FFCP PHASE1:Hg19::chr20:3184528..3184549,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:3184528..3184549,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr20:3184528..3184549,- | |description=CAGE_peak_at_chr20:3184528..3184549,- | ||
|id=chr20:3184528..3184549,- | |id=chr20:3184528..3184549,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.03e-10;1!CL:0000164;1.03e-10;1!CL:0000502;1.03e-10;1!CL:0000172;1.03e-10;1!CL:0002553;1.03e-10;1!CL:0000173;1.03e-10;1!CL:1001319;2.50e-10;1!CL:1000600;2.50e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.84e-11,1;CL:0000164,9.84e-11,1;CL:0000502,9.84e-11,1;CL:0000172,9.84e-11,1;CL:0000173,9.84e-11,1;CL:0002351,9.84e-11,1;CL:0002553,1.19e-10,1;CL:1001319,1.57e-10,1;CL:1000600,1.57e-10,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.03e-10;1 | |||
|ontology_enrichment_disease=DOID:305!2.74e-15!106;DOID:0050687!1.67e-11!143;DOID:162!1.23e-08!235;DOID:14566!2.82e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:3119;9.67e-11;14!DOID:4430;1.03e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,9.08e-11,14;DOID:4430,9.84e-11,1;DOID:305,4.02e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-14!115;UBERON:0001049!3.75e-11!57;UBERON:0005068!3.75e-11!57;UBERON:0006241!3.75e-11!57;UBERON:0007135!3.75e-11!57;UBERON:0002780!7.80e-11!41;UBERON:0001890!7.80e-11!41;UBERON:0006240!7.80e-11!41;UBERON:0003080!2.30e-10!42;UBERON:0001869!3.28e-09!32;UBERON:0002020!3.60e-09!34;UBERON:0003528!3.60e-09!34;UBERON:0000955!5.56e-09!69;UBERON:0006238!5.56e-09!69;UBERON:0001893!5.94e-09!34;UBERON:0002616!8.42e-09!59;UBERON:0001017!9.56e-09!82;UBERON:0002791!1.79e-08!33;UBERON:0005743!3.21e-08!86;UBERON:0000073!9.96e-08!94;UBERON:0001016!9.96e-08!94;UBERON:0001737!1.38e-07!9;UBERON:0003075!1.88e-07!86;UBERON:0007284!1.88e-07!86;UBERON:0004121!5.41e-07!169;UBERON:0004921!6.03e-07!129;UBERON:0004185!6.03e-07!129;UBERON:0001007!6.21e-07!155;UBERON:0001555!6.21e-07!155;UBERON:0007026!6.21e-07!155;UBERON:0004119!6.37e-07!169;UBERON:0000925!6.37e-07!169;UBERON:0006595!6.37e-07!169;UBERON:0002619!7.01e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.50e-10;1!UBERON:0004913;2.50e-10;1!UBERON:0003703;2.50e-10;1!UBERON:0001256;2.50e-10;1!UBERON:0001259;2.50e-10;1!UBERON:0001174;2.50e-10;1!UBERON:0004914;2.50e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.30e-10,1;UBERON:0003703,1.30e-10,1;UBERON:0001174,1.30e-10,1;UBERON:0004914,1.30e-10,1;UBERON:0004645,1.57e-10,1;UBERON:0001256,1.57e-10,1;UBERON:0001259,1.57e-10,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0.473554504088034,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0.600182192168805,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.591534000199219,0.674338760312407,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.539325232640658,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0.593929361665277,0,0.994147647766298,0.562677665642051,0,0.988823245360557,0.211125408127993,0.19924798825107,0.276283915531148,0.755798243562828,0,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0.969332746095218,0.185536196323703,0,0.520855522170466,0.174919999992391,0,0.341380344856499,0,0,0,0,0.347249989866585,0,1.20596438625408,0,0.552896299656123,0.591095237907095,0.438770794307945,0.653630781113941,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,1.02193298195737,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0.216388639742091,0.995261931078505,0.0884575645033392,0,0.593042257361244,0.370691816839509,0.417687798021821,0.067401132980677,0,0.234264445725339,0,0,0.728341138602278,0,1.20990716048664,0,0.063186579628488,3.90840890477681,0.207376382794494,0,0,0,1.19472429772959,0,0,0,0.685946781900644,0.0870592065804026,0,0,0,0.292357268344742,0.0821154570532092,0.0969890164884194,0.176512253383001,0,0,0,0.253243183823515,0.782205530939212,0,0,0,0.144090417154106,0.114536596165916,1.02956998717179,0,0.248505071130865,0,0,0,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0.472699093843342,0.741742725430498,0.471824806979294,0,0.169346664131569,0.795229689809303,0.136203406111576,0,0.412618309791701,0,0.449947783103001,0,0.485996453264197,0.335434687599266,0.157611414598396,0.0524545881349981,0,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.517131825446202,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0.395223263795889,0,0,0,0,0,0,0.157054096250234,0,0,0.3755727921195,0,0,0.124192805882767,0,0.124980407962107,0.151649117541648,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0.260994291965212,0,0.463044948647668,0.734210113519403,0,0,0,0.176689145945881,0.771656153083659,0.337884881306145,0,0.345430341731199,0.303859956177382,0.276516872303462,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.139879507719444,0,0,0.323474434190045,0.157265941855896,0,0,0,0,0,0,0,2.40171224485641,0,0,0.642292250964595,0,0.159633859057151,0.41023272848151,0,0.276629009856872,0.322951291263702,0,0.196295437002051,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0.327543835020193,1.47856086217045,0.270150338473579,0,0.620060389503552,0.253663240775627,0,0.548257766857182,0,0,0,0.535701835878287,0,1.21393120847326,0.227662191351298,0,0.115233987555779,0.171488009437418,0.135939465953663,0.263091094251396,0,0.333694205676207,0,0.471346769748006,0.280272163313789,0,0,0,0.0714765441766563,1.10609528212909,0.116241425368125,0,0,0.207216164163037,0.17071847709395,0,0.860454717640555,0,0.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| ||
|short_description=p@chr20:3184528..3184549,- | |short_description=p@chr20:3184528..3184549,- | ||
}} | }} |
Latest revision as of 13:06, 28 July 2015
Short description: | p@chr20:3184528..3184549, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:3184528..3184549, - |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.84e-11 | 1 |
enteroendocrine cell | 9.84e-11 | 1 |
type D enteroendocrine cell | 9.84e-11 | 1 |
somatostatin secreting cell | 9.84e-11 | 1 |
pancreatic D cell | 9.84e-11 | 1 |
progenitor cell of endocrine pancreas | 9.84e-11 | 1 |
lung fibroblast | 1.19e-10 | 1 |
bladder cell | 1.57e-10 | 1 |
lower urinary tract cell | 1.57e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.30e-10 | 1 |
extrahepatic bile duct | 1.30e-10 | 1 |
common bile duct | 1.30e-10 | 1 |
duodenal papilla | 1.30e-10 | 1 |
urinary bladder urothelium | 1.57e-10 | 1 |
wall of urinary bladder | 1.57e-10 | 1 |
mucosa of urinary bladder | 1.57e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 9.08e-11 | 14 |
somatostatinoma | 9.84e-11 | 1 |
carcinoma | 4.02e-07 | 106 |