FFCP PHASE1:Hg19::chr17:46670939..46670958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=85bp_to_AB464575_5end | |association_with_transcript=85bp_to_AB464575_5end | ||
|cluster_id=chr17:46670939..46670958,- | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_5_at_AB464575_5end | |description=CAGE_peak_5_at_AB464575_5end | ||
|id=chr17:46670939..46670958,- | |id=chr17:46670939..46670958,- | ||
|ontology_enrichment_celltype=CL:0002334!1.38e-07!12;CL:1000507!2.57e-07!12;CL:1000494!2.57e-07!12 | |ontology_enrichment_celltype=CL:0002334!1.38e-07!12;CL:1000507!2.57e-07!12;CL:1000494!2.57e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002598;5.15e-12;2!CL:0002262;1.58e-11;2!CL:1000398;1.58e-11;2!CL:0002554;2.96e-11;2!CL:0002575;2.96e-11;2!CL:0002553;5.57e-07;1!CL:0000167;6.95e-07;1!CL:0000164;6.95e-07;1!CL:0000502;6.95e-07;1!CL:0000172;6.95e-07;1!CL:0000173;6.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,4.89e-12,2;CL:0002262,1.67e-11,2;CL:1000398,1.67e-11,2;CL:0002554,2.28e-11,2;CL:0002575,4.72e-11,2;CL:0002553,5.58e-07,1;CL:0000167,6.96e-07,1;CL:0000164,6.96e-07,1;CL:0000502,6.96e-07,1;CL:0000172,6.96e-07,1;CL:0000173,6.96e-07,1;CL:0002351,6.96e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.21e-16;3!UBERON:0003057;7.21e-16;3!CL:0002351;6.95e-07;1!UBERON:0005754;9.92e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;6.95e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,6.96e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005177!2.54e-09!107;UBERON:0002100!5.38e-09!216;UBERON:0000489!7.02e-09!32;UBERON:0009569!8.00e-09!113;UBERON:0000080!1.94e-08!18;UBERON:0002120!1.94e-08!18;UBERON:0004875!1.94e-08!18;UBERON:0005721!1.94e-08!18;UBERON:0005754!1.94e-08!18;UBERON:0007297!1.94e-08!18;UBERON:0000353!7.33e-08!17;UBERON:0004876!2.46e-07!20;UBERON:0009773!2.57e-07!12;UBERON:0001231!2.57e-07!12;UBERON:0004810!2.57e-07!12;UBERON:0006555!2.99e-07!17;UBERON:0005103!2.99e-07!17;UBERON:0000083!2.99e-07!17;UBERON:0009201!2.99e-07!17;UBERON:0004819!2.99e-07!17;UBERON:0006553!2.99e-07!17;UBERON:0003074!2.99e-07!17;UBERON:0003060!2.99e-07!17;UBERON:0003076!3.06e-07!15;UBERON:0003057!3.06e-07!15;UBERON:0005178!3.17e-07!34;UBERON:0002224!3.17e-07!34;UBERON:0005181!6.53e-07!35;UBERON:0003887!7.26e-07!21;UBERON:0002113!8.25e-07!27;UBERON:0003918!8.25e-07!27;UBERON:0005095!8.25e-07!27;UBERON:0007687!8.25e-07!27;UBERON:0000464!9.25e-07!104 | |ontology_enrichment_uberon=UBERON:0005177!2.54e-09!107;UBERON:0002100!5.38e-09!216;UBERON:0000489!7.02e-09!32;UBERON:0009569!8.00e-09!113;UBERON:0000080!1.94e-08!18;UBERON:0002120!1.94e-08!18;UBERON:0004875!1.94e-08!18;UBERON:0005721!1.94e-08!18;UBERON:0005754!1.94e-08!18;UBERON:0007297!1.94e-08!18;UBERON:0000353!7.33e-08!17;UBERON:0004876!2.46e-07!20;UBERON:0009773!2.57e-07!12;UBERON:0001231!2.57e-07!12;UBERON:0004810!2.57e-07!12;UBERON:0006555!2.99e-07!17