FFCP PHASE1:Hg19::chr17:34037239..34037263,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:34037239..34037263,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr17:34037239..34037263,+ | |description=CAGE_peak_at_chr17:34037239..34037263,+ | ||
|id=chr17:34037239..34037263,+ | |id=chr17:34037239..34037263,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;3.08e-14;1!CL:0000164;3.08e-14;1!CL:0000502;3.08e-14;1!CL:0000172;3.08e-14;1!CL:0000173;3.08e-14;1!CL:0000333;4.12e-11;5!CL:0000047;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.08e-14,1;CL:0000164,3.08e-14,1;CL:0000502,3.08e-14,1;CL:0000172,3.08e-14,1;CL:0000173,3.08e-14,1;CL:0002351,3.08e-14,1 | |||
|ontology_enrichment_development_v019=CL:0002351;3.08e-14;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;1.03e-19;6!DOID:4430;3.08e-14;1!DOID:171;4.47e-12;10!DOID:154;1.09e-07;2!DOID:4236;1.09e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.72e-20,6;DOID:4430,3.08e-14,1;DOID:171,4.31e-12,10;DOID:154,1.05e-07,2;DOID:4236,1.05e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;1.33e-13;1!UBERON:0005352;1.33e-13;1!UBERON:0000013;4.12e-11;5!UBERON:0002410;4.12e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,8.58e-14,1;UBERON:0005352,8.58e-14,1;UBERON:0000013,3.92e-11,5;UBERON:0002410,3.92e-11,5 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541607727530031,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0.43917392846563,0.0654895377488563,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0,0.576175924479999,0.937285727335186,0,0,0.298897361103602,0.23486899728753,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.427114777637135,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0.71181185733329,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0.109750285408626,1.1240175325762,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0.502257091432126,0,0.479249710983165,2.29723871668228,0,0,0,0,0.336255431980582,0,0.215627574859517,0,0,1.30139853857622,0.773288812777695,0.335032530668698,0.637938751653163,0.749007023947182,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0,0.519254429183621,0.232420756919918,0.241718899183244,0.40101294060657,0.736647911487171,0,0,0.262248829918848,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.976135183992909,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0,0,0.330569830721956,0.576570202095319,0.255225424989168,0,0.929691098594572,0,0,0,0,0,0.55597265731176,0,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0,0,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.341380344856499,0,0.236387681767936,1.72371686620732,0.291604613383254,5.20874984799877,0,0.120596438625408,0,0,0,0.219385397153973,0.435753854075961,5.01925479402972,0.0769502585037971,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,1.97292201424695,0,0.61214552326098,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0.138674673013139,0.347119476670262,0,0.174118413160805,0,0,0,0.146178634172371,0.164230914106418,0,0.176512253383001,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0,0,0,0.72045208577053,0,0.514784993585894,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,2.46068703786872,0.0846733320657845,0.795229689809303,0,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0.164185041498678,0.340776043570843,0.113312091520126,0.58620893471233,0,0.129282956361551,0.13223260174269,0.684347351537318,0,0.213574825135389,0,0,0,0.197611631897944,0,1.27668251554036,0,0.2506898940227,0,0,0,0.886068179966986,0.732157589411779,0,0,0,0.0620964029413835,0.276697269872462,0,0,0,0.235265819698172,0,0.144921028610825,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,0.686520205190771,0,0,0.147855149989634,0,0,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0.463044948647668,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0.172214979660816,0,0,0.559518030877778,0,7.28997916430815,0.107824811396682,2.98805289526203,0,0.169732529954025,0,0.247871528518004,0,0.318004350653419,0,0,0,0.918736432059601,0,0,0,0.205116364240755,0.252071696221718,0,0.322951291263702,0,0.294443155503077,0,0,0.115525666150338,0,0,1.39241355481392,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0.548257766857182,0,0.703484977438482,0.127762427639595,0,0,0,0.227662191351298,0.177404740325278,0,0.171488009437418,0,0,0.236387681767936,0,0,0,0,0,0,0.47775168788705,0.214429632529969,0,0,0.521574816907738,0,0,0,0,0,0,0.0852134047591577,0.846774100381858,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0.397901550322736,0,0,0,1.96251696636676,0.0771741581079447,0,3.29222107453066,0,19.3254768623333,0.392616934229891,0,0,0,0,0,0,0.535661815816973,0,0.160482733378337,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.218531143927391,0.253397002022874,0.101988829741982,0.26721740526556,0,0,0.151557396436479,0.535928260312357,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0,0,0,0,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541607727530031,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0.43917392846563,0.0654895377488563,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0,0.576175924479999,0.937285727335186,0,0,0.298897361103602,0.23486899728753,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.427114777637135,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0.71181185733329,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0.109750285408626,1.1240175325762,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0.502257091432126,0,0.479249710983165,2.29723871668228,0,0,0,0,0.336255431980582,0,0.215627574859517,0,0,1.30139853857622,0.773288812777695,0.335032530668698,0.637938751653163,0.749007023947182,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0,0.519254429183621,0.232420756919918,0.241718899183244,0.40101294060657,0.736647911487171,0,0,0.262248829918848,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.976135183992909,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0,0,0.330569830721956,0.576570202095319,0.255225424989168,0,0.929691098594572,0,0,0,0,0,0.55597265731176,0,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0,0,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.341380344856499,0,0.236387681767936,1.72371686620732,0.291604613383254,5.20874984799877,0,0.120596438625408,0,0,0,0.219385397153973,0.435753854075961,5.01925479402972,0.0769502585037971,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,1.97292201424695,0,0.61214552326098,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0.138674673013139,0.347119476670262,0,0.174118413160805,0,0,0,0.146178634172371,0.164230914106418,0,0.176512253383001,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0,0,0,0.72045208577053,0,0.514784993585894,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,2.46068703786872,0.0846733320657845,0.795229689809303,0,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0.164185041498678,0.340776043570843,0.113312091520126,0.58620893471233,0,0.129282956361551,0.13223260174269,0.684347351537318,0,0.213574825135389,0,0,0,0.197611631897944,0,1.27668251554036,0,0.2506898940227,0,0,0,0.886068179966986,0.732157589411779,0,0,0,0.0620964029413835,0.276697269872462,0,0,0,0.235265819698172,0,0.144921028610825,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,0.686520205190771,0,0,0.147855149989634,0,0,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0.463044948647668,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0.172214979660816,0,0,0.559518030877778,0,7.28997916430815,0.107824811396682,2.98805289526203,0,0.169732529954025,0,0.247871528518004,0,0.318004350653419,0,0,0,0.918736432059601,0,0,0,0.205116364240755,0.252071696221718,0,0.322951291263702,0,0.294443155503077,0,0,0.115525666150338,0,0,1.39241355481392,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0.548257766857182,0,0.703484977438482,0.127762427639595,0,0,0,0.227662191351298,0.177404740325278,0,0.171488009437418,0,0,0.236387681767936,0,0,0,0,0,0,0.47775168788705,0.214429632529969,0,0,0.521574816907738,0,0,0,0,0,0,0.0852134047591577,0.846774100381858,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0.397901550322736,0,0,0,1.96251696636676,0.0771741581079447,0,3.29222107453066,0,19.3254768623333,0.392616934229891,0,0,0,0,0,0,0.535661815816973,0,0.160482733378337,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.218531143927391,0.253397002022874,0.101988829741982,0.26721740526556,0,0,0.151557396436479,0.535928260312357,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:34037239..34037263,+ | |short_description=p@chr17:34037239..34037263,+ | ||
}} | }} |
Latest revision as of 15:41, 25 July 2015
Short description: | p@chr17:34037239..34037263, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:34037239..34037263, + |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.08e-14 | 1 |
enteroendocrine cell | 3.08e-14 | 1 |
type D enteroendocrine cell | 3.08e-14 | 1 |
somatostatin secreting cell | 3.08e-14 | 1 |
pancreatic D cell | 3.08e-14 | 1 |
progenitor cell of endocrine pancreas | 3.08e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 8.58e-14 | 1 |
spermatic cord | 8.58e-14 | 1 |
sympathetic nervous system | 3.92e-11 | 5 |
autonomic nervous system | 3.92e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.72e-20 | 6 |
somatostatinoma | 3.08e-14 | 1 |
neuroectodermal tumor | 4.31e-12 | 10 |
mixed cell type cancer | 1.05e-07 | 2 |
carcinosarcoma | 1.05e-07 | 2 |