FFCP PHASE1:Hg19::chr20:49411543..49411635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55653 | |EntrezGene=55653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14367 | |HGNC=14367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000445038,ENST00000463943_5end | |association_with_transcript=0bp_to_ENST00000445038,ENST00000463943_5end | ||
|cluster_id=chr20:49411543..49411635,+ | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_1_at_BCAS4_5end | |description=CAGE_peak_1_at_BCAS4_5end | ||
|id=chr20:49411543..49411635,+ | |id=chr20:49411543..49411635,+ | ||
|ontology_enrichment_celltype=CL:0000192!5.26e-13!42;CL:0000514!5.26e-13!42;CL:0000542!5.67e-12!53;CL:0000051!5.67e-12!53;CL:0000945!8.21e-12!24;CL:0000826!8.21e-12!24;CL:0000055!1.54e-11!180;CL:0000838!1.64e-11!52;CL:0000183!2.02e-11!59;CL:0000359!4.91e-11!32;CL:0000187!1.88e-10!54;CL:0000393!2.90e-10!60;CL:0000211!2.90e-10!60;CL:0000680!4.60e-10!57;CL:0000056!4.60e-10!57;CL:0000355!4.60e-10!57;CL:0000236!7.46e-10!14;CL:0002321!3.98e-09!248;CL:0000220!1.10e-08!246 | |ontology_enrichment_celltype=CL:0000192!5.26e-13!42;CL:0000514!5.26e-13!42;CL:0000542!5.67e-12!53;CL:0000051!5.67e-12!53;CL:0000945!8.21e-12!24;CL:0000826!8.21e-12!24;CL:0000055!1.54e-11!180;CL:0000838!1.64e-11!52;CL:0000183!2.02e-11!59;CL:0000359!4.91e-11!32;CL:0000187!1.88e-10!54;CL:0000393!2.90e-10!60;CL:0000211!2.90e-10!60;CL:0000680!4.60e-10!57;CL:0000056!4.60e-10!57;CL:0000355!4.60e-10!57;CL:0000236!7.46e-10!14;CL:0002321!3.98e-09!248;CL:0000220!1.10e-08!246 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.31e-12;24!CL:0000359;2.10e-10;32!CL:0000192;1.54e-09;43!CL:0000236;2.51e-09;13!CL:0000542;6.84e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.24e-13,43;CL:0000514,3.24e-13,43;CL:0000542,5.74e-12,53;CL:0000051,5.74e-12,53;CL:0000945,9.55e-12,24;CL:0000826,9.55e-12,24;CL:0000838,1.66e-11,52;CL:0000359,4.74e-11,32;CL:0000187,1.15e-10,55;CL:0000393,1.78e-10,61;CL:0000211,1.78e-10,61;CL:0000680,2.82e-10,58;CL:0000056,2.82e-10,58;CL:0000355,2.82e-10,58;CL:0000236,7.24e-10,14;CL:0002321,4.90e-09,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.54e-09;43!CL:0000051;6.84e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.79e-11!347;UBERON:0000475!7.37e-11!365;UBERON:0003104!8.77e-10!238;UBERON:0009142!8.77e-10!238;UBERON:0000914!9.35e-10!83;UBERON:0002329!9.35e-10!83;UBERON:0003077!9.35e-10!83;UBERON:0003059!9.35e-10!83;UBERON:0007282!9.35e-10!83;UBERON:0009618!9.35e-10!83;UBERON:0007285!9.35e-10!83;UBERON:0002100!2.25e-09!216;UBERON:0005256!3.61e-09!143;UBERON:0006554!1.02e-08!44;UBERON:0001008!1.20e-08!45;UBERON:0000486!2.12e-08!82;UBERON:0001134!3.78e-08!61;UBERON:0002036!3.78e-08!61;UBERON:0003082!3.78e-08!61;UBERON:0002385!9.34e-08!63;UBERON:0001015!9.34e-08!63;UBERON:0000383!9.34e-08!63;UBERON:0001444!9.83e-08!48;UBERON:0004290