FFCP PHASE1:Hg19::chr17:34199262..34199274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:34199262..34199274,- | |||
|coexpression_cluster_id=C1776 | |||
|description=CAGE_peak_at_chr17:34199262..34199274,- | |description=CAGE_peak_at_chr17:34199262..34199274,- | ||
|id=chr17:34199262..34199274,- | |id=chr17:34199262..34199274,- | ||
|ontology_enrichment_celltype=CL:0002087!8.45e-28!119;CL:0000738!7.00e-27!140;CL:0000988!1.24e-25!182;CL:0000037!2.32e-25!172;CL:0000566!2.32e-25!172;CL:0002032!3.62e-24!165;CL:0000837!3.62e-24!165;CL:0002031!2.74e-23!124;CL:0000791!3.90e-17!18;CL:0000789!3.90e-17!18;CL:0002420!3.90e-17!18;CL:0002419!3.90e-17!18;CL:0000790!3.90e-17!18;CL:0000625!8.60e-17!11;CL:0002057!1.82e-15!42;CL:0000860!6.89e-14!45;CL:0002009!7.93e-14!65;CL:0002194!1.31e-13!63;CL:0000576!1.31e-13!63;CL:0000040!1.31e-13!63;CL:0000559!1.31e-13!63;CL:0000766!1.67e-13!76;CL:0000763!1.22e-12!112;CL:0000049!1.22e-12!112;CL:0000084!1.64e-12!25;CL:0000827!1.64e-12!25;CL:0000838!3.73e-12!52;CL:0000557!7.61e-12!71;CL:0000542!9.01e-12!53;CL:0000051!9.01e-12!53;CL:0000839!2.57e-11!70;CL:0000080!1.67e-08!6 | |ontology_enrichment_celltype=CL:0002087!8.45e-28!119;CL:0000738!7.00e-27!140;CL:0000988!1.24e-25!182;CL:0000037!2.32e-25!172;CL:0000566!2.32e-25!172;CL:0002032!3.62e-24!165;CL:0000837!3.62e-24!165;CL:0002031!2.74e-23!124;CL:0000791!3.90e-17!18;CL:0000789!3.90e-17!18;CL:0002420!3.90e-17!18;CL:0002419!3.90e-17!18;CL:0000790!3.90e-17!18;CL:0000625!8.60e-17!11;CL:0002057!1.82e-15!42;CL:0000860!6.89e-14!45;CL:0002009!7.93e-14!65;CL:0002194!1.31e-13!63;CL:0000576!1.31e-13!63;CL:0000040!1.31e-13!63;CL:0000559!1.31e-13!63;CL:0000766!1.67e-13!76;CL:0000763!1.22e-12!112;CL:0000049!1.22e-12!112;CL:0000084!1.64e-12!25;CL:0000827!1.64e-12!25;CL:0000838!3.73e-12!52;CL:0000557!7.61e-12!71;CL:0000542!9.01e-12!53;CL:0000051!9.01e-12!53;CL:0000839!2.57e-11!70;CL:0000080!1.67e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.37e-34;11!CL:0000791;1.70e-32;18!CL:0000789;1.70e-32;18!CL:0002419;1.70e-32;18!CL:0000084;2.20e-22;25!CL:0000860;1.17e-12;33!CL:0002057;1.17e-12;33!CL:0002087;3.67e-11;104!CL:0000473;1.40e-10;39!CL:0000234;1.40e-10;39!CL:0000623;1.66e-10;3!CL:0000226;2.86e-09;3!CL:0000842;2.86e-09;3!CL:0000542;2.01e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.49e-34,11;CL:0000791,1.73e-32,18;CL:0000789,1.73e-32,18;CL:0002420,1.73e-32,18;CL:0002419,1.73e-32,18;CL:0000790,1.73e-32,18;CL:0002087,8.13e-25,115;CL:0000738,5.69e-24,136;CL:0000084,2.22e-22,25;CL:0000827,2.22e-22,25;CL:0000988,3.55e-22,177;CL:0000037,2.49e-21,168;CL:0002031,5.73e-19,120;CL:0002032,8.40e-19,161;CL:0000837,8.40e-19,161;CL:0000838,7.44e-14,52;CL:0000542,1.64e-13,53;CL:0000051,1.64e-13,53;CL:0000860,8.91e-12,42;CL:0002057,8.91e-12,42;CL:0000473,2.19e-11,48;CL:0000234,2.19e-11,48;CL:0000623,1.69e-10,3;CL:0000825,1.69e-10,3;CL:0000766,1.44e-09,72;CL:0000226,1.88e-09,3;CL:0000842,1.88e-09,3;CL:0002194,2.08e-08,59;CL:0000576,2.08e-08,59;CL:0000040,2.08e-08,59;CL:0000559,2.08e-08,59;CL:0002009,5.00e-08,61;CL:0000763,1.96e-07,108;CL:0000049,1.96e-07,108;CL:0000839,3.52e-07,66;CL:0000893,4.15e-07,2;CL:0002489,4.15e-07,2;CL:0000809,4.15e-07,2;CL:0000808,4.15e-07,2;CL:0000894,4.15e-07,2;CL:0000806,4.15e-07,2;CL:0000807,4.15e-07,2;CL:0000805,4.15e-07,2;CL:0002425,4.15e-07,2;CL:0000557,5.02e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000790;1.70e-32;18!CL:0002057;2.77e-08;42!CL:0000051;2.01e-07;53!CL:0002425;3.78e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.35e-24!102;UBERON:0003061!8.35e-24!102;UBERON:0002193!3.36e-21!112;UBERON:0000178!2.21e-20!15;UBERON:0000179!2.21e-20!15;UBERON:0000463!2.21e-20!15;UBERON:0002371!2.62e-10!80;UBERON:0001474!6.03e-09!86;UBERON:0001737!3.93e-08!9;UBERON:0004765!2.15e-07!101;UBERON:0001434!2.15e-07!101;UBERON:0003081!2.46e-07!216;UBERON:0002405!4.23e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.59e-37;15!UBERON:0000179;5.59e-37;15!UBERON:0000463;5.59e-37;15!UBERON:0002390;4.51e-15;32!UBERON:0002193;6.94e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.57e-37,15;UBERON:0000179,3.57e-37,15;UBERON:0000463,3.57e-37,15;UBERON:0002390,2.53e-22,98;UBERON:0003061,2.53e-22,98;UBERON:0002193,1.57e-19,108;UBERON:0003081,2.82e-08,203 | |||
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|short_description=p@chr17:34199262..34199274,- | |short_description=p@chr17:34199262..34199274,- | ||
}} | }} |
Latest revision as of 15:42, 25 July 2015
Short description: | p@chr17:34199262..34199274, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:34199262..34199274, - |
Coexpression cluster: | C1776_embryonic_CD8_Natural_Whole_NK_blood_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 3.57e-37 | 15 |
haemolymphatic fluid | 3.57e-37 | 15 |
organism substance | 3.57e-37 | 15 |
hematopoietic system | 2.53e-22 | 98 |
blood island | 2.53e-22 | 98 |
hemolymphoid system | 1.57e-19 | 108 |
lateral plate mesoderm | 2.82e-08 | 203 |