;UBERON:0005103!2.99e-07!17;UBERON:0000083!2.99e-07!17;UBERON:0009201!2.99e-07!17;UBERON:0004819!2.99e-07!17;UBERON:0006553!2.99e-07!17;UBERON:0003074!2.99e-07!17;UBERON:0003060!2.99e-07!17;UBERON:0003076!3.06e-07!15;UBERON:0003057!3.06e-07!15;UBERON:0005178!3.17e-07!34;UBERON:0002224!3.17e-07!34;UBERON:0005181!6.53e-07!35;UBERON:0003887!7.26e-07!21;UBERON:0002113!8.25e-07!27;UBERON:0003918!8.25e-07!27;UBERON:0005095!8.25e-07!27;UBERON:0007687!8.25e-07!27;UBERON:0000464!9.25e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;7.21e-16;3!UBERON:0005174;7.21e-16;3!UBERON:0001137;7.21e-16;3!UBERON:0001281;1.58e-11;2!UBERON:0003497;1.58e-11;2!UBERON:0003909;1.58e-11;2!UBERON:0003835;1.58e-11;2!UBERON:0001280;5.79e-08;3!UBERON:0004647;5.79e-08;3!UBERON:0006947;7.25e-08;3!UBERON:0004054;7.25e-08;3!UBERON:0000998;9.92e-07;1!UBERON:0006868;9.92e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,6.53e-16,3;UBERON:0005174,6.53e-16,3;UBERON:0001137,6.53e-16,3;UBERON:0001281,1.67e-11,2;UBERON:0003497,1.67e-11,2;UBERON:0003909,1.67e-11,2;UBERON:0003835,1.67e-11,2;UBERON:0006947,5.22e-08,3;UBERON:0004054,5.22e-08,3;UBERON:0001280,6.00e-08,3;UBERON:0004647,6.00e-08,3;UBERON:0005171,6.00e-08,3;UBERON:0005178,7.07e-07,34;UBERON:0002224,7.07e-07,34;UBERON:0000998,9.67e-07,1;UBERON:0006868,9.67e-07,1 | |||
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|short_description=p5@AB464575 | |short_description=p5@AB464575 | ||
}} | }} |
Latest revision as of 18:09, 25 July 2015
Short description: | p5@AB464575 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AB464575_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 85bp_to_AB464575_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 4.89e-12 | 2 |
endothelial cell of sinusoid | 1.67e-11 | 2 |
endothelial cell of hepatic sinusoid | 1.67e-11 | 2 |
fibroblast of lymphatic vessel | 2.28e-11 | 2 |
central nervous system pericyte | 4.72e-11 | 2 |
lung fibroblast | 5.58e-07 | 1 |
peptide hormone secreting cell | 6.96e-07 | 1 |
enteroendocrine cell | 6.96e-07 | 1 |
type D enteroendocrine cell | 6.96e-07 | 1 |
somatostatin secreting cell | 6.96e-07 | 1 |
pancreatic D cell | 6.96e-07 | 1 |
progenitor cell of endocrine pancreas | 6.96e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 6.53e-16 | 3 |
dorsal region element | 6.53e-16 | 3 |
dorsum | 6.53e-16 | 3 |
hepatic sinusoid | 1.67e-11 | 2 |
abdomen blood vessel | 1.67e-11 | 2 |
sinusoid | 1.67e-11 | 2 |
abdominal segment blood vessel | 1.67e-11 | 2 |
male genital duct | 5.22e-08 | 3 |
internal male genitalia | 5.22e-08 | 3 |
liver parenchyma | 6.00e-08 | 3 |
liver lobule | 6.00e-08 | 3 |
hepatic duct | 6.00e-08 | 3 |
thoracic cavity element | 7.07e-07 | 34 |
thoracic cavity | 7.07e-07 | 34 |
seminal vesicle | 9.67e-07 | 1 |
seminal fluid secreting gland | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.96e-07 | 1 |