FFCP PHASE1:Hg19::chr20:35177847..35177864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:35177847..35177864,+ | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35177847..35177864,+ | |description=CAGE_peak_at_chr20:35177847..35177864,+ | ||
|id=chr20:35177847..35177864,+ | |id=chr20:35177847..35177864,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.35e-15!180;CL:0000183!2.51e-10!59;CL:0000192!2.86e-10!42;CL:0000514!2.86e-10!42;CL:0000680!3.35e-10!57;CL:0000056!3.35e-10!57;CL:0000355!3.35e-10!57;CL:0000187!1.34e-09!54;CL:0000057!5.85e-09!75;CL:0000393!1.60e-08!60;CL:0000211!1.60e-08!60;CL:0000359!3.03e-08!32;CL:0000136!9.63e-08!15;CL:0002334!3.72e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.35e-15!180;CL:0000183!2.51e-10!59;CL:0000192!2.86e-10!42;CL:0000514!2.86e-10!42;CL:0000680!3.35e-10!57;CL:0000056!3.35e-10!57;CL:0000355!3.35e-10!57;CL:0000187!1.34e-09!54;CL:0000057!5.85e-09!75;CL:0000393!1.60e-08!60;CL:0000211!1.60e-08!60;CL:0000359!3.03e-08!32;CL:0000136!9.63e-08!15;CL:0002334!3.72e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.88e-09;13!CL:0002334;3.13e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.15e-10,15;CL:0002334,5.22e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!7.99e-12!143;UBERON:0004290!3.35e-11!70;UBERON:0000914!4.41e-11!83;UBERON:0002329!4.41e-11!83;UBERON:0003077!4.41e-11!83;UBERON:0003059!4.41e-11!83;UBERON:0007282!4.41e-11!83;UBERON:0009618!4.41e-11!83;UBERON:0007285!4.41e-11!83;UBERON:0002385!1.05e-10!63;UBERON:0001015!1.05e-10!63;UBERON:0000383!1.05e-10!63;UBERON:0000486!3.90e-10!82;UBERON:0002100!4.12e-10!216;UBERON:0001134!1.06e-09!61;UBERON:0002036!1.06e-09!61;UBERON:0003082!1.06e-09!61;UBERON:0003104!5.10e-08!238;UBERON:0009142!5.10e-08!238;UBERON:0000481!6.40e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.26e-09;6!UBERON:0002358;1.26e-09;6!UBERON:0003684;1.26e-09;6!UBERON:0001178;1.26e-09;6!UBERON:0003101;4.69e-08;22!UBERON:0000079;4.69e-08;22!UBERON:0005904;1.27e-07;4!UBERON:0003135;7.29e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.97e-09,6;UBERON:0002358,1.97e-09,6;UBERON:0003684,1.97e-09,6;UBERON:0001178,1.97e-09,6;UBERON:0003101,4.20e-08,22;UBERON:0000079,4.20e-08,22;UBERON:0005904,1.27e-07,4;UBERON:0003135,7.41e-07,11;UBERON:0003064,9.09e-07,28 | |||
|phase1_expression=2.18014055124668,4.06790995392868,2.25527046553554,6.00439790118782,8.04529969969118,4.36169262050184,22.796989035148,1.26343974685366,0,0.737201809504527,2.09340350391728,0,0.263766978228454,0,0,4.03395087871065,3.61616716814386,1.46062018077475,4.39139518911456,0,0,0.313454721478088,0,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,2.50668955317945,1.01392563272577,0,0.486634870302636,0,1.33037638477538,0.43917392846563,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,2.98183171017191,1.01304409331664,0.264818361626438,0,0.354668382198357,5.04609840128076,2.1349799145941,3.20667812942308,0,0.269421344139376,0,0,0,0,0.624320153660641,0.570471821544449,0.747243402759005,0,0,0.280901613404497,0.408308342509787,0.122834317311768,0.103325781175765,2.37600571456411,6.67620709052104,0.910161361938026,1.43723628363248,0,0,0.277064115484183,2.19488810440419,6.43624371177941,3.60571341375832,0.226864366320042,0.179389635688862,0.640672166455702,0.635795703478686,0.300091096084402,0.515262646192195,0.772921620136887,1.67505170698431,0,0.876933046450788,0.252433774244115,0.460249493211497,0.484938170456436,0,1.20902517873168,0.339121184620975,0,0.545492241181669,0,0.365921118388786,0.265059536642971,0.116193942869518,0.10366105501537,1.00928340350251,0,1.56449532329816,2.57296375277154,2.76269842704961,2.3218396401599,0.721879481669586,0.118306800039844,0.168584690078102,0.723033089650