613148,25.7290317494412,39.9021404893608,38.908398671563,49.6828922259066,25.3800056414167,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0.684704037099577,0,0,0,0.642352300414798,0,0,0,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0.293016358543788,0,1.67165076416218,0,0,0,0,0,0,0,0,0,0.796991953004279,5.8019622261541,0,0.102268682502155,0.369254416383208,0,0,0,0,0.0986434056369336,33.5276329285716,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.530745387020035,3.05515072466813,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,4.83962864194656,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,10.348799011369,1.5476039091159,0,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0.747511887973863,1.57204305099666,4.55662960881915,7.93865634899121,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.601030435988874,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.398594520940089,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39241355481392,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,2.74128883428591,0.496211178389294,0,0,0,0,0,0,0.532214220975833,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.617393264863557,9.61662066217412,0,0,0,0,0,0,0,4.22927630909341,3.48072595057317,0.499705779624645,0,0,0,0.730336388246517,1.83491713361816,0,0,0.0679914901909147,0.436350690340377,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,1.27940389140589,0.23806443146374,5.68382406556854,4.03485642923076,0,0.0636471582781649,0.606351566874658,0.870866991587845,0,6.26374093035664,0.358611026963382,0,0,0,0,0.0898252021065869,0,0.611207220914332,0.406896178315738,0,7.44713036286797,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,127.056661422196,34.1608164306519,26.9380054569972,0,0,0,0,0,0,45.427623499614,33.0898338325734,24.3052175201754,0,0.971680998056939,0.257575567634187,43.0378786787512,52.1468802290557,32.0210960767917,51.3668171561563,58.7970079871211,42.7394791835243,59.5523252106851,68.1387479367408,50.8436794260458,53.4355805141759,46.4748972180355,37.9194162464157,48.9430082810772,55.1270423116848,44.4952499201268,56.625520088617,63.2230183339904,46.67161018333,54.7553158309949,59.041242656003,32.8193057910174,56.8810107712025,49.9298997728203,26.7813567068097,54.77220902597,66.7498135577858,52.9940781080485,42.3779651843358,60.7658099379482,42.0894975296376,35.9133986730301,49.5368018918551,83.8634582033504,82.2245579992344,127.500182022439,67.8261975861678,2.85012743741249,3.9783335439818,3.47061892152804,0,1.09227722252426,0.889509253863555,7.25441378363062,0.800791974072025,0.574752439954483,3.30522436392431,0.954053754535364,0,1.17447437874188,0,0,20.7388168303168,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86708872891687,0,0.950452044448374,14.4552114314662,7.03926361349301,1.24930726552346,10.6549763419808,2.46338399076314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.327447688744282,0,0,0.649094787309367,1.0447784237956,0,6.67773748054957,9.15191857248205,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8044521047592,11.1473371716546,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,10.5416969741516,0,0,0,0,0,0,0,2.56139988262505,0.646882724578552,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5076019592166,30.1999881146064,24.2271556213819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,25.8798280708406,30.585488285695,23.9251818613148,25.7290317494412,39.9021404893608,38.908398671563,49.6828922259066,25.3800056414167,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0.684704037099577,0,0,0,0.642352300414798,0,0,0,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0.293016358543788,0,1.67165076416218,0,0,0,0,0,0,0,0,0,0.796991953004279,5.8019622261541,0,0.102268682502155,0.369254416383208,0,0,0,0,0.0986434056369336,33.5276329285716,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.530745387020035,3.05515072466813,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,4.83962864194656,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,10.348799011369,1.5476039091159,0,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0.747511887973863,1.57204305099666,4.55662960881915,7.93865634899121,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.601030435988874,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.398594520940089,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39241355481392,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,2.74128883428591,0.496211178389294,0,0,0,0,0,0,0.532214220975833,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.617393264863557,9.61662066217412,0,0,0,0,0,0,0,4.22927630909341,3.48072595057317,0.499705779624645,0,0,0,0.730336388246517,1.83491713361816,0,0,0.0679914901909147,0.436350690340377,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,1.27940389140589,0.23806443146374,5.68382406556854,4.03485642923076,0,0.0636471582781649,0.606351566874658,0.870866991587845,0,6.26374093035664,0.358611026963382,0,0,0,0,0.0898252021065869,0,0.611207220914332,0.406896178315738,0,7.44713036286797,0.320568492303233 | ||
|short_description=p1@LGALS2 | |short_description=p1@LGALS2 | ||
}} | }} |
Latest revision as of 05:31, 20 September 2015
Short description: | p1@LGALS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGALS2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000215886_5end |
EntrezGene: | LGALS2 |
HGNC: | 6562 |
UniProt: | P05162 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.48e-77 | 98 |
blood island | 2.48e-77 | 98 |
hemolymphoid system | 2.83e-73 | 108 |
bone marrow | 3.13e-56 | 76 |
immune system | 7.49e-56 | 93 |
bone element | 3.32e-53 | 82 |
skeletal element | 3.65e-47 | 90 |
skeletal system | 5.69e-41 | 100 |
lateral plate mesoderm | 3.49e-30 | 203 |
musculoskeletal system | 1.06e-19 | 167 |
blood | 7.56e-18 | 15 |
haemolymphatic fluid | 7.56e-18 | 15 |
organism substance | 7.56e-18 | 15 |
mesoderm | 9.33e-14 | 315 |
mesoderm-derived structure | 9.33e-14 | 315 |
presumptive mesoderm | 9.33e-14 | 315 |
connective tissue | 5.26e-11 | 371 |