FFCP PHASE1:Hg19::chr10:75936300..75936322,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=132 | |EntrezGene=132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=257 | |HGNC=257 | ||
|TSSclassifier=strong | |||
|UniProt=P55263,Q5JQ10,B7Z800 | |UniProt=P55263,Q5JQ10,B7Z800 | ||
|association_with_transcript=53bp_to_NM_001123,NM_001202449_5end | |||
|cluster_id=chr10:75936300..75936322,+ | |||
|description=CAGE_peak_3_at_ADK_5end | |||
|id=chr10:75936300..75936322,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.36e-10!172;CL:0000566!2.36e-10!172;CL:0000738!1.88e-09!140;CL:0000838!2.91e-09!52;CL:0000542!4.65e-09!53;CL:0000051!4.65e-09!53;CL:0000988!1.00e-08!182;CL:0002032!1.69e-08!165;CL:0000837!1.69e-08!165;CL:0000791!3.92e-08!18;CL:0000789!3.92e-08!18;CL:0002420!3.92e-08!18;CL:0002419!3.92e-08!18;CL:0000790!3.92e-08!18;CL:0000236!8.40e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.64e-08;18!CL:0000789;3.64e-08;18!CL:0002419;3.64e-08;18!CL:0000236;1.06e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.06e-11,168;CL:0000738,3.77e-10,136;CL:0000988,1.34e-09,177;CL:0000838,2.95e-09,52;CL:0002032,4.28e-09,161;CL:0000837,4.28e-09,161;CL:0000542,4.71e-09,53;CL:0000051,4.71e-09,53;CL:0000791,3.80e-08,18;CL:0000789,3.80e-08,18;CL:0002420,3.80e-08,18;CL:0002419,3.80e-08,18;CL:0000790,3.80e-08,18;CL:0000236,8.16e-08,14;CL:0002031,9.97e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.64e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.04e-21!115;UBERON:0001049!7.59e-12!57;UBERON:0005068!7.59e-12!57;UBERON:0006241!7.59e-12!57;UBERON:0007135!7.59e-12!57;UBERON:0001017!2.74e-10!82;UBERON:0000073!3.09e-10!94;UBERON:0001016!3.09e-10!94;UBERON:0002780!3.33e-10!41;UBERON:0001890!3.33e-10!41;UBERON:0006240!3.33e-10!41;UBERON:0003080!4.43e-10!42;UBERON:0002616!5.03e-10!59;UBERON:0005743!1.78e-09!86;UBERON:0000955!6.56e-09!69;UBERON:0006238!6.56e-09!69;UBERON:0001893!4.40e-08!34;UBERON:0001869!8.71e-08!32;UBERON:0002791!9.53e-08!33;UBERON:0002020!1.01e-07!34;UBERON:0003528!1.01e-07!34;UBERON:0002346!2.82e-07!90;UBERON:0003075!3.60e-07!86;UBERON:0007284!3.60e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.36e-07;41!UBERON:0001890;1.36e-07;41!UBERON:0007023;3.56e-07;114!UBERON:0001869;3.79e-07;32!UBERON:0002791;5.34e-07;32!UBERON:0001893;5.45e-07;34!UBERON:0003528;9.37e-07;34!UBERON:0002020;9.37e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-20,114;UBERON:0001049,5.70e-12,56;UBERON:0005068,5.70e-12,56;UBERON:0006241,5.70e-12,56;UBERON:0007135,5.70e-12,56;UBERON:0001016,5.75e-11,89;UBERON:0000073,6.47e-11,53;UBERON:0002616,6.47e-11,53;UBERON:0002780,3.19e-10,41;UBERON:0001890,3.19e-10,41;UBERON:0003080,3.19e-10,41;UBERON:0006240,3.19e-10,41;UBERON:0001017,3.23e-10,81;UBERON:0000955,7.73e-09,68;UBERON:0006238,7.73e-09,68;UBERON:0001893,4.26e-08,34;UBERON:0001869,8.46e-08,32;UBERON:0003528,9.77e-08,34;UBERON:0002020,9.77e-08,34;UBERON:0002791,1.44e-07,32;UBERON:0002346,1.46e-07,86;UBERON:0003075,1.84e-07,82;UBERON:0007284,1.84e-07,82 | |||
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| ||
|short_description=p3@ADK | |||
}} | }} |
Latest revision as of 08:33, 19 September 2015
Short description: | p3@ADK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADK_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_NM_001123, NM_001202449_5end |
EntrezGene: | ADK |
HGNC: | 257 |
UniProt: | P55263Q5JQ10B7Z800 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.06e-11 | 168 |
leukocyte | 3.77e-10 | 136 |
hematopoietic cell | 1.34e-09 | 177 |
lymphoid lineage restricted progenitor cell | 2.95e-09 | 52 |
hematopoietic oligopotent progenitor cell | 4.28e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.28e-09 | 161 |
lymphocyte | 4.71e-09 | 53 |
common lymphoid progenitor | 4.71e-09 | 53 |
mature alpha-beta T cell | 3.80e-08 | 18 |
alpha-beta T cell | 3.80e-08 | 18 |
immature T cell | 3.80e-08 | 18 |
mature T cell | 3.80e-08 | 18 |
immature alpha-beta T cell | 3.80e-08 | 18 |
B cell | 8.16e-08 | 14 |
hematopoietic lineage restricted progenitor cell | 9.97e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-20 | 114 |
neural tube | 5.70e-12 | 56 |
neural rod | 5.70e-12 | 56 |
future spinal cord | 5.70e-12 | 56 |
neural keel | 5.70e-12 | 56 |
nervous system | 5.75e-11 | 89 |
regional part of nervous system | 6.47e-11 | 53 |
regional part of brain | 6.47e-11 | 53 |
regional part of forebrain | 3.19e-10 | 41 |
forebrain | 3.19e-10 | 41 |
anterior neural tube | 3.19e-10 | 41 |
future forebrain | 3.19e-10 | 41 |
central nervous system | 3.23e-10 | 81 |
brain | 7.73e-09 | 68 |
future brain | 7.73e-09 | 68 |
telencephalon | 4.26e-08 | 34 |
cerebral hemisphere | 8.46e-08 | 32 |
brain grey matter | 9.77e-08 | 34 |
gray matter | 9.77e-08 | 34 |
regional part of telencephalon | 1.44e-07 | 32 |
neurectoderm | 1.46e-07 | 86 |
neural plate | 1.84e-07 | 82 |
presumptive neural plate | 1.84e-07 | 82 |