FFCP PHASE1:Hg19::chr17:26368734..26368794,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51701 | |EntrezGene=51701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29858 | |HGNC=29858 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBE8 | |UniProt=Q9UBE8 | ||
|association_with_transcript=-387bp_to_ENST00000407008_5end | |association_with_transcript=-387bp_to_ENST00000407008_5end | ||
|cluster_id=chr17:26368734..26368794,+ | |||
|description=CAGE_peak_1_at_NLK_5end | |description=CAGE_peak_1_at_NLK_5end | ||
|id=chr17:26368734..26368794,+ | |id=chr17:26368734..26368794,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!8.65e-16!41;UBERON:0001890!8.65e-16!41;UBERON:0006240!8.65e-16!41;UBERON:0003080!7.21e-15!42;UBERON:0001893!6.23e-14!34;UBERON:0001869!1.15e-13!32;UBERON:0002791!2.34e-13!33;UBERON:0002020!1.77e-12!34;UBERON:0003528!1.77e-12!34;UBERON:0000073!1.77e-12!94;UBERON:0001016!1.77e-12!94;UBERON:0000955!1.80e-12!69;UBERON:0006238!1.80e-12!69;UBERON:0001017!1.99e-12!82;UBERON:0002619!2.48e-12!22;UBERON:0000956!2.86e-12!25;UBERON:0000203!2.86e-12!25;UBERON:0001950!9.64e-12!20;UBERON:0005743!3.13e-11!86;UBERON:0001049!1.45e-10!57;UBERON:0005068!1.45e-10!57;UBERON:0006241!1.45e-10!57;UBERON:0007135!1.45e-10!57;UBERON:0002616!2.11e-10!59;UBERON:0007023!4.12e-10!115;UBERON:0003056!1.13e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.81e-12;22!UBERON:0001869;2.10e-12;32!UBERON:0001893;2.15e-12;34!UBERON:0000956;2.44e-12;25!UBERON:0000203;2.44e-12;25!UBERON:0001950;6.74e-12;20!UBERON:0002791;9.73e-12;32!UBERON:0003528;3.58e-11;34!UBERON:0002020;3.58e-11;34!UBERON:0002780;4.95e-11;41!UBERON:0001890;4.95e-11;41!UBERON:0000073;6.72e-07;53!UBERON:0002616;6.72e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,8.65e-16,41;UBERON:0001890,8.65e-16,41;UBERON:0003080,8.65e-16,41;UBERON:0006240,8.65e-16,41;UBERON:0001016,3.28e-14,89;UBERON:0001893,6.23e-14,34;UBERON:0001869,1.15e-13,32;UBERON:0000955,4.69e-13,68;UBERON:0006238,4.69e-13,68;UBERON:0002791,5.40e-13,32;UBERON:0001017,5.95e-13,81;UBERON:0003528,1.77e-12,34;UBERON:0002020,1.77e-12,34;UBERON:0002619,2.48e-12,22;UBERON:0000956,2.86e-12,25;UBERON:0000203,2.86e-12,25;UBERON:0001950,9.64e-12,20;UBERON:0000073,2.63e-11,53;UBERON:0002616,2.63e-11,53;UBERON:0001049,3.71e-11,56;UBERON:0005068,3.71e-11,56;UBERON:0006241,3.71e-11,56;UBERON:0007135,3.71e-11,56;UBERON:0007023,9.43e-10,114;UBERON:0003056,1.24e-09,61;UBERON:0003075,3.23e-07,82;UBERON:0007284,3.23e-07,82 | |||
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| ||
|short_description=p1@NLK | |short_description=p1@NLK | ||
}} | }} |
Latest revision as of 04:27, 19 September 2015
Short description: | p1@NLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NLK_5end |
Coexpression cluster: | NA |
Association with transcript: | -387bp_to_ENST00000407008_5end |
EntrezGene: | NLK |
HGNC: | 29858 |
UniProt: | Q9UBE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 8.65e-16 | 41 |
forebrain | 8.65e-16 | 41 |
anterior neural tube | 8.65e-16 | 41 |
future forebrain | 8.65e-16 | 41 |
nervous system | 3.28e-14 | 89 |
telencephalon | 6.23e-14 | 34 |
cerebral hemisphere | 1.15e-13 | 32 |
brain | 4.69e-13 | 68 |
future brain | 4.69e-13 | 68 |
regional part of telencephalon | 5.40e-13 | 32 |
central nervous system | 5.95e-13 | 81 |
brain grey matter | 1.77e-12 | 34 |
gray matter | 1.77e-12 | 34 |
regional part of cerebral cortex | 2.48e-12 | 22 |
cerebral cortex | 2.86e-12 | 25 |
pallium | 2.86e-12 | 25 |
neocortex | 9.64e-12 | 20 |
regional part of nervous system | 2.63e-11 | 53 |
regional part of brain | 2.63e-11 | 53 |
neural tube | 3.71e-11 | 56 |
neural rod | 3.71e-11 | 56 |
future spinal cord | 3.71e-11 | 56 |
neural keel | 3.71e-11 | 56 |
adult organism | 9.43e-10 | 114 |
pre-chordal neural plate | 1.24e-09 | 61 |
neural plate | 3.23e-07 | 82 |
presumptive neural plate | 3.23e-07 | 82 |