FFCP PHASE1:Hg19::chr22:36424508..36424528,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23543 | |EntrezGene=23543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9906 | |HGNC=9906 | ||
|TSSclassifier=strong | |||
|UniProt=O43251 | |UniProt=O43251 | ||
|association_with_transcript=-35bp_to_ENST00000438146_5end | |association_with_transcript=-35bp_to_ENST00000438146_5end | ||
|cluster_id=chr22:36424508..36424528,- | |||
|description=CAGE_peak_6_at_RBFOX2_5end | |description=CAGE_peak_6_at_RBFOX2_5end | ||
|id=chr22:36424508..36424528,- | |id=chr22:36424508..36424528,- | ||
|ontology_enrichment_celltype=CL:0000055!1.03e-11!180 | |ontology_enrichment_celltype=CL:0000055!1.03e-11!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.09e-18!365;UBERON:0000468!2.97e-14!659;UBERON:0000924!9.58e-13!173;UBERON:0006601!9.58e-13!173;UBERON:0004111!1.06e-12!241;UBERON:0000481!1.13e-12!347;UBERON:0000073!2.84e-12!94;UBERON:0001016!2.84e-12!94;UBERON:0004121!3.38e-12!169;UBERON:0001017!1.18e-11!82;UBERON:0000477!1.24e-11!286;UBERON:0005743!1.49e-11!86;UBERON:0000033!9.45e-11!123;UBERON:0000119!4.07e-10!312;UBERON:0000955!5.15e-10!69;UBERON:0006238!5.15e-10!69;UBERON:0000483!5.19e-10!309;UBERON:0000153!5.97e-10!129;UBERON:0007811!5.97e-10!129;UBERON:0000467!8.67e-10!625;UBERON:0000480!1.12e-09!626;UBERON:0002616!1.86e-09!59;UBERON:0001049!2.20e-09!57;UBERON:0005068!2.20e-09!57;UBERON:0006241!2.20e-09!57;UBERON:0007135!2.20e-09!57;UBERON:0002346!2.47e-09!90;UBERON:0000922!3.54e-09!612;UBERON:0003075!8.07e-09!86;UBERON:0007284!8.07e-09!86;UBERON:0000025!1.62e-08!194;UBERON:0007023!3.65e-08!115;UBERON:0002050!1.39e-07!605;UBERON:0005423!1.39e-07!605;UBERON:0002619!2.57e-07!22;UBERON:0000923!2.70e-07!604;UBERON:0005291!2.70e-07!604;UBERON:0006598!2.70e-07!604;UBERON:0002532!2.70e-07!604;UBERON:0000956!3.67e-07!25;UBERON:0000203!3.67e-07!25;UBERON:0003080!4.84e-07!42;UBERON:0001869!6.01e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.78e-09;22!UBERON:0000956;8.48e-09;25!UBERON:0000203;8.48e-09;25!UBERON:0001950;5.75e-08;20!UBERON:0001869;7.76e-08;32!UBERON:0001893;1.28e-07;34!UBERON:0002791;4.07e-07;32!UBERON:0003528;8.82e-07;34!UBERON:0002020;8.82e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.31e-12,89;UBERON:0001017,2.64e-12,81;UBERON:0000955,2.29e-10,68;UBERON:0006238,2.29e-10,68;UBERON:0001049,3.12e-10,56;UBERON:0005068,3.12e-10,56;UBERON:0006241,3.12e-10,56;UBERON:0007135,3.12e-10,56;UBERON:0000073,4.13e-10,53;UBERON:0002616,4.13e-10,53;UBERON:0002619,1.02e-09,22;UBERON:0001869,1.42e-09,32;UBERON:0000956,2.59e-09,25;UBERON:0000203,2.59e-09,25;UBERON:0002780,2.84e-09,41;UBERON:0001890,2.84e-09,41;UBERON:0003080,2.84e-09,41;UBERON:0006240,2.84e-09,41;UBERON:0001893,3.64e-09,34;UBERON:0004121,4.54e-09,171;UBERON:0000924,4.54e-09,171;UBERON:0006601,4.54e-09,171;UBERON:0007023,6.66e-09,114;UBERON:0004111,1.11e-08,240;UBERON:0001950,1.85e-08,20;UBERON:0002791,1.98e-08,32;UBERON:0003528,5.20e-08,34;UBERON:0002020,5.20e-08,34;UBERON:0002346,6.50e-07,86;UBERON:0011216,9.49e-07,223 | |||
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| ||
|short_description=p6@RBFOX2 | |short_description=p6@RBFOX2 | ||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p6@RBFOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RBFOX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000438146_5end |
EntrezGene: | RBFOX2 |
HGNC: | 9906 |
UniProt: | O43251 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.31e-12 | 89 |
central nervous system | 2.64e-12 | 81 |
brain | 2.29e-10 | 68 |
future brain | 2.29e-10 | 68 |
neural tube | 3.12e-10 | 56 |
neural rod | 3.12e-10 | 56 |
future spinal cord | 3.12e-10 | 56 |
neural keel | 3.12e-10 | 56 |
regional part of nervous system | 4.13e-10 | 53 |
regional part of brain | 4.13e-10 | 53 |
regional part of cerebral cortex | 1.02e-09 | 22 |
cerebral hemisphere | 1.42e-09 | 32 |
cerebral cortex | 2.59e-09 | 25 |
pallium | 2.59e-09 | 25 |
regional part of forebrain | 2.84e-09 | 41 |
forebrain | 2.84e-09 | 41 |
anterior neural tube | 2.84e-09 | 41 |
future forebrain | 2.84e-09 | 41 |
telencephalon | 3.64e-09 | 34 |
ectoderm-derived structure | 4.54e-09 | 171 |
ectoderm | 4.54e-09 | 171 |
presumptive ectoderm | 4.54e-09 | 171 |
adult organism | 6.66e-09 | 114 |
anatomical conduit | 1.11e-08 | 240 |
neocortex | 1.85e-08 | 20 |
regional part of telencephalon | 1.98e-08 | 32 |
brain grey matter | 5.20e-08 | 34 |
gray matter | 5.20e-08 | 34 |
neurectoderm | 6.50e-07 | 86 |
organ system subdivision | 9.49e-07 | 223 |