FFCP PHASE1:Hg19::chr17:34900880..34900893,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79893 | |EntrezGene=79893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19357 | |HGNC=19357 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_ENST00000486208_5end | |association_with_transcript=64bp_to_ENST00000486208_5end | ||
|cluster_id=chr17:34900880..34900893,+ | |||
|description=CAGE_peak_4_at_GGNBP2_5end | |description=CAGE_peak_4_at_GGNBP2_5end | ||
|id=chr17:34900880..34900893,+ | |id=chr17:34900880..34900893,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.56e-14!140;CL:0000988!6.70e-13!182;CL:0000037!2.35e-12!172;CL:0000566!2.35e-12!172;CL:0002031!2.43e-10!124;CL:0002032!3.38e-10!165;CL:0000837!3.38e-10!165;CL:0002087!5.65e-09!119;CL:0000766!4.42e-07!76 | |ontology_enrichment_celltype=CL:0000738!8.56e-14!140;CL:0000988!6.70e-13!182;CL:0000037!2.35e-12!172;CL:0000566!2.35e-12!172;CL:0002031!2.43e-10!124;CL:0002032!3.38e-10!165;CL:0000837!3.38e-10!165;CL:0002087!5.65e-09!119;CL:0000766!4.42e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000081;1.23e-10;11!CL:0000791;9.54e-09;18!CL:0000789;9.54e-09;18!CL:0002419;9.54e-09;18!CL:0000094;4.68e-08;8!CL:0000840;1.72e-07;5!CL:0002393;2.41e-07;6!CL:0002397;2.41e-07;6!CL:0000766;2.51e-07;69!CL:0000624;7.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.70e-29,136;CL:0000988,9.31e-26,177;CL:0000037,7.70e-24,168;CL:0002031,1.81e-21,120;CL:0002032,5.62e-20,161;CL:0000837,5.62e-20,161;CL:0002087,1.34e-18,115;CL:0000766,6.08e-18,72;CL:0000557,4.46e-15,67;CL:0000839,5.95e-13,66;CL:0000763,9.82e-13,108;CL:0000049,9.82e-13,108;CL:0002009,2.78e-11,61;CL:0000081,1.44e-10,11;CL:0002393,3.22e-10,9;CL:0002397,3.22e-10,9;CL:0000473,4.04e-10,48;CL:0000234,4.04e-10,48;CL:0002194,6.71e-10,59;CL:0000576,6.71e-10,59;CL:0000040,6.71e-10,59;CL:0000559,6.71e-10,59;CL:0000134,5.96e-09,354;CL:0000791,8.68e-09,18;CL:0000789,8.68e-09,18;CL:0002420,8.68e-09,18;CL:0002419,8.68e-09,18;CL:0000790,8.68e-09,18;CL:0000860,2.38e-08,42;CL:0002057,2.38e-08,42;CL:0002320,2.81e-08,361;CL:0000094,3.82e-08,8;CL:0000838,1.17e-07,52;CL:0000840,1.21e-07,5;CL:0001029,1.21e-07,5;CL:0000542,2.22e-07,53;CL:0000051,2.22e-07,53;CL:0000034,2.23e-07,441;CL:0000048,2.62e-07,427;CL:0000723,7.83e-07,433;CL:0000624,7.90e-07,6;CL:0000451,9.25e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000790;9.54e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.02e-08!102;UBERON:0003061!9.02e-08!102;UBERON:0002193!4.21e-07!112 | |ontology_enrichment_uberon=UBERON:0002390!9.02e-08!102;UBERON:0003061!9.02e-08!102;UBERON:0002193!4.21e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.03e-09;15!UBERON:0000179;4.03e-09;15!UBERON:0000463;4.03e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.44e-18,98;UBERON:0003061,1.44e-18,98;UBERON:0002193,6.56e-17,108;UBERON:0002371,1.36e-13,76;UBERON:0001474,2.08e-12,82;UBERON:0002405,7.34e-11,93;UBERON:0004765,3.09e-10,90;UBERON:0000178,4.09e-09,15;UBERON:0000179,4.09e-09,15;UBERON:0000463,4.09e-09,15;UBERON:0001434,4.49e-09,100;UBERON:0002384,9.74e-08,371 | |||
|phase1_expression=1.09007027562334,0.214100523890983,1.26858963686374,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0.246242116153576,0,0,0,0.136874425072884,0.87879847716362,0.0764134057479513,0,0.0787107813136792,4.32700704533794,4.98978217526377,3.8704030829019,0,0.90361775633475,0,1.00707360754392,0,1.46800219667424,2.76997704265939,4.61252229181326,4.34021741431704,0.895661896959697,0.647787332037959,0.77272670290256,0.290796477559129,0,1.4555043671269,0,0,4.33588919253145,0,0,2.83778675866302,0,0,1.35426486594342,0.188242339542605,0,4.26974620445661,0,0,3.19668562899521,0,0,3.40979800426155,0,0,3.73693349397345,0.502497330513487,0,4.99534342821768,0,0,3.16462387440884,1.47878700418359,2.97646019951061,4.40283155567589,2.13424399178341,3.00353785683013,3.37523732063868,1.14005097496499,5.17183360717634,3.47061892152804,0,0.546138611262131,4.44754626931777,0,0.800791974072025,1.72425731986345,2.64417949113945,1.90810750907073,3.98449078376614,7.6340834618222,5.3518251937532,3.96513985737078,5.04457706683382,1.84368859342554,4.52432471261816,2.75107533924415,2.46721798799411,1.33749196312542,2.93330039970231,6.15482147455153,0,0.111410456885174