FFCP PHASE1:Hg19::chr17:43045024..43045035,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10882 | |EntrezGene=10882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24182 | |HGNC=24182 | ||
|TSSclassifier=strong | |||
|UniProt=O75973 | |UniProt=O75973 | ||
|association_with_transcript=393bp_to_AF095154_5end | |association_with_transcript=393bp_to_AF095154_5end | ||
|cluster_id=chr17:43045024..43045035,- | |||
|coexpression_cluster_id=C2411 | |||
|description=CAGE_peak_6_at_C1QL1_5end | |description=CAGE_peak_6_at_C1QL1_5end | ||
|id=chr17:43045024..43045035,- | |id=chr17:43045024..43045035,- | ||
|ontology_enrichment_celltype=CL:0002319!6.40e-12!25;CL:0000047!2.34e-10!8;CL:0000540!4.83e-10!6;CL:0000031!4.83e-10!6;CL:0000404!4.83e-10!6;CL:0002605!2.13e-08!3 | |ontology_enrichment_celltype=CL:0002319!6.40e-12!25;CL:0000047!2.34e-10!8;CL:0000540!4.83e-10!6;CL:0000031!4.83e-10!6;CL:0000404!4.83e-10!6;CL:0002605!2.13e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.07e-17;2!CL:0002605;2.89e-12;3!CL:0000306;1.27e-09;4!CL:0002222;1.27e-09;4!CL:0002224;1.27e-09;4!CL:0000669;1.57e-09;4!CL:1000497;8.55e-09;17!CL:0002518;8.55e-09;17!CL:0000540;7.80e-07;6!CL:0000404;7.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.07e-17,2;CL:0002605,3.24e-12,3;CL:0000306,1.22e-09,4;CL:0002222,1.22e-09,4;CL:0002224,1.22e-09,4;CL:0000669,1.57e-09,4;CL:1000497,8.23e-09,17;CL:0002518,8.23e-09,17;CL:0000540,8.02e-07,6;CL:0000031,8.02e-07,6;CL:0000404,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.04e-14;10!UBERON:0007687;3.04e-14;10!CL:0000031;7.80e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!8.99e-07!143 | |ontology_enrichment_disease=DOID:0050687!8.99e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.81e-19!82;UBERON:0005743!1.57e-17!86;UBERON:0000073!2.51e-16!94;UBERON:0001016!2.51e-16!94;UBERON:0001049!3.29e-14!57;UBERON:0005068!3.29e-14!57;UBERON:0006241!3.29e-14!57;UBERON:0007135!3.29e-14!57;UBERON:0000955!7.26e-13!69;UBERON:0006238!7.26e-13!69;UBERON:0002616!4.17e-12!59;UBERON:0002020!5.16e-11!34;UBERON:0003528!5.16e-11!34;UBERON:0002346!8.66e-10!90;UBERON:0003075!1.56e-09!86;UBERON:0007284!1.56e-09!86;UBERON:0002298!1.83e-09!8;UBERON:0001893!2.10e-09!34;UBERON:0001869!1.24e-08!32;UBERON:0002780!1.95e-08!41;UBERON:0001890!1.95e-08!41;UBERON:0006240!1.95e-08!41;UBERON:0002791!1.98e-08!33;UBERON:0003076!3.22e-08!15;UBERON:0003057!3.22e-08!15;UBERON:0003080!3.68e-08!42;UBERON:0004733!4.82e-08!12;UBERON:0002028!4.82e-08!12;UBERON:0007277!4.82e-08!12;UBERON:0000924!6.69e-08!173;UBERON:0006601!6.69e-08!173;UBERON:0004121!1.26e-07!169;UBERON:0006331!2.37e-07!3;UBERON:0004732!2.41e-07!13;UBERON:0000988!6.00e-07!3;UBERON:0000033!8.91e-07!123;UBERON:0000956!9.11e-07!25;UBERON:0000203!9.11e-07!25 | |ontology_enrichment_uberon=UBERON:0001017!8.81e-19!82;UBERON:0005743!1.57e-17!86;UBERON:0000073!2.51e-16!94;UBERON:0001016!2.51e-16!94;UBERON:0001049!3.29e-14!57;UBERON:0005068!3.29e-14!57;UBERON:0006241!3.29e-14!57;UBERON:0007135!3.29e-14!57;UBERON:0000955!7.26e-13!69;UBERON:0006238!7.26e-13!69;UBERON:0002616!4.17e-12!59;UBERON:0002020!5.16e-11!34;UBERON:0003528!5.16e-11!34;UBERON:0002346!8.66e-10!90;UBERON:0003075!1.56e-09!86;UBERON:0007284!1.56e-09!86;UBERON:0002298!1.83e-09!8;UBERON:0001893!2.10e-09!34;UBERON:0001869!1.24e-08!32;UBERON:0002780!1.95e-08!41;UBERON:0001890!1.95e-08!41;UBERON:0006240!1.95e-08!41;UBERON:0002791!1.98e-08!33;UBERON:0003076!3.22e-08!15;UBERON:0003057!3.22e-08!15;UBERON:0003080!3.68e-08!42;UBERON:0004733!4.82e-08!12;UBERON:0002028!4.82e-08!12;UBERON:0007277!4.82e-08!12;UBERON:0000924!6.69e-08