FFCP PHASE1:Hg19::chr10:33623826..33623835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8829 | |EntrezGene=8829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8004 | |HGNC=8004 | ||
|TSSclassifier=strong | |||
|UniProt=O14786,Q68DN3,Q96I90,Q59F20,Q6AWA9,Q5T7F1 | |UniProt=O14786,Q68DN3,Q96I90,Q59F20,Q6AWA9,Q5T7F1 | ||
|association_with_transcript=0bp_to_ENST00000374867,NM_001024628,NM_001024629,NM_001244972,NM_001244973,NM_003873,NR_045259,uc001iwx.3,uc001iwy.3,uc001iwz.2,uc001ixa.2_5end | |||
|cluster_id=chr10:33623826..33623835,- | |||
|coexpression_cluster_id=C2059 | |||
|description=CAGE_peak_9_at_NRP1_5end | |||
|id=chr10:33623826..33623835,- | |||
|ontology_enrichment_celltype=CL:0000055!3.58e-21!180;CL:0000222!9.40e-17!119;CL:0000057!1.79e-14!75;CL:0000680!5.96e-13!57;CL:0000056!5.96e-13!57;CL:0000355!5.96e-13!57;CL:0000183!6.24e-13!59;CL:0000187!1.19e-12!54;CL:0000393!6.76e-11!60;CL:0000211!6.76e-11!60;CL:0000220!2.31e-10!246;CL:0002321!4.50e-10!248;CL:0000192!2.27e-08!42;CL:0000514!2.27e-08!42;CL:0000359!1.84e-07!32;CL:0002620!3.38e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000187;7.22e-08;55!CL:0000359;9.93e-08;32!CL:0002620;1.84e-07;23!CL:0000393;9.92e-07;61!CL:0000211;9.92e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.69e-17,121;CL:0000057,6.35e-16,76;CL:0000680,4.29e-14,58;CL:0000056,4.29e-14,58;CL:0000355,4.29e-14,58;CL:0000187,9.78e-14,55;CL:0000393,3.88e-12,61;CL:0000211,3.88e-12,61;CL:0000192,6.80e-09,43;CL:0000514,6.80e-09,43;CL:0002321,1.05e-08,250;CL:0000359,2.10e-08,32;CL:0002620,1.40e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000355;7.51e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.23e-14!143;UBERON:0000914!2.06e-14!83;UBERON:0002329!2.06e-14!83;UBERON:0003077!2.06e-14!83;UBERON:0003059!2.06e-14!83;UBERON:0007282!2.06e-14!83;UBERON:0009618!2.06e-14!83;UBERON:0007285!2.06e-14!83;UBERON:0002100!5.90e-14!216;UBERON:0002049!7.17e-14!79;UBERON:0007798!7.17e-14!79;UBERON:0000468!1.20e-13!659;UBERON:0004290!3.18e-13!70;UBERON:0004872!7.34e-13!84;UBERON:0000486!7.50e-13!82;UBERON:0000475!1.42e-12!365;UBERON:0001134!6.29e-12!61;UBERON:0002036!6.29e-12!61;UBERON:0003082!6.29e-12!61;UBERON:0002385!1.33e-11!63;UBERON:0001015!1.33e-11!63;UBERON:0000383!1.33e-11!63;UBERON:0003914!1.57e-11!118;UBERON:0000490!1.87e-11!138;UBERON:0001009!2.83e-11!113;UBERON:0004535!1.03e-10!110;UBERON:0000055!1.17e-10!69;UBERON:0000119!1.97e-10!312;UBERON:0000467!2.49e-10!625;UBERON:0000480!4.26e-10!626;UBERON:0000483!7.12e-10!309;UBERON:0001981!7.79e-10!60;UBERON:0007500!7.79e-10!60;UBERON:0004537!7.79e-10!60;UBERON:0006965!7.79e-10!60;UBERON:0001637!1.10e-09!42;UBERON:0003509!1.10e-09!42;UBERON:0004572!1.10e-09!42;UBERON:0004573!4.47e-09!33;UBERON:0004571!4.47e-09!33;UBERON:0003102!1.10e-08!95;UBERON:0003104!1.10e-08!238;UBERON:0009142!1.10e-08!238;UBERON:0000481!2.59e-08!347;UBERON:0000477!5.52e-08!286;UBERON:0000947!8.39e-08!21;UBERON:0010191!8.39e-08!21;UBERON:0002199!2.86e-07!45;UBERON:0002416!2.86e-07!45;UBERON:0000926!3.15e-07!448;UBERON:0004120!3.15e-07!448;UBERON:0006603!3.15e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.37e-09;33!UBERON:0004571;1.37e-09;33!UBERON:0001637;5.63e-09;42!UBERON:0003509;5.63e-09;42!UBERON:0004572;5.63e-09;42!UBERON:0000947;1.31e-08;21!UBERON:0010191;1.31e-08;21!UBERON:0000055;9.57e-07;65!UBERON:0002049;9.64e-07;75!UBERON:0007798;9.64e-07;75 | |||