,2.3568472597987,5.09527957542329,2.70803863765016,0.512365278902701,1.8208308658383,1.15106533222573,2.48715016007264,1.15921234294021,1.63115219478266,4.28065324943541,7.31748666634838,0.679856056185397,1.14966148080576,5.49803912772208,5.06039384039006,2.22995790026868,1.95325036156926,4.75226022224187,0.301150238155546,0.127986611154418,0,0.947109008176067,3.28451198768419,3.83052812126992,4.27904313253612,3.04131248153878,4.87613732627923,1.34140171940727,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0.486634870302636,0.378139268656271,1.77383517970051,1.31752178539689,0.72038491523742,0,0,1.62273696827342,2.96020553408754,2.39324328933957,13.1169843367938,7.43593384014166,7.05769252526173,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0.35576626268671,1.33888245105868,0.402829317109147,0,0.732186172644509,0.367663080345869,0,0.803697554556718,1.34717623575702,0.337834441449967,0,0,0.732806975721629,3.9534125230819,3.87780264148325,0.872188104285069,1.49091585508596,0,1.32409180813219,1.14734648299525,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.404132016209064,0,0.302714855289863,0,0,0,0,0.448346041655403,0,0,0,0.204154171254893,0,0,0,0,0,0,1.0100166837244,0.500474079487857,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0.538168907066586,0,0,0,0,0.772921620136887,0,0.168776332241266,0,0.757301322732344,0.828449087780694,2.42469085228218,2.84007674013291,1.41052937518696,0.508681776931463,0,0,0.573609190778008,0,0.265059536642971,0.116193942869518,0.414644220061482,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0.857839051492628,0.439001141634502,0,0.100528972411631,0.462942225792648,0.325808305310325,0,0,0.463721619900307,0.587043471179108,0.433099343283221,0,0.190254152234598,0,4.29243081047436,0.246217006087397,3.97807250736704,1.63494278517601,0,0.335964256397719,0,0.179117045405697,1.16253575405585,0.383382679165211,9.85326475791887,2.99364675644969,1.65862492432618,1.29707958075265,1.38866676769018,1.07946420296687,0,1.17217447210047,0,0.822619941626588,0,0,0.784917590417525,0.43596006883328,0.95339771567235,0.646358578788889,0,0.845302752556,0,0,0.514414748524284,0,0,0,0,0,0.65147236858747,0,0,0.904318131178758,1.74306691720059,0.099972991182057,2.43247561282381,2.51128545716063,0,2.15662369942424,1.14861935834114,0,0.434343920002738,0.205476322550383,1.61154866915906,0.448340575974109,4.53170748464433,3.45004119775228,2.69520376187472,3.30323011489202,1.30139853857622,0,0.167516265334349,0,5.99205619157746,0,10.7748033493369,0,0,0,0,0.535286966391485,0.315404830067869,0.35142424497814,1.20378439891088,0,1.03473071292505,0.664225598535437,0.921845842708516,0.695068915744663,0,0.686286847621712,5.16920065307218,5.60856922128404,2.56146138728266,0,0,0,0.744323423456331,1.07423381301644,0.280660094433074,1.28139149255701,1.53512174720011,0.321707842287215,0,0.925258162815933,1.24293207719189,0.410635780069046,0,1.04589340613963,0.604297247958111,0,0.0920809889358963,0.459257792658427,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0.509752546090077,0,0.223874754722178,1.31555925987561,0.522870902049801,0.256450125116389,0,0,0.515205058238611,0.0915694648183434,0,0.574265537996172,0,1.6068392984416,0.193341436584244,0.616194468458578,0.15350367472613,0,0.859361958946189,0.290033387828457,0.0852266274161009,1.4245125703478,0,0.768760269460425,1.78657797492418,0.30347334256665,0,0,0,0.924100740528266,0,0,0,0.2862497734839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| ||
|short_description=p4@GGNBP2 | |short_description=p4@GGNBP2 | ||
}} | }} |
Latest revision as of 17:07, 19 September 2015
Short description: | p4@GGNBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GGNBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENST00000486208_5end |
EntrezGene: | GGNBP2 |
HGNC: | 19357 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.44e-18 | 98 |
blood island | 1.44e-18 | 98 |
hemolymphoid system | 6.56e-17 | 108 |
bone marrow | 1.36e-13 | 76 |
bone element | 2.08e-12 | 82 |
immune system | 7.34e-11 | 93 |
skeletal element | 3.09e-10 | 90 |
blood | 4.09e-09 | 15 |
haemolymphatic fluid | 4.09e-09 | 15 |
organism substance | 4.09e-09 | 15 |
skeletal system | 4.49e-09 | 100 |
connective tissue | 9.74e-08 | 371 |