FFCP PHASE1:Hg19::chr20:29463016..29463024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:29463016..29463024,+ | |||
|coexpression_cluster_id=C110 | |||
|description=CAGE_peak_at_chr20:29463016..29463024,+ | |description=CAGE_peak_at_chr20:29463016..29463024,+ | ||
|id=chr20:29463016..29463024,+ | |id=chr20:29463016..29463024,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.18e-19!5;CL:0000457!2.18e-19!5;CL:0002191!2.18e-19!5;CL:0000097!2.18e-19!5;CL:0000831!2.18e-19!5;CL:0002028!2.18e-19!5;CL:0000763!8.60e-19!112;CL:0000049!8.60e-19!112;CL:0002032!5.47e-14!165;CL:0000837!5.47e-14!165;CL:0000037!2.50e-13!172;CL:0000566!2.50e-13!172;CL:0000988!1.80e-12!182;CL:0000163!4.85e-11!9 | |ontology_enrichment_celltype=CL:0002274!2.18e-19!5;CL:0000457!2.18e-19!5;CL:0002191!2.18e-19!5;CL:0000097!2.18e-19!5;CL:0000831!2.18e-19!5;CL:0002028!2.18e-19!5;CL:0000763!8.60e-19!112;CL:0000049!8.60e-19!112;CL:0002032!5.47e-14!165;CL:0000837!5.47e-14!165;CL:0000037!2.50e-13!172;CL:0000566!2.50e-13!172;CL:0000988!1.80e-12!182;CL:0000163!4.85e-11!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.72e-14;5!CL:0000763;5.91e-09;100!CL:0000163;3.55e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.08e-14,108;CL:0000049,2.08e-14,108;CL:0000097,5.72e-14,5;CL:0002028,5.72e-14,5;CL:0002032,1.59e-11,161;CL:0000837,1.59e-11,161;CL:0000037,5.20e-11,168;CL:0000988,2.09e-10,177;CL:0000163,3.55e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!4.01e-47!31;DOID:1036!9.73e-47!8;DOID:1240!9.01e-44!39;DOID:2531!4.64e-33!51;DOID:0060083!4.64e-33!51;DOID:8552!3.27e-12!1;DOID:0050686!5.07e-11!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.40e-31;31!DOID:1240;6.60e-26;39!DOID:1036;1.94e-19;8!DOID:8552;4.08e-18;1!DOID:2531;1.44e-16;51!DOID:0060083;1.44e-16;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.65e-34,39;DOID:8692,1.07e-33,31;DOID:2531,1.02e-25,51;DOID:0060083,1.02e-25,51;DOID:1036,1.88e-19,8;DOID:8552,3.75e-18,1;DOID:0050686,4.50e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0001282!7.76e-12!1;UBERON:0009842!7.76e-12!1;UBERON:0003704!7.76e-12!1;UBERON:0001171!7.76e-12!1;UBERON:0001172!7.76e-12!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.44e-17;1!UBERON:0009842;1.44e-17;1!UBERON:0003704;1.44e-17;1!UBERON:0001171;1.44e-17;1!UBERON:0001172;1.44e-17;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.44e-17,1;UBERON:0009842,1.44e-17,1;UBERON:0003704,1.44e-17,1;UBERON:0001171,1.44e-17,1;UBERON:0001172,1.44e-17,1 | |||
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|short_description=p@chr20:29463016..29463024,+ | |short_description=p@chr20:29463016..29463024,+ | ||
}} | }} |
Latest revision as of 12:47, 28 July 2015
Short description: | p@chr20:29463016..29463024, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:29463016..29463024, + |
Coexpression cluster: | C110_leukemia_chronic_Eosinophils_acute_Whole_CD34_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.08e-14 | 108 |
common myeloid progenitor | 2.08e-14 | 108 |
mast cell | 5.72e-14 | 5 |
basophil mast progenitor cell | 5.72e-14 | 5 |
hematopoietic oligopotent progenitor cell | 1.59e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-11 | 161 |
hematopoietic stem cell | 5.20e-11 | 168 |
hematopoietic cell | 2.09e-10 | 177 |
endocrine cell | 3.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.44e-17 | 1 |
acinus | 1.44e-17 | 1 |
intrahepatic bile duct | 1.44e-17 | 1 |
portal lobule | 1.44e-17 | 1 |
hepatic acinus | 1.44e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.65e-34 | 39 |
myeloid leukemia | 1.07e-33 | 31 |
hematologic cancer | 1.02e-25 | 51 |
immune system cancer | 1.02e-25 | 51 |
chronic leukemia | 1.88e-19 | 8 |
chronic myeloid leukemia | 3.75e-18 | 1 |
organ system cancer | 4.50e-09 | 137 |