FFCP PHASE1:Hg19::chr21:45671797..45671832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:45671797..45671832,- | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_at_chr21:45671797..45671832,- | |description=CAGE_peak_at_chr21:45671797..45671832,- | ||
|id=chr21:45671797..45671832,- | |id=chr21:45671797..45671832,- | ||
|ontology_enrichment_celltype=CL:0000515!2.34e-12!4;CL:0000188!6.94e-08!9 | |ontology_enrichment_celltype=CL:0000515!2.34e-12!4;CL:0000188!6.94e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000319;7.48e-30;1!CL:0000228;2.37e-29;1!CL:0002372;2.37e-29;1!CL:0000159;1.15e-15;2!CL:0000650;2.05e-15;2!CL:1000500;2.05e-15;2!CL:1000618;2.05e-15;2!CL:1001318;2.05e-15;2!CL:0002173;2.05e-15;2!CL:0000056;2.26e-08;4!CL:0000669;2.26e-08;4!CL:0000737;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,7.48e-30,1;CL:0000228,2.37e-29,1;CL:0002372,2.37e-29,1;CL:0000159,1.15e-15,2;CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:0000737,2.26e-08,4;CL:0000515,2.26e-08,4;CL:0000669,2.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.32e-16;29!CL:0000515;2.26e-08;4 | |||
|ontology_enrichment_disease=DOID:305!6.63e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:3030;7.48e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.48e-30,1;DOID:305,5.20e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.18e-28!9;UBERON:0001557!5.27e-18!19;UBERON:0000072!3.34e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.49e-50;9!UBERON:0001557;2.49e-50;9!UBERON:0003567;2.05e-15;2!UBERON:0003838;2.05e-15;2!UBERON:0003586;2.05e-15;2!UBERON:0005169;2.05e-15;2!UBERON:0002321;2.05e-15;2!UBERON:0005215;2.05e-15;2!UBERON:0002303;2.05e-15;2!UBERON:0002319;2.05e-15;2!UBERON:0000072;6.12e-12;37!UBERON:0000065;6.14e-12;44!UBERON:0003891;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.93e-50,9;UBERON:0001557,2.77e-24,19;UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0008947,1.95e-12,38;UBERON:0003258,1.95e-12,38;UBERON:0000072,3.78e-10,47;UBERON:0000065,6.83e-09,54;UBERON:0003891,2.61e-08,4 | |||
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| ||
|short_description=p@chr21:45671797..45671832,- | |short_description=p@chr21:45671797..45671832,- | ||
}} | }} |
Latest revision as of 18:27, 28 July 2015
Short description: | p@chr21:45671797..45671832, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:45671797..45671832, - |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 7.48e-30 | 1 |
multinucleate cell | 2.37e-29 | 1 |
myotube | 2.37e-29 | 1 |
seromucus secreting cell | 1.15e-15 | 2 |
mesangial cell | 2.74e-15 | 2 |
kidney interstitial cell | 2.74e-15 | 2 |
juxtaglomerular complex cell | 2.74e-15 | 2 |
renal interstitial pericyte | 2.74e-15 | 2 |
extraglomerular mesangial cell | 2.74e-15 | 2 |
striated muscle cell | 2.26e-08 | 4 |
skeletal muscle myoblast | 2.26e-08 | 4 |
pericyte cell | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.93e-50 | 9 |
upper respiratory tract | 2.77e-24 | 19 |
abdomen connective tissue | 2.74e-15 | 2 |
abdominal segment connective tissue | 2.74e-15 | 2 |
trunk connective tissue | 2.74e-15 | 2 |
interstitial tissue | 2.74e-15 | 2 |
extraglomerular mesangium | 2.74e-15 | 2 |
kidney interstitium | 2.74e-15 | 2 |
juxtaglomerular apparatus | 2.74e-15 | 2 |
mesangium | 2.74e-15 | 2 |
respiratory primordium | 1.95e-12 | 38 |
endoderm of foregut | 1.95e-12 | 38 |
segment of respiratory tract | 3.78e-10 | 47 |
respiratory tract | 6.83e-09 | 54 |
stroma | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.48e-30 | 1 |
carcinoma | 5.20e-07 | 106 |