FFCP PHASE1:Hg19::chr11:60145948..60145960,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58475,84689 | |EntrezGene=58475,84689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13378,30706 | |HGNC=13378,30706 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZW8 | |UniProt=Q9GZW8 | ||
|association_with_transcript=0bp_to_ENST00000300184,ENST00000358246,NM_021201,NM_206938,NM_206939,NM_206940,uc001npe.2,uc001npf.2,uc001npg.2,uc001nph.2,uc001npi.2,uc009ymx.1_5end | |||
|cluster_id=chr11:60145948..60145960,+ | |||
|coexpression_cluster_id=C883 | |||
|description=CAGE_peak_2_at_MS4A14_5end,CAGE_peak_2_at_MS4A7_5end | |||
|id=chr11:60145948..60145960,+ | |||
|ontology_enrichment_celltype=CL:0002194!9.09e-52!63;CL:0000576!9.09e-52!63;CL:0000040!9.09e-52!63;CL:0000559!9.09e-52!63;CL:0002009!1.41e-51!65;CL:0000766!1.46e-48!76;CL:0000557!6.98e-48!71;CL:0000839!6.54e-47!70;CL:0002057!1.02e-45!42;CL:0000860!2.02e-41!45;CL:0002087!9.06e-34!119;CL:0000738!1.50e-33!140;CL:0002031!1.37e-30!124;CL:0000763!3.67e-30!112;CL:0000049!3.67e-30!112;CL:0000037!1.31e-25!172;CL:0000566!1.31e-25!172;CL:0002032!8.36e-23!165;CL:0000837!8.36e-23!165;CL:0000988!1.36e-22!182;CL:0002393!4.35e-11!9;CL:0002397!4.35e-11!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.15e-45;39!CL:0000234;1.15e-45;39!CL:0000860;1.46e-45;33!CL:0002057;1.46e-45;33!CL:0000576;9.14e-43;48!CL:0000766;3.85e-29;69!CL:0000763;5.32e-14;100!CL:0002087;7.21e-12;104!CL:0000235;2.22e-10;6!CL:0002393;5.12e-10;6!CL:0002397;5.12e-10;6!CL:0000738;6.72e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.68e-73,48;CL:0000234,1.68e-73,48;CL:0002194,1.79e-71,59;CL:0000576,1.79e-71,59;CL:0000040,1.79e-71,59;CL:0000559,1.79e-71,59;CL:0002009,2.20e-71,61;CL:0000766,1.04e-64,72;CL:0000860,3.64e-64,42;CL:0002057,3.64e-64,42;CL:0000557,2.46e-63,67;CL:0000839,5.75e-62,66;CL:0000763,3.79e-41,108;CL:0000049,3.79e-41,108;CL:0002087,1.08e-39,115;CL:0000738,3.63e-37,136;CL:0002031,2.65e-34,120;CL:0000037,5.27e-28,168;CL:0002032,1.07e-26,161;CL:0000837,1.07e-26,161;CL:0000988,1.67e-25,177;CL:0002393,5.00e-15,9;CL:0002397,5.00e-15,9;CL:0000235,2.27e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-45;42!CL:0000049;1.82e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.66e-51!102;UBERON:0003061!6.66e-51!102;UBERON:0002193!2.20e-46!112;UBERON:0002371!1.78e-42!80;UBERON:0007023!2.02e-42!115;UBERON:0001474!6.59e-39!86;UBERON:0002405!3.51e-35!115;UBERON:0004765!1.86e-30!101;UBERON:0001434!1.86e-30!101;UBERON:0003081!1.50e-17!216;UBERON:0002204!3.81e-12!167;UBERON:0000062!7.65e-11!511;UBERON:0001049!2.54e-10!57;UBERON:0005068!2.54e-10!57;UBERON:0006241!2.54e-10!57;UBERON:0007135!2.54e-10!57;UBERON:0000479!2.95e-08!787;UBERON:0000922!9.58e-08!612;UBERON:0003080!1.00e-07!42;UBERON:0002050!1.20e-07!605;UBERON:0005423!1.20e-07!605;UBERON:0002616!1.93e-07!59;UBERON:0000467!2.03e-07!625;UBERON:0000923!2.19e-07!604;UBERON:0005291!2.19e-07!604;UBERON:0006598!2.19e-07!604;UBERON:0002532!2.19e-07!604;UBERON:0000480!2.45e-07!626;UBERON:0002780!3.00e-07!41;UBERON:0001890!3.00e-07!41;UBERON:0006240!3.00e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.83e-63,98;UBERON:0003061,1.83e-63,98;UBERON:0002193,1.80e-57,108;UBERON:0002371,1.69e-55,76;UBERON:0002405,1.36e-51,93;UBERON:0001474,4.61e-50,82;UBERON:0004765,5.98e-44,90;UBERON:0001434,1.07e-37,100;UBERON:0003081,2.33e-29,203;UBERON:0007023,7.08e-18,114;UBERON:0002204,3.96e-17,167;UBERON:0000926,2.11e-15,315;UBERON:0004120,2.11e-15,315;UBERON:0006603,2.11e-15,315;UBERON:0000923,1.10e-08,560;UBERON:0010316,1.10e-08,560;UBERON:0005291,1.10e-08,560;UBERON:0006598,1.10e-08,560;UBERON:0010317,1.10e-08,560;UBERON:0002532,1.10e-08,560;UBERON:0002050,2.00e-08,564;UBERON:0005423,9.03e-08,581;UBERON:0000922,4.14e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5876568591649,5.75744097145819,5.72819656269481,0,0,0,0,0,0.293600439334847,6.64794490238253,7.42014455639524,2.60413044859022,30.0046735481499,20.7291946252147,28.0757368721263,35.0409755458751,10.2026504795979,22.8029017516547,65.3125593704974,9.45686142450199,22.6085650753426,26.75539248596,5.89169625016932,17.0267205519781,66.5359163821674,9.68227025375739,18.9597081232078,41.2250723598304,4.09359225086769,32.5849052445373,116.005795208572,7.06043859567406,38.3602275479425,18.1418215102694,5.78444607102732,14.9178662686443,103.024279713147,8.5107783703671,37.9921571887301,23.6173745341339,5.73631210262222,13.4657083717172,92.0207244002721,6.62899744777616,41.4565727547559,39.5047385403331,45.9225287924494,28.5135757891391,6.06574608191074,8.86043667764887,12.2151445889781,94.6242309220945,115.96842280707,108.502507336193,0,0,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,1.32208974556972,0,0,0,0,0,1.68152568894461,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,1.05402583354441,0.255973222308837,1.24930726552346,1.18388626022008,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79839318943367,0,0,1.62273696827342,0.870648686496336,1.59549552622638,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7730203652438,7.02012795417713,8.9178697373237,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0273292897667,41.1850814974344,40.058448501776,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,7.11856862701436,3.20182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44936295511323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5670858706869,0,0,0,0,1.52234282769651,0.764637207142375,2.27858874869665,0.952927101831156,2.46817363851717,0,2.70015718619057,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,1.27753871307098,1.37402137902306,0.921722292925374,0.223676107892416,2.0021897005429,0.19538809540204,0,0,0,0,0,0,6.29985170869144,0,0,0,0,0.593929361665277,0,0,1.54736358051564,0,0,0,4.18420775327246,2.21027132424918,0,0,0,0,0,0,0,1.28236427328014,7.18449277040819,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,1.08536794762867,0,0.552896299656123,0,0.438770794307945,0,0,0.615602068030377,0,0,0,0,0,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85760885457012,4.888241159469,0,0,0,0.337005664903385,1.60515529459758,0.234264445725339,0,0,0,0.789168805698781,2.41981432097328,0,2.78020950365347,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.26085721434945,0.0882561266915003,0.90392296312213,0,0,0.0633107959558787,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,1.11712960508902,1.14580212005842,0,0.599037001496973,0,1.78537165953498,0.470284307407084,0,0,0,0,0,0,0,3.18091875923721,0.953423842781029,0,0,0,6.52424285499351,0,0.607495566580247,0,1.57611414598396,0.314727528809989,0,0,0,3.57347663186684,3.31045985182716,0,0,0,0,0,0,0,0,11.1379697595343,10.6005511129777,0.775697738169303,1.19009341568421,0,0,12.8144895081234,0.628817220398664,21.5404308780542,5.95399226174341,0,0,0,0,0.2506898940227,0.919036730290385,0,0,0,0.366078794705889,1.1267183763585,0.573409195690071,2.10765197920019,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.902523940