FFCP PHASE1:Hg19::chr11:68049932..68049949,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:68049932..68049949,+
|short_description=p@chr11:68049932..68049949,+
|description=CAGE_peak_at_chr11:68049932..68049949,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:68049932..68049949,+ | |||
|coexpression_cluster_id=C104 | |||
|description=CAGE_peak_at_chr11:68049932..68049949,+ | |||
|id=chr11:68049932..68049949,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.55e-16!172;CL:0000566!2.55e-16!172;CL:0002032!5.61e-16!165;CL:0000837!5.61e-16!165;CL:0000988!4.97e-15!182;CL:0002274!1.69e-14!5;CL:0000457!1.69e-14!5;CL:0002191!1.69e-14!5;CL:0000097!1.69e-14!5;CL:0000831!1.69e-14!5;CL:0002028!1.69e-14!5;CL:0000763!6.89e-13!112;CL:0000049!6.89e-13!112;CL:0000738!1.44e-10!140;CL:0002031!4.77e-09!124;CL:0000163!4.61e-08!9;CL:0000766!6.36e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.89e-36;5!CL:0000946;8.53e-21;1!CL:0000786;8.53e-21;1!CL:0000163;1.28e-20;9!CL:0000860;1.31e-09;33!CL:0002057;1.31e-09;33!CL:0000151;8.71e-09;36!CL:0000766;7.04e-08;69!CL:0000473;6.13e-07;39!CL:0000234;6.13e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.78e-36,5;CL:0002028,1.78e-36,5;CL:0000946,7.72e-21,1;CL:0000786,7.72e-21,1;CL:0000980,7.72e-21,1;CL:0000163,1.24e-20,9;CL:0002031,5.91e-16,120;CL:0000839,2.61e-14,66;CL:0000557,4.27e-14,67;CL:0000738,4.83e-14,136;CL:0000766,4.08e-13,72;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000785,4.09e-11,2;CL:0000955,4.09e-11,2;CL:0000818,4.09e-11,2;CL:0000954,4.09e-11,2;CL:0000816,4.09e-11,2;CL:0000988,1.07e-10,177;CL:0000151,3.27e-09,36;CL:0000763,1.07e-08,108;CL:0000049,1.07e-08,108;CL:0002087,4.13e-08,115;CL:0000860,6.72e-08,42;CL:0002057,6.72e-08,42;CL:0000817,7.76e-08,3;CL:0000473,6.02e-07,48;CL:0000234,6.02e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000954;4.30e-11;2!CL:0002057;5.44e-08;42 | |||
|ontology_enrichment_disease=DOID:2531!1.25e-07!51;DOID:0060083!1.25e-07!51;DOID:8692!3.07e-07!31;DOID:1240!6.59e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:630;4.67e-21;1!DOID:0050177;4.67e-21;1!DOID:0050427;4.67e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.31e-21,1;DOID:0050177,6.31e-21,1;DOID:0050427,6.31e-21,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.01e-12,76;UBERON:0001474,1.66e-11,82;UBERON:0004765,1.79e-10,90;UBERON:0002405,3.95e-10,93;UBERON:0002390,1.33e-09,98;UBERON:0003061,1.33e-09,98;UBERON:0001434,2.08e-09,100;UBERON:0002193,1.07e-08,108 | |||
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| ||
|short_description=p@chr11:68049932..68049949,+ | |||
}} | }} |
Latest revision as of 01:50, 24 July 2015
Short description: | p@chr11:68049932..68049949, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:68049932..68049949, + |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.78e-36 | 5 |
basophil mast progenitor cell | 1.78e-36 | 5 |
antibody secreting cell | 7.72e-21 | 1 |
plasma cell | 7.72e-21 | 1 |
plasmablast | 7.72e-21 | 1 |
endocrine cell | 1.24e-20 | 9 |
hematopoietic lineage restricted progenitor cell | 5.91e-16 | 120 |
myeloid lineage restricted progenitor cell | 2.61e-14 | 66 |
granulocyte monocyte progenitor cell | 4.27e-14 | 67 |
leukocyte | 4.83e-14 | 136 |
myeloid leukocyte | 4.08e-13 | 72 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
mature B cell | 4.09e-11 | 2 |
pre-B-II cell | 4.09e-11 | 2 |
transitional stage B cell | 4.09e-11 | 2 |
small pre-B-II cell | 4.09e-11 | 2 |
immature B cell | 4.09e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
secretory cell | 3.27e-09 | 36 |
myeloid cell | 1.07e-08 | 108 |
common myeloid progenitor | 1.07e-08 | 108 |
nongranular leukocyte | 4.13e-08 | 115 |
classical monocyte | 6.72e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.72e-08 | 42 |
precursor B cell | 7.76e-08 | 3 |
defensive cell | 6.02e-07 | 48 |
phagocyte | 6.02e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.01e-12 | 76 |
bone element | 1.66e-11 | 82 |
skeletal element | 1.79e-10 | 90 |
immune system | 3.95e-10 | 93 |
hematopoietic system | 1.33e-09 | 98 |
blood island | 1.33e-09 | 98 |
skeletal system | 2.08e-09 | 100 |
hemolymphoid system | 1.07e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.31e-21 | 1 |
monogenic disease | 6.31e-21 | 1 |
xeroderma pigmentosum | 6.31e-21 | 1 |