FFCP PHASE1:Hg19::chr17:4639693..4639704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58191 | |EntrezGene=58191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16642 | |HGNC=16642 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_uc002fyq.3_5end | |association_with_transcript=-18bp_to_uc002fyq.3_5end | ||
|cluster_id=chr17:4639693..4639704,- | |||
|description=CAGE_peak_14_at_CXCL16_5end | |description=CAGE_peak_14_at_CXCL16_5end | ||
|id=chr17:4639693..4639704,- | |id=chr17:4639693..4639704,- | ||
|ontology_enrichment_celltype=CL:0000766!9.80e-74!76;CL:0000557!3.13e-66!71;CL:0000839!3.72e-62!70;CL:0002009!7.65e-60!65;CL:0002194!5.38e-57!63;CL:0000576!5.38e-57!63;CL:0000040!5.38e-57!63;CL:0000559!5.38e-57!63;CL:0000763!1.29e-55!112;CL:0000049!1.29e-55!112;CL:0002057!3.16e-54!42;CL:0000860!1.33e-49!45;CL:0000738!1.52e-42!140;CL:0000037!2.98e-32!172;CL:0000566!2.98e-32!172;CL:0002032!2.70e-31!165;CL:0000837!2.70e-31!165;CL:0002031!1.54e-30!124;CL:0000988!3.56e-29!182;CL:0002087!2.98e-26!119;CL:0002393!6.88e-12!9;CL:0002397!6.88e-12!9;CL:0000094!8.08e-10!8;CL:0002274!5.43e-09!5;CL:0000457!5.43e-09!5;CL:0002191!5.43e-09!5;CL:0000097!5.43e-09!5;CL:0000831!5.43e-09!5;CL:0002028!5.43e-09!5;CL:0000453!7.80e-09!5;CL:0000990!2.83e-08!8 | |ontology_enrichment_celltype=CL:0000766!9.80e-74!76;CL:0000557!3.13e-66!71;CL:0000839!3.72e-62!70;CL:0002009!7.65e-60!65;CL:0002194!5.38e-57!63;CL:0000576!5.38e-57!63;CL:0000040!5.38e-57!63;CL:0000559!5.38e-57!63;CL:0000763!1.29e-55!112;CL:0000049!1.29e-55!112;CL:0002057!3.16e-54!42;CL:0000860!1.33e-49!45;CL:0000738!1.52e-42!140;CL:0000037!2.98e-32!172;CL:0000566!2.98e-32!172;CL:0002032!2.70e-31!165;CL:0000837!2.70e-31!165;CL:0002031!1.54e-30!124;CL:0000988!3.56e-29!182;CL:0002087!2.98e-26!119;CL:0002393!6.88e-12!9;CL:0002397!6.88e-12!9;CL:0000094!8.08e-10!8;CL:0002274!5.43e-09!5;CL:0000457!5.43e-09!5;CL:0002191!5.43e-09!5;CL:0000097!5.43e-09!5;CL:0000831!5.43e-09!5;CL:0002028!5.43e-09!5;CL:0000453!7.80e-09!5;CL:0000990!2.83e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.42e-70;33!CL:0002057;2.42e-70;33!CL:0000473;4.52e-63;39!CL:0000234;4.52e-63;39!CL:0000576;5.27e-49;48!CL:0000766;1.54e-48;69!CL:0000763;6.83e-23;100!CL:0000097;4.55e-19;5!CL:0000738;1.15e-17;136!CL:0002087;3.90e-13;104!CL:0002619;8.28e-13;3!CL:0000453;1.24e-12;5!CL:0000775;2.96e-12;3!CL:0000094;1.06e-11;8!CL:0000875;6.29e-11;3!CL:0002396;6.29e-11;3!CL:0000163;1.91e-10;9!CL:0000990;2.57e-10;8!CL:0000235;3.18e-10;6!CL:0000219;5.08e-09;193!CL:0000988;1.88e-08;177!CL:0000081;2.06e-08;11!CL:0000771;2.20e-08;2!CL:0000451;2.24e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.25e-110,72;CL:0000557,2.31e-98,67;CL:0000839,4.86e-95,66;CL:0000763,4.76e-84,108;CL:0000049,4.76e-84,108;CL:0002009,5.95e-84,61;CL:0000473,7.55e-83,48;CL:0000234,7.55e-83,48;CL:0002194,3.15e-82,59;CL:0000576,3.15e-82,59;CL:0000040,3.15e-82,59;CL:0000559,3.15e-82,59;CL:0000860,8.38e-74,42;CL:0002057,8.38e-74,42;CL:0000738,1.14e-64,136;CL:0002032,5.08e-53,161;CL:0000837,5.08e-53,161;CL:0002031,8.08e-51,120;CL:0000037,2.25e-50,168;CL:0000988,2.81e-47,177;CL:0002087,5.19e-38,115;CL:0000097,6.40e-19,5;CL:0002028,6.40e-19,5;CL:0000134,3.28e-18,354;CL:0002320,1.21e-17,361;CL:0000219,1.21e-15,386;CL:0000048,3.41e-13,427;CL:0000723,7.44e-13,433;CL:0002619,9.52e-13,3;CL:0000453,1.33e-12,5;CL:0000775,1.75e-12,3;CL:0000034,2.03e-12,441;CL:0000094,7.83e-12,8;CL:0000875,8.65e-11,3;CL:0002396,8.65e-11,3;CL:0000163,2.29e-10,9;CL:0000990,3.33e-10,8;CL:0000235,4.35e-10,6;CL:0000081,1.66e-08,11;CL:0000771,2.25e-08,2;CL:0000451,2.76e-08,10 | |||
|ontology_enrichment_development_v019=CL:0002057;4.94e-54;42!CL:0000049;2.47e-22;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.73e-56!80;UBERON:0002390!6.60e-55!102;UBERON:0003061!6.60e-55!102;UBERON:0001474!3.96e-51!86;UBERON:0002193!4.40e-51!112;UBERON:0002405!2.43e-41!115;UBERON:0004765!1.54e-40!101;UBERON:0001434!1.54e-40!101;UBERON:0003081!1.02e-19!216;UBERON:0002204!1.87e-19!167;UBERON:0007023!1.85e-15!115;UBERON:0000062!1.76e-09!511;UBERON:0001049!1.10e-07!57;UBERON:0005068!1.10e-07!57;UBERON:0006241!1.10e-07!57;UBERON:0007135!1.10e-07!57 | |ontology_enrichment_uberon=UBERON:0002371!1.73e-56!80;UBERON:0002390!6.60e-55!102;UBERON:0003061!6.60e-55!102;UBERON:0001474!3.96e-51!86;UBERON:0002193!4.40e-51!112;UBERON:0002405!2.43e-41!115;UBERON:0004765!1.54e-40!101;UBERON:0001434!1.54e-40!101;UBERON:0003081!1.02e-19!216;UBERON:0002204!1.87e-19!167;UBERON:0007023!1.85e-15!115;UBERON:0000062!1.76e-09!511;UBERON:0001049!1.10e-07!57;UBERON:0005068!1.10e-07!57;UBERON:0006241!1.10e-07!57;UBERON:0007135!1.10e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-85,76;UBERON:0001474,9.41e-79,82;UBERON:0004765,6.18e-71,90;UBERON:0002405,2.40e-68,93;UBERON:0002390,2.22e-64,98;UBERON:0003061,2.22e-64,98;UBERON:0001434,6.66e-63,100;UBERON:0002193,1.54e-57,108;UBERON:0002204,9.73e-34,167;UBERON:0003081,5.62e-26,203;UBERON:0002384,7.21e-17,371;UBERON:0000926,3.75e-13,315;UBERON:0004120,3.75e-13,315;UBERON:0006603,3.75e-13,315 | |||
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| ||
|short_description=p14@CXCL16 | |short_description=p14@CXCL16 | ||
}} | }} |
Latest revision as of 06:06, 25 September 2015
Short description: | p14@CXCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CXCL16_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_uc002fyq.3_5end |
EntrezGene: | CXCL16 |
HGNC: | 16642 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-85 | 76 |
bone element | 9.41e-79 | 82 |
skeletal element | 6.18e-71 | 90 |
immune system | 2.40e-68 | 93 |
hematopoietic system | 2.22e-64 | 98 |
blood island | 2.22e-64 | 98 |
skeletal system | 6.66e-63 | 100 |
hemolymphoid system | 1.54e-57 | 108 |
musculoskeletal system | 9.73e-34 | 167 |
lateral plate mesoderm | 5.62e-26 | 203 |
connective tissue | 7.21e-17 | 371 |
mesoderm | 3.75e-13 | 315 |
mesoderm-derived structure | 3.75e-13 | 315 |
presumptive mesoderm | 3.75e-13 | 315 |