191087,0,1.56302802246618,0,0,0,0.202612753855184,0,0,0.317079050969534,0,0,1.48863353516788,0,0,2.14280734351315,1.68141861109412,2.42786241694653,1.82129753081038,1.5966426629275,0.576169937778896,0,0.203909198930495,0,0,0,1.25588948560822,0.785577949580009,0,1.82631744101899,0,0,1.6439605160631,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.307988420568741,0,2.4285549652957,0,0,0,0,0,0,2.54674721756217,0.218559560503957,0,0.980593287015622,0,2.74831853960923,1.78227840196252,0.4226557275834,0,69.5480993050917,16.5656772092093,0.199882311849858,0,0,0,0,0.917458566809082,0.430018749454354,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.59135266258303,0.803892390468535,0,0.413731983447581,1.0661699095049,0.476128862927481,2.32520075409622,3.66240814345562,0,0.509177266225319,1.21270313374932,0.435433495793923,0.342233301085281,0.336760265072938,2.22338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| ||
|short_description=p2@MS4A14,p2@MS4A7 | |||
}} | }} |
Latest revision as of 13:28, 18 September 2015
Short description: | p2@MS4A14, p2@MS4A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MS4A14_5end, CAGE_peak_2_at_MS4A7_5end |
Coexpression cluster: | C883_CD14_CD14CD16_Monocytederived_spleen_Macrophage_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000300184, ENST00000358246, NM_021201, NM_206938, NM_206939, NM_206940, uc001npe.2, uc001npf.2, uc001npg.2, uc001nph.2, uc001npi.2, uc009ymx.1_5end |
EntrezGene: | 58475,84689 |
HGNC: | 30706&submit=Submit 13378, 30706 |
UniProt: | Q9GZW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.68e-73 | 48 |
phagocyte | 1.68e-73 | 48 |
monopoietic cell | 1.79e-71 | 59 |
monocyte | 1.79e-71 | 59 |
monoblast | 1.79e-71 | 59 |
promonocyte | 1.79e-71 | 59 |
macrophage dendritic cell progenitor | 2.20e-71 | 61 |
myeloid leukocyte | 1.04e-64 | 72 |
classical monocyte | 3.64e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.64e-64 | 42 |
granulocyte monocyte progenitor cell | 2.46e-63 | 67 |
myeloid lineage restricted progenitor cell | 5.75e-62 | 66 |
myeloid cell | 3.79e-41 | 108 |
common myeloid progenitor | 3.79e-41 | 108 |
nongranular leukocyte | 1.08e-39 | 115 |
leukocyte | 3.63e-37 | 136 |
hematopoietic lineage restricted progenitor cell | 2.65e-34 | 120 |
hematopoietic stem cell | 5.27e-28 | 168 |
hematopoietic oligopotent progenitor cell | 1.07e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-26 | 161 |
hematopoietic cell | 1.67e-25 | 177 |
intermediate monocyte | 5.00e-15 | 9 |
CD14-positive, CD16-positive monocyte | 5.00e-15 | 9 |
macrophage | 2.27e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.83e-63 | 98 |
blood island | 1.83e-63 | 98 |
hemolymphoid system | 1.80e-57 | 108 |
bone marrow | 1.69e-55 | 76 |
immune system | 1.36e-51 | 93 |
bone element | 4.61e-50 | 82 |
skeletal element | 5.98e-44 | 90 |
skeletal system | 1.07e-37 | 100 |
lateral plate mesoderm | 2.33e-29 | 203 |
adult organism | 7.08e-18 | 114 |
musculoskeletal system | 3.96e-17 | 167 |
mesoderm | 2.11e-15 | 315 |
mesoderm-derived structure | 2.11e-15 | 315 |
presumptive mesoderm | 2.11e-15 | 315 |
germ layer | 1.10e-08 | 560 |
germ layer / neural crest | 1.10e-08 | 560 |
embryonic tissue | 1.10e-08 | 560 |
presumptive structure | 1.10e-08 | 560 |
germ layer / neural crest derived structure | 1.10e-08 | 560 |
epiblast (generic) | 1.10e-08 | 560 |
embryonic structure | 2.00e-08 | 564 |
developing anatomical structure | 9.03e-08 | 581 |
embryo | 4.14e-07 | 592 |