!1.13e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.29e-07;30!UBERON:0001008;1.29e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,9.80e-10,160;UBERON:0009142,9.80e-10,160;UBERON:0006554,4.89e-09,47;UBERON:0001008,5.70e-09,48;UBERON:0000486,1.75e-08,83;UBERON:0007503,2.05e-08,78;UBERON:0001134,3.16e-08,62;UBERON:0002036,3.16e-08,62;UBERON:0003082,3.16e-08,62;UBERON:0007524,5.43e-08,73;UBERON:0002100,6.23e-08,199;UBERON:0002385,7.78e-08,64;UBERON:0001015,7.78e-08,64;UBERON:0000383,7.78e-08,64;UBERON:0002329,9.36e-08,71;UBERON:0003059,9.36e-08,71;UBERON:0007282,9.36e-08,71;UBERON:0004290,9.36e-08,71;UBERON:0009618,9.36e-08,71;UBERON:0003077,1.16e-07,72;UBERON:0007285,1.16e-07,72;UBERON:0000033,2.03e-07,56;UBERON:0000153,2.18e-07,62;UBERON:0007811,2.18e-07,62;UBERON:0001444,3.51e-07,49 | |||
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| ||
|short_description=p1@BCAS4 | |short_description=p1@BCAS4 | ||
}} | }} |
Latest revision as of 22:30, 16 September 2015
Short description: | p1@BCAS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BCAS4_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 0bp_to_ENST00000445038, ENST00000463943_5end |
EntrezGene: | BCAS4 |
HGNC: | 14367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.24e-13 | 43 |
smooth muscle myoblast | 3.24e-13 | 43 |
lymphocyte | 5.74e-12 | 53 |
common lymphoid progenitor | 5.74e-12 | 53 |
lymphocyte of B lineage | 9.55e-12 | 24 |
pro-B cell | 9.55e-12 | 24 |
lymphoid lineage restricted progenitor cell | 1.66e-11 | 52 |
vascular associated smooth muscle cell | 4.74e-11 | 32 |
muscle cell | 1.15e-10 | 55 |
electrically responsive cell | 1.78e-10 | 61 |
electrically active cell | 1.78e-10 | 61 |
muscle precursor cell | 2.82e-10 | 58 |
myoblast | 2.82e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.82e-10 | 58 |
B cell | 7.24e-10 | 14 |
embryonic cell | 4.90e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 9.80e-10 | 160 |
entire embryonic mesenchyme | 9.80e-10 | 160 |
urinary system structure | 4.89e-09 | 47 |
renal system | 5.70e-09 | 48 |
multilaminar epithelium | 1.75e-08 | 83 |
epithelial vesicle | 2.05e-08 | 78 |
skeletal muscle tissue | 3.16e-08 | 62 |
striated muscle tissue | 3.16e-08 | 62 |
myotome | 3.16e-08 | 62 |
dense mesenchyme tissue | 5.43e-08 | 73 |
trunk | 6.23e-08 | 199 |
muscle tissue | 7.78e-08 | 64 |
musculature | 7.78e-08 | 64 |
musculature of body | 7.78e-08 | 64 |
somite | 9.36e-08 | 71 |
presomitic mesoderm | 9.36e-08 | 71 |
presumptive segmental plate | 9.36e-08 | 71 |
dermomyotome | 9.36e-08 | 71 |
trunk paraxial mesoderm | 9.36e-08 | 71 |
paraxial mesoderm | 1.16e-07 | 72 |
presumptive paraxial mesoderm | 1.16e-07 | 72 |
head | 2.03e-07 | 56 |
anterior region of body | 2.18e-07 | 62 |
craniocervical region | 2.18e-07 | 62 |
subdivision of head | 3.51e-07 | 49 |