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|phase1_expression=2.18014055124668,0.856402095563933,2.81908808191942,0,1.34088328328186,0,2.53299878168311,0.631719873426831,2.35067065379855,1.96587149201207,0,0,0.263766978228454,4.45558870656168,1.98838425436749,4.03395087871065,2.41077811209591,5.11217063271161,2.92759679274304,2.21617904538218,0.408001382488506,0.626909442956176,0.286235987131057,1.09499540058307,0.251085279189606,0.305653622991805,0.821005894499457,0.550975469195755,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0.200544447470142,0,1.79132379391939,0.647787332037959,1.54545340580512,1.01778767145695,2.26725566213286,0,0,0,0.309706370895104,0.575384784644301,0.256160706529101,0,0.689491361473237,0,0,0.752969358170419,0.545812300115692,0,0.306083892370903,0,0,0.659702600373432,0.598390972864896,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.68280343881454,1.66221330396589,1.0843174571537,1.00267582127178,0.869079113764942,0.795285947051099,0,2.9305793320861,2.4390233720882,2.45937399940753,1.76821751921912,0.364295288292542,0.741568885568859,0,0.696518949197069,0.132957960518865,5.96226560763355,6.86393892936153,1.48583000531826,2.98143611050058,2.58070378531837,6.59566953054429,3.39184765154406,3.77549492588915,2.47606237746061,1.04497483268405,5.42675194255591,7.1153252537342,4.01664735317604,0.805658634218294,0,0.488124115096339,1.83831540172934,2.43042584364528,4.19708722935175,4.04152870727106,5.85579698513276,0,1.89853131913626,2.74802615895611,0,0,0,1.98788780678127,2.78587125662075,6.3556406790345,5.73673241497627,3.54668382198357,1.12135520028461,1.06748995729705,1.97334038733728,4.04574346019696,1.88594940897563,1.9615428373615,1.21085942115945,2.88087962239999,3.51482147750695,4.37024107562449,1.1409436430889,2.39117888882882,2.23125547423153,2.91371299862637,3.08991774744947,4.89970011011744,2.33385202892359,2.16984140469107,1.18800285728205,6.18167323196392,0,2.15585442544872,2.69337782326506,3.25308151667107,3.87889761677856,3.07284334616587,0.612975591598039,4.35690370829131,1.13432183160021,2.15267562826634,4.48470516518992,3.60284231971255,4.50136644126603,1.95799805553034,1.03056216018252,3.16398655763703,6.58227695740938,1.85130309806277,2.52433774244115,5.15479432396876,1.93975268182574,2.4850671476163,1.5112814734146,2.7129694769678,2.12586938479627,1.63647672354501,0.860413786167011,0.243947412259191,0.132529768321485,0.348581828608555,0.518305275076852,0.504641701751257,0,3.12899064659632,1.92972281457866,0,4.17931135228781,1.44375896333917,0,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0.738155454624648,1.40241773803446,1.6462960453256,0,0,1.96565443335525,2.36315962672562,0,0.368965315629341,2.23038153388083,1.97550513735526,0,0.603173834469785,0.185176890317059,1.3032332212413,5.19967392639789,2.88662684050547,1.15930404975