FFCP PHASE1:Hg19::chr17:38711909..38711920,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38711909..38711920,- | |||
|coexpression_cluster_id=C762 | |||
|description=CAGE_peak_at_chr17:38711909..38711920,- | |description=CAGE_peak_at_chr17:38711909..38711920,- | ||
|id=chr17:38711909..38711920,- | |id=chr17:38711909..38711920,- | ||
|ontology_enrichment_celltype=CL:0000738!1.91e-31!140;CL:0000542!4.03e-29!53;CL:0000051!4.03e-29!53;CL:0002087!4.09e-29!119;CL:0000838!1.94e-27!52;CL:0002031!4.99e-26!124;CL:0000988!2.41e-25!182;CL:0002032!1.45e-23!165;CL:0000837!1.45e-23!165;CL:0000037!2.07e-23!172;CL:0000566!2.07e-23!172;CL:0000084!1.83e-18!25;CL:0000827!1.83e-18!25;CL:0000791!1.60e-16!18;CL:0000789!1.60e-16!18;CL:0002420!1.60e-16!18;CL:0002419!1.60e-16!18;CL:0000790!1.60e-16!18;CL:0000625!1.62e-11!11;CL:0000945!2.49e-10!24;CL:0000826!2.49e-10!24;CL:0000453!2.83e-10!5;CL:0002057!1.09e-08!42;CL:0000990!4.06e-08!8;CL:0000860!6.44e-08!45;CL:0000624!9.51e-08!6;CL:0000080!1.75e-07!6 | |ontology_enrichment_celltype=CL:0000738!1.91e-31!140;CL:0000542!4.03e-29!53;CL:0000051!4.03e-29!53;CL:0002087!4.09e-29!119;CL:0000838!1.94e-27!52;CL:0002031!4.99e-26!124;CL:0000988!2.41e-25!182;CL:0002032!1.45e-23!165;CL:0000837!1.45e-23!165;CL:0000037!2.07e-23!172;CL:0000566!2.07e-23!172;CL:0000084!1.83e-18!25;CL:0000827!1.83e-18!25;CL:0000791!1.60e-16!18;CL:0000789!1.60e-16!18;CL:0002420!1.60e-16!18;CL:0002419!1.60e-16!18;CL:0000790!1.60e-16!18;CL:0000625!1.62e-11!11;CL:0000945!2.49e-10!24;CL:0000826!2.49e-10!24;CL:0000453!2.83e-10!5;CL:0002057!1.09e-08!42;CL:0000990!4.06e-08!8;CL:0000860!6.44e-08!45;CL:0000624!9.51e-08!6;CL:0000080!1.75e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000453;8.13e-17;5!CL:0000771;3.02e-11;2!CL:0000990;8.83e-10;8!CL:0000451;3.62e-08;10!CL:0000945;4.52e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.45e-17,5;CL:0000771,3.02e-11,2;CL:0000990,7.08e-10,8;CL:0000451,3.03e-08,10;CL:0000945,5.36e-08,24;CL:0000826,5.36e-08,24;CL:0000738,8.11e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;4.22e-21;1!DOID:0050177;4.22e-21;1!DOID:0050427;4.22e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.31e-21,1;DOID:0050177,6.31e-21,1;DOID:0050427,6.31e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.06e-11!102;UBERON:0003061!1.06e-11!102;UBERON:0002193!3.94e-11!112;UBERON:0000178!2.55e-08!15;UBERON:0000179!2.55e-08!15;UBERON:0000463!2.55e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.52e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.52e-08,3;UBERON:0004854,4.52e-08,3;UBERON:0009034,4.52e-08,3;UBERON:0002095,4.52e-08,3;UBERON:0004782,4.52e-08,3;UBERON:0003281,4.52e-08,3;UBERON:0009664,4.52e-08,3;UBERON:0002296,4.52e-08,3;UBERON:0005602,4.52e-08,3;UBERON:0001179,4.52e-08,3;UBERON:0006293,4.52e-08,3 | |||
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| ||
|short_description=p@chr17:38711909..38711920,- | |short_description=p@chr17:38711909..38711920,- | ||
}} | }} |
Latest revision as of 16:33, 25 July 2015
Short description: | p@chr17:38711909..38711920, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38711909..38711920, - |
Coexpression cluster: | C762_splenic_migratory_b_B_cord_CD14_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.45e-17 | 5 |
eosinophil | 3.02e-11 | 2 |
conventional dendritic cell | 7.08e-10 | 8 |
dendritic cell | 3.03e-08 | 10 |
lymphocyte of B lineage | 5.36e-08 | 24 |
pro-B cell | 5.36e-08 | 24 |
leukocyte | 8.11e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.52e-08 | 3 |
gastrointestinal system mesentery | 4.52e-08 | 3 |
stomach region | 4.52e-08 | 3 |
mesentery | 4.52e-08 | 3 |
gastrointestinal system serosa | 4.52e-08 | 3 |
mesentery of stomach | 4.52e-08 | 3 |
gut mesentery | 4.52e-08 | 3 |
dorsal mesentery | 4.52e-08 | 3 |
dorsal mesogastrium | 4.52e-08 | 3 |
peritoneal cavity | 4.52e-08 | 3 |
spleen primordium | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.31e-21 | 1 |
monogenic disease | 6.31e-21 | 1 |
xeroderma pigmentosum | 6.31e-21 | 1 |