!173;UBERON:0006601!6.69e-08!173;UBERON:0004121!1.26e-07!169;UBERON:0006331!2.37e-07!3;UBERON:0004732!2.41e-07!13;UBERON:0000988!6.00e-07!3;UBERON:0000033!8.91e-07!123;UBERON:0000956!9.11e-07!25;UBERON:0000203!9.11e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.27e-09;4!UBERON:0005389;1.27e-09;4!UBERON:0000484;1.27e-09;4!UBERON:0000965;1.27e-09;4!UBERON:0001803;1.27e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.22e-09,4;UBERON:0005389,1.22e-09,4;UBERON:0000484,1.22e-09,4;UBERON:0002546,1.22e-09,4;UBERON:0000965,1.22e-09,4;UBERON:0001803,1.22e-09,4;UBERON:0003073,1.22e-09,4;UBERON:0005426,1.22e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.410623275218653,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,2.31986643833309,0.167516265334349,0.637938751653163,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0.868124974666461,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.859930162358083,0,0,0,0,0,0.90392296312213,0,0,0,0.195551382734803,0,0,0,0,0,0.857974989309823,0,0,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.1251909307065,0,0.332787154610557,0.18628920882415,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0.192914038270915,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0.982829546539238,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0.247871528518004,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,0.628462359664008,0,0,5.18226218924691,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0.795803100645473,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.410623275218653,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,2.31986643833309,0.167516265334349,0.637938751653163,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0.868124974666461,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.859930162358083,0,0,0,0,0,0.90392296312213,0,0,0,0.195551382734803,0,0,0,0,0,0.857974989309823,0,0,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.1251909307065,0,0.332787154610557,0.18628920882415,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0.192914038270915,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0.982829546539238,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0.247871528518004,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,0.628462359664008,0,0,5.18226218924691,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0.795803100645473,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@C1QL1 | |short_description=p6@C1QL1 | ||
}} | }} |
Latest revision as of 00:09, 25 September 2015
Short description: | p6@C1QL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C1QL1_5end |
Coexpression cluster: | C2411_renal_anaplastic_medulla_argyrophil_Astrocyte_pleomorphic_mesothelioma |
Association with transcript: | 393bp_to_AF095154_5end |
EntrezGene: | C1QL1 |
HGNC: | 24182 |
UniProt: | O75973 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.07e-17 | 2 |
astrocyte of the cerebral cortex | 3.24e-12 | 3 |
crystallin accumulating cell | 1.22e-09 | 4 |
vertebrate lens cell | 1.22e-09 | 4 |
lens epithelial cell | 1.22e-09 | 4 |
pericyte cell | 1.57e-09 | 4 |
kidney cell | 8.23e-09 | 17 |
kidney epithelial cell | 8.23e-09 | 17 |
neuron | 8.02e-07 | 6 |
neuroblast | 8.02e-07 | 6 |
electrically signaling cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.22e-09 | 4 |
transparent eye structure | 1.22e-09 | 4 |
simple cuboidal epithelium | 1.22e-09 | 4 |
cranial placode | 1.22e-09 | 4 |
lens of camera-type eye | 1.22e-09 | 4 |
epithelium of lens | 1.22e-09 | 4 |
lens placode | 1.22e-09 | 4 |
lens vesicle | 1.22e-09 | 4 |