077,3.87448690978212,0.866198686566443,4.62985512576611,1.90254152234598,0,1.71697232418975,0.492434012174795,1.17002132569619,1.0404181360211,0,0.503946384596579,0.708875486211932,3.58234090811393,4.06887513919547,1.91691339582606,0.492663237895943,5.81119664487292,0.207328115540772,0.288239906833923,0.75745460055828,0.190493682876507,0,0,0,0.102827492703324,0,0,3.1396703616701,1.74384027533312,3.15354629030085,3.87815147273333,0,4.22651376278,3.72313363218819,1.04007436911366,3.85811061393213,4.25547396069835,2.39779961114489,1.57275793023962,3.7983512377401,1.64648067356154,3.58309802723109,0,3.16780749173372,1.80863626235752,1.74306691720059,0.199945982364114,1.2162378064119,1.50677127429638,2.10833939483032,0.479249710983165,1.14861935834114,15.690059554479,1.44781306667579,1.64381058040307,2.32779252211864,0,0,0,0,0.254094624222463,0,1.54657762555539,0.502548796003046,5.10351001322531,0,0,0,5.39842563564216,5.50187573165645,3.25518028439683,11.4383973841944,8.20773348466944,7.09660867652706,7.02848489956279,0.902838299183157,0,2.0694614258501,3.98535359121262,1.29058417979192,3.21469373531907,1.76221041716467,1.37257369524342,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,2.48107807818777,3.06923946576125,3.36792113319688,3.84417447767103,1.53512174720011,0.965123526861645,0,4.00945203886904,2.30830242907065,4.59912073677331,7.2695620085707,2.67283870457906,0.483437798366489,2.00506470303285,1.47329582297434,2.18147451512753,2.91345868810747,2.62248829918848,0.902399225814824,1.61732207919271,0.784349769176855,1.46139224653261,2.63879072232189,1.13733384070897,1.19065593693561,5.61381381865562,1.54227252690289,3.25135725052623,1.00337954770971,2.03901018436031,0,1.56712328305525,0,0,0.256450125116389,0.984043937099117,0,1.13345112812495,1.00726411300178,0.660075999364704,0,1.30012049207304,4.82051789532479,7.25030387190915,1.69453478826109,3.22357716924872,2.75673144969061,4.94133126394059,2.46528379654188,3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| ||
|short_description=p9@NRP1 | |||
}} | }} |
Latest revision as of 01:04, 18 September 2015
Short description: | p9@NRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NRP1_5end |
Coexpression cluster: | C2059_Myoblast_prostate_tridermal_mucinous_myxofibrosarcoma_mesenchymal_osteosarcoma |
Association with transcript: | 0bp_to_ENST00000374867, NM_001024628, NM_001024629, NM_001244972, NM_001244973, NM_003873, NR_045259, uc001iwx.3, uc001iwy.3, uc001iwz.2, uc001ixa.2_5end |
EntrezGene: | NRP1 |
HGNC: | 8004 |
UniProt: | O14786Q68DN3Q96I90Q59F20Q6AWA9Q5T7F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.69e-17 | 121 |
fibroblast | 6.35e-16 | 76 |
muscle precursor cell | 4.29e-14 | 58 |
myoblast | 4.29e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.29e-14 | 58 |
muscle cell | 9.78e-14 | 55 |
electrically responsive cell | 3.88e-12 | 61 |
electrically active cell | 3.88e-12 | 61 |
smooth muscle cell | 6.80e-09 | 43 |
smooth muscle myoblast | 6.80e-09 | 43 |
embryonic cell | 1.05e-08 | 250 |
vascular associated smooth muscle cell | 2.10e-08 | 32 |
skin fibroblast | 1.40e-07 | 23 |