FFCP PHASE1:Hg19::chr21:16374688..16374703,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8204 | |EntrezGene=8204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8001 | |HGNC=8001 | ||
|TSSclassifier=strong | |||
|UniProt=C9J130 | |UniProt=C9J130 | ||
|association_with_transcript=0bp_to_ENST00000411932_5end | |association_with_transcript=0bp_to_ENST00000411932_5end | ||
|cluster_id=chr21:16374688..16374703,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_6_at_NRIP1_5end | |description=CAGE_peak_6_at_NRIP1_5end | ||
|id=chr21:16374688..16374703,- | |id=chr21:16374688..16374703,- | ||
|ontology_enrichment_celltype=CL:0000064!7.39e-14!3;CL:0005012!7.39e-14!3;CL:0000067!7.39e-14!3;CL:0002304!7.39e-14!3 | |ontology_enrichment_celltype=CL:0000064!7.39e-14!3;CL:0005012!7.39e-14!3;CL:0000067!7.39e-14!3;CL:0002304!7.39e-14!3 | ||
|ontology_enrichment_celltype_v019=CL:0000342;2.73e-29;1!CL:0002565;2.73e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,2.37e-29,1;CL:0002565,2.37e-29,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.04e-10;3 | |||
|ontology_enrichment_disease=DOID:1115!5.05e-07!20 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!8.38e-24!11;UBERON:0000970!8.94e-24!20;UBERON:0002104!1.57e-22!21;UBERON:0000019!1.38e-20!19;UBERON:0000047!1.38e-20!19;UBERON:0004088!1.38e-20!19;UBERON:0003072!1.38e-20!19;UBERON:0003071!1.38e-20!19;UBERON:0004128!1.38e-20!19;UBERON:0000020!2.29e-20!23;UBERON:0001032!2.03e-19!24;UBERON:0004456!2.03e-19!24;UBERON:0001456!1.96e-18!21;UBERON:0000488!4.99e-18!4;UBERON:0003075!5.82e-18!86;UBERON:0007284!5.82e-18!86;UBERON:0002346!6.13e-17!90;UBERON:0003056!1.21e-15!61;UBERON:0000153!6.33e-14!129;UBERON:0007811!6.33e-14!129;UBERON:0001778!7.39e-14!3;UBERON:0001775!7.39e-14!3;UBERON:0000966!1.14e-13!5;UBERON:0005388!1.14e-13!5;UBERON:0001802!1.14e-13!5;UBERON:0000033!1.49e-13!123;UBERON:0005085!8.48e-13!29;UBERON:0002203!4.85e-12!6;UBERON:0001768!4.85e-12!6;UBERON:0003296!9.40e-11!4;UBERON:0010133!9.40e-11!4;UBERON:0001801!1.35e-10!14;UBERON:0001444!2.80e-10!48;UBERON:0001905!3.21e-10!2;UBERON:0002757!3.21e-10!2;UBERON:0010134!3.21e-10!2;UBERON:0002784!3.21e-10!2;UBERON:0005408!3.21e-10!2;UBERON:0001899!3.21e-10!2;UBERON:0005743!1.23e-09!86;UBERON:0004121!2.79e-09!169;UBERON:0000924!6.08e-09!173;UBERON:0006601!6.08e-09!173;UBERON:0000073!2.14e-08!94;UBERON:0001016!2.14e-08!94;UBERON:0001049!9.06e-08!57;UBERON:0005068!9.06e-08!57;UBERON:0006241!9.06e-08!57;UBERON:0007135!9.06e-08!57;UBERON:0000063!2.61e-07!97;UBERON:0000955!5.02e-07!69;UBERON:0006238!5.02e-07!69;UBERON:0000483!6.42e-07!309;UBERON:0000119!8.74e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0002506;2.73e-29;1!UBERON:0001769;2.73e-29;1!UBERON:0001894;2.46e-17;7!UBERON:0000488;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-57,2;UBERON:0002757,1.13e-57,2;UBERON:0010134,1.13e-57,2;UBERON:0005408,1.13e-57,2;UBERON:0001899,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0002784,1.78e-29,4;UBERON:0002506,2.37e-29,1;UBERON:0001769,2.37e-29,1;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0000488,2.26e-08,4 | |||
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| ||
|short_description=p6@NRIP1 | |short_description=p6@NRIP1 | ||
}} | }} |
Latest revision as of 18:57, 17 September 2015
Short description: | p6@NRIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NRIP1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000411932_5end |
EntrezGene: | NRIP1 |
HGNC: | 8001 |
UniProt: | C9J130 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 2.37e-29 | 1 |
iris pigment epithelial cell | 2.37e-29 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
iris epithelium | 2.37e-29 | 1 |
iris | 2.37e-29 | 1 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
atypical epithelium | 2.26e-08 | 4 |