FFCP PHASE1:Hg19::chr20:33815160..33815166,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:33815160..33815166,- | |||
|coexpression_cluster_id=C586 | |||
|description=CAGE_peak_at_chr20:33815160..33815166,- | |description=CAGE_peak_at_chr20:33815160..33815166,- | ||
|id=chr20:33815160..33815166,- | |id=chr20:33815160..33815166,- | ||
|ontology_enrichment_celltype=CL:1000415!5.74e-08!2 | |ontology_enrichment_celltype=CL:1000415!5.74e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.27e-34;3!UBERON:0006238;2.37e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.41e-26!57;UBERON:0005068!2.41e-26!57;UBERON:0006241!2.41e-26!57;UBERON:0007135!2.41e-26!57;UBERON:0000955!1.57e-25!69;UBERON:0006238!1.57e-25!69;UBERON:0002616!1.99e-25!59;UBERON:0000073!1.12e-21!94;UBERON:0001016!1.12e-21!94;UBERON:0001017!2.20e-21!82;UBERON:0005743!2.36e-20!86;UBERON:0000988!2.53e-18!3;UBERON:0004733!5.09e-18!12;UBERON:0002028!5.09e-18!12;UBERON:0007277!5.09e-18!12;UBERON:0003075!3.59e-17!86;UBERON:0007284!3.59e-17!86;UBERON:0004732!1.16e-16!13;UBERON:0002346!2.31e-16!90;UBERON:0002298!1.90e-15!8;UBERON:0007023!3.41e-15!115;UBERON:0002780!6.55e-15!41;UBERON:0001890!6.55e-15!41;UBERON:0006240!6.55e-15!41;UBERON:0003080!1.50e-14!42;UBERON:0003076!1.76e-14!15;UBERON:0003057!1.76e-14!15;UBERON:0000033!6.28e-14!123;UBERON:0002680!7.36e-14!9;UBERON:0001895!7.36e-14!9;UBERON:0010092!7.36e-14!9;UBERON:0002020!2.61e-13!34;UBERON:0003528!2.61e-13!34;UBERON:0000153!3.16e-13!129;UBERON:0007811!3.16e-13!129;UBERON:0000349!1.28e-11!5;UBERON:0004121!1.38e-11!169;UBERON:0000924!2.74e-11!173;UBERON:0006601!2.74e-11!173;UBERON:0001869!5.13e-10!32;UBERON:0003056!6.28e-10!61;UBERON:0002791!1.01e-09!33;UBERON:0001893!1.93e-09!34;UBERON:0002619!1.93e-09!22;UBERON:0001894!1.59e-08!7;UBERON:0006222!1.59e-08!7;UBERON:0000025!2.20e-08!194;UBERON:0000956!2.24e-08!25;UBERON:0000203!2.24e-08!25;UBERON:0001873!4.09e-08!2;UBERON:0010122!4.09e-08!2;UBERON:0001905!4.69e-08!2;UBERON:0002757!4.69e-08!2;UBERON:0010134!4.69e-08!2;UBERON:0002784!4.69e-08!2;UBERON:0005408!4.69e-08!2;UBERON:0001899!4.69e-08!2;UBERON:0001954!5.02e-08!2;UBERON:0003022!5.02e-08!2;UBERON:0002421!5.02e-08!2;UBERON:0002600!5.02e-08!2;UBERON:0001876!6.15e-08!2;UBERON:0002148!7.03e-08!2;UBERON:0009662!7.03e-08!2;UBERON:0001897!7.52e-08!2;UBERON:0004111!9.77e-08!241;UBERON:0001871!1.54e-07!7;UBERON:0002420!7.00e-07!9;UBERON:0007245!7.00e-07!9;UBERON:0010009!7.00e-07!9;UBERON:0010011!7.00e-07!9;UBERON:0000454!7.00e-07!9;UBERON:0002308!7.42e-07!9;UBERON:0000125!7.42e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;7.67e-18;6!UBERON:0002680;2.19e-12;9!UBERON:0001895;2.19e-12;9!UBERON:0004733;1.22e-09;12!UBERON:0002028;1.22e-09;12!UBERON:0004732;5.28e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.67e-18,6;UBERON:0006215,7.67e-18,6;UBERON:0002680,2.19e-12,9;UBERON:0001895,2.19e-12,9;UBERON:0010092,2.19e-12,9;UBERON:0004733,1.22e-09,12;UBERON:0002028,1.22e-09,12;UBERON:0007277,1.22e-09,12;UBERON:0004732,5.28e-09,13;UBERON:0003076,5.55e-08,15;UBERON:0003057,5.55e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr20:33815160..33815166,- | |short_description=p@chr20:33815160..33815166,- | ||
}} | }} |
Latest revision as of 13:22, 28 July 2015
Short description: | p@chr20:33815160..33815166, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33815160..33815166, - |
Coexpression cluster: | C586_cerebellum_brain_occipital_middle_parietal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.67e-18 | 6 |
rhombic lip | 7.67e-18 | 6 |
regional part of metencephalon | 2.19e-12 | 9 |
metencephalon | 2.19e-12 | 9 |
future metencephalon | 2.19e-12 | 9 |
segmental subdivision of hindbrain | 1.22e-09 | 12 |
hindbrain | 1.22e-09 | 12 |
presumptive hindbrain | 1.22e-09 | 12 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |