FFCP PHASE1:Hg19::chr11:120207249..120207274,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23365 | |EntrezGene=23365 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14193 | |HGNC=14193 | ||
|TSSclassifier=strong | |||
|UniProt=B4E2K6,Q9NZN5 | |UniProt=B4E2K6,Q9NZN5 | ||
|association_with_transcript=-343bp_to_NM_001198665,NM_015313_5end | |||
|cluster_id=chr11:120207249..120207274,+ | |||
|description=CAGE_peak_4_at_ARHGEF12_5end | |||
|id=chr11:120207249..120207274,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.51e-16!115;UBERON:0000468!4.55e-15!659;UBERON:0000467!5.08e-12!625;UBERON:0000480!5.73e-12!626;UBERON:0004119!1.28e-11!169;UBERON:0000925!1.28e-11!169;UBERON:0006595!1.28e-11!169;UBERON:0000481!3.52e-11!347;UBERON:0001007!6.41e-11!155;UBERON:0001555!6.41e-11!155;UBERON:0007026!6.41e-11!155;UBERON:0000475!3.34e-09!365;UBERON:0003104!8.76e-09!238;UBERON:0009142!8.76e-09!238;UBERON:0000477!2.68e-08!286;UBERON:0002050!3.26e-08!605;UBERON:0005423!3.26e-08!605;UBERON:0002100!3.98e-08!216;UBERON:0000923!6.03e-08!604;UBERON:0005291!6.03e-08!604;UBERON:0006598!6.03e-08!604;UBERON:0002532!6.03e-08!604;UBERON:0000922!6.07e-08!612;UBERON:0000165!7.29e-08!28;UBERON:0000930!7.29e-08!28;UBERON:0004111!2.20e-07!241;UBERON:0003102!2.85e-07!95;UBERON:0000161!4.13e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;2.80e-08;28!UBERON:0004921;2.88e-07;33!UBERON:0001555;4.87e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.66e-16,114;UBERON:0004119,2.52e-12,160;UBERON:0000925,2.52e-12,160;UBERON:0006595,2.52e-12,160;UBERON:0001007,1.64e-11,145;UBERON:0001555,1.64e-11,145;UBERON:0007026,1.64e-11,145;UBERON:0000165,2.90e-08,29;UBERON:0000930,2.90e-08,29;UBERON:0002050,2.22e-07,564;UBERON:0005423,3.18e-07,581;UBERON:0003102,3.87e-07,99;UBERON:0000161,3.87e-07,36;UBERON:0003104,3.92e-07,160;UBERON:0009142,3.92e-07,160;UBERON:0000166,5.79e-07,22;UBERON:0000923,7.87e-07,560;UBERON:0010316,7.87e-07,560;UBERON:0005291,7.87e-07,560;UBERON:0006598,7.87e-07,560;UBERON:0010317,7.87e-07,560;UBERON:0002532,7.87e-07,560 | |||
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| ||
|short_description=p4@ARHGEF12 | |||
}} | }} |
Latest revision as of 05:23, 16 September 2015
Short description: | p4@ARHGEF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGEF12_5end |
Coexpression cluster: | NA |
Association with transcript: | -343bp_to_NM_001198665, NM_015313_5end |
EntrezGene: | ARHGEF12 |
HGNC: | 14193 |
UniProt: | B4E2K6Q9NZN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.66e-16 | 114 |
endoderm-derived structure | 2.52e-12 | 160 |
endoderm | 2.52e-12 | 160 |
presumptive endoderm | 2.52e-12 | 160 |
digestive system | 1.64e-11 | 145 |
digestive tract | 1.64e-11 | 145 |
primitive gut | 1.64e-11 | 145 |
mouth | 2.90e-08 | 29 |
stomodeum | 2.90e-08 | 29 |
embryonic structure | 2.22e-07 | 564 |
developing anatomical structure | 3.18e-07 | 581 |
surface structure | 3.87e-07 | 99 |
orifice | 3.87e-07 | 36 |
mesenchyme | 3.92e-07 | 160 |
entire embryonic mesenchyme | 3.92e-07 | 160 |
oral opening | 5.79e-07 | 22 |
germ layer | 7.87e-07 | 560 |
germ layer / neural crest | 7.87e-07 | 560 |
embryonic tissue | 7.87e-07 | 560 |
presumptive structure | 7.87e-07 | 560 |
germ layer / neural crest derived structure | 7.87e-07 | 560 |
epiblast (generic) | 7.87e-07 | 560 |