FFCP PHASE1:Hg19::chr20:61464221..61464233,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1299 | |EntrezGene=1299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2219 | |HGNC=2219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000462700_5end | |association_with_transcript=-5bp_to_ENST00000462700_5end | ||
|cluster_id=chr20:61464221..61464233,+ | |||
|coexpression_cluster_id=C183 | |||
|description=CAGE_peak_8_at_COL9A3_5end | |description=CAGE_peak_8_at_COL9A3_5end | ||
|id=chr20:61464221..61464233,+ | |id=chr20:61464221..61464233,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.00e-22!24;CL:0000826!2.00e-22!24;CL:0000236!4.29e-22!14;CL:0000039!3.12e-17!7;CL:0000586!3.12e-17!7;CL:0000542!1.80e-10!53;CL:0000051!1.80e-10!53;CL:0000037!7.23e-10!172;CL:0000566!7.23e-10!172;CL:0000838!2.35e-09!52;CL:0002032!4.52e-09!165;CL:0000837!4.52e-09!165;CL:0002150!4.84e-09!3;CL:0000861!4.84e-09!3;CL:0000988!7.63e-09!182;CL:0002087!9.17e-09!119;CL:0000738!6.17e-08!140 | |ontology_enrichment_celltype=CL:0000945!2.00e-22!24;CL:0000826!2.00e-22!24;CL:0000236!4.29e-22!14;CL:0000039!3.12e-17!7;CL:0000586!3.12e-17!7;CL:0000542!1.80e-10!53;CL:0000051!1.80e-10!53;CL:0000037!7.23e-10!172;CL:0000566!7.23e-10!172;CL:0000838!2.35e-09!52;CL:0002032!4.52e-09!165;CL:0000837!4.52e-09!165;CL:0002150!4.84e-09!3;CL:0000861!4.84e-09!3;CL:0000988!7.63e-09!182;CL:0002087!9.17e-09!119;CL:0000738!6.17e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000236;6.15e-62;13!CL:0000945;1.52e-43;24!CL:0000817;2.66e-18;1!CL:0000785;4.08e-18;1!CL:0000819;4.08e-18;1!CL:0000542;6.55e-18;53!CL:0000039;2.35e-10;7!CL:0000586;2.35e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.46e-57,14;CL:0000945,1.28e-43,24;CL:0000826,1.28e-43,24;CL:0000817,1.88e-23,3;CL:0000838,6.37e-20,52;CL:0000542,1.54e-19,53;CL:0000051,1.54e-19,53;CL:0000819,3.75e-18,1;CL:0000039,2.04e-10,7;CL:0000586,2.04e-10,7;CL:0000785,9.46e-10,2;CL:0000955,9.46e-10,2;CL:0000818,9.46e-10,2;CL:0000954,9.46e-10,2;CL:0000816,9.46e-10,2;CL:0002087,1.28e-08,115;CL:0002031,3.10e-08,120;CL:0000738,3.39e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;6.55e-18;53!CL:0000954;9.87e-10;2!UBERON:0009117;1.62e-07;10!UBERON:0005564;1.62e-07;10 | |||
|ontology_enrichment_disease=DOID:2531!1.39e-11!51;DOID:0060083!1.39e-11!51;DOID:1240!5.26e-08!39;DOID:162!9.32e-08!235;DOID:3095!1.32e-07!22;DOID:2994!1.32e-07!22;DOID:14566!2.13e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0060073;4.08e-18;1!DOID:8675;4.08e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.75e-18,1;DOID:8675,3.75e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!4.64e-07!3;UBERON:0004854!4.64e-07!3;UBERON:0009034!4.64e-07!3;UBERON:0002095!4.64e-07!3;UBERON:0004782!4.64e-07!3;UBERON:0003281!4.64e-07!3;UBERON:0009664!4.64e-07!3;UBERON:0002296!4.64e-07!3;UBERON:0005602!4.64e-07!3;UBERON:0001179!4.64e-07!3;UBERON:0006293!4.64e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.55e-09;8!UBERON:0003135;6.54e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.14e-09,8;UBERON:0003135,5.98e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,2.18455444504853,0.889509253863555,0.426730222566507,1.20118796110804,1.72425731986345,1.32208974556972,3.81621501814146,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0.743212700502875,13.7055752327623,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0.425846237690326,0.343505344755765,0.307240764308458,0.447352215784832,0.500547425135725,0.586164286206121,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,1.47701766553283,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0.718061155278177,0.108647371922008,0,0,0,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,2.73682183823499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.677294319023596,1.16942907337897,0.821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0,1.93778776509765,0.26721740526556,0.36757959813938,1.25353769646188,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336760265072938,0,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,2.18455444504853,0.889509253863555,0.426730222566507,1.20118796110804,1.72425731986345,1.32208974556972,3.81621501814146,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0.743212700502875,13.7055752327623,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0.425846237690326,0.343505344755765,0.307240764308458,0.447352215784832,0.500547425135725,0.586164286206121,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,1.47701766553283,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0.718061155278177,0.108647371922008,0,0,0,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,2.73682183823499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.677294319023596,1.16942907337897,0.821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0,1.93778776509765,0.26721740526556,0.36757959813938,1.25353769646188,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336760265072938,0,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p8@COL9A3 | |short_description=p8@COL9A3 | ||
}} | }} |
Latest revision as of 11:40, 17 September 2015
Short description: | p8@COL9A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_COL9A3_5end |
Coexpression cluster: | C183_acute_non_CD34_diffuse_CD133_myeloma_Burkitt |
Association with transcript: | -5bp_to_ENST00000462700_5end |
EntrezGene: | COL9A3 |
HGNC: | 2219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.46e-57 | 14 |
lymphocyte of B lineage | 1.28e-43 | 24 |
pro-B cell | 1.28e-43 | 24 |
precursor B cell | 1.88e-23 | 3 |
lymphoid lineage restricted progenitor cell | 6.37e-20 | 52 |
lymphocyte | 1.54e-19 | 53 |
common lymphoid progenitor | 1.54e-19 | 53 |
B-1 B cell | 3.75e-18 | 1 |
germ line cell | 2.04e-10 | 7 |
germ cell | 2.04e-10 | 7 |
mature B cell | 9.46e-10 | 2 |
pre-B-II cell | 9.46e-10 | 2 |
transitional stage B cell | 9.46e-10 | 2 |
small pre-B-II cell | 9.46e-10 | 2 |
immature B cell | 9.46e-10 | 2 |
nongranular leukocyte | 1.28e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.10e-08 | 120 |
leukocyte | 3.39e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
testis | 3.14e-09 | 8 |
male reproductive organ | 5.98e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.75e-18 | 1 |
lymphosarcoma | 3.75e-18 | 1 |