446,0.330881918197182,0.435758888184812,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0.738155454624648,0,0,4.41026134156626,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0.468008530278475,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0.22001485746285,0.646358578788889,0,0.845302752556,2.39344304926383,3.12022310734098,0.257207374262142,0,0,0.57191197463259,0,1.64648067356154,0,0.355391948742546,0.791951872933429,1.80863626235752,0.871533458600294,1.3996218765488,0,0,0,0.718874566474748,0,0,1.01346914667305,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,5.40724239980099,7.85087550707512,2.20783381047509,1.63997980989798,0.902838299183157,13.6444502433591,2.0694614258501,1.99267679560631,0.921845842708516,0.955719759148911,0.391602314925481,1.02943027143257,0,0,0,0,0,0,0.496215615637554,0.460385919864187,3.64858122762996,1.02511319404561,3.58195074346692,2.2519548960105,1.48418066444991,2.00472601943452,1.24293207719189,0.739144404124282,1.55776328755086,1.27831416305955,0.241718899183244,0.200506470303285,0,0.68888668898764,2.1850940160806,3.93373244878272,0,0,0.784349769176855,0,0,0,0.340187410553031,0.431831832204279,0,0,2.00675909541941,0,0.831076008928724,0.671624264166535,0,0,0,0.656029291399411,0.325378394664303,0.515205058238611,0,0,0,0.650060246036521,3.21367859688319,0.48335359146061,0.924291702687866,0,0.275673144969061,0.107420244868274,0.580066775656914,0.170453254832202,0.267096106940212,0,0.192190067365106,0,0.10115778085555,2.32422774648643,0.94443704049192,0.6970372701606,0,1.59691809095107,0,0.37064843820784,0.429374660225974,0,0.632758849437452,1.71567174531442,0.255897791311334,0.855877976067841,0,1.56989728039846,0.719489830333259,0.54907405947211,0.471249609382746,1.41527737101321,0,1.26377536871694,0.48763373908959,0.731140468893853,1.05650146756755,1.50149902548784,1.69686518344455,1.13008116620243,0,2.65375590096488,2.63070531152258,0,0.655894752046633,0.811641507850816,1.54911749049875,0.281695602532241,0.286822704408103,0.687743287091848,0.7133421029625,0.709522128141196,0.844430541190656,0.329294892959902,0,0.349934720244983,0,0,0,0.376575203107117,1.72202149068492,0,0,0,1.01489521846434,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,1.17206543417515,0.728163130497081,0,0,0,0,0,0,0.140669416410513,0,0,0,5.37969568277888,1.93398740871803,0,0,0,2.79935628895627,0,0,0,9.66705375241949,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,2.07765697960252,0.227884111694002,0,0.0897576444097721,0,0,1.55715908783166,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,2.0345239835768,4.888241159469,0,0,0,0.067401132980677,0,0,0,0,0,4.73501283419269,2.41981432097328,0,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0,0,3.84398670132466,0,0,0,0,6.30428607174726,0,1.12990370390266,0.137041924646751,0,0,0,0,7.25740182113799,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,3.86788897277961,0,2.79282401272254,2.97908551215189,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| ||
|short_description=p@chr20:35177847..35177864,+ | |short_description=p@chr20:35177847..35177864,+ | ||
}} | }} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35177847..35177864, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35177847..35177864, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.15e-10 | 15 |
preadipocyte | 5.22e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.97e-09 | 6 |
peritoneum | 1.97e-09 | 6 |
abdominal cavity | 1.97e-09 | 6 |
visceral peritoneum | 1.97e-09 | 6 |
male organism | 4.20e-08 | 22 |
male reproductive system | 4.20e-08 | 22 |
duct of male reproductive system | 1.27e-07 | 4 |
male reproductive organ | 7.41e-07 | 11 |
intermediate mesoderm | 9.09e-07 | 28 |