FFCP PHASE1:Hg19::chr16:70835017..70835028,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55697 | |EntrezGene=55697 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25507 | |HGNC=25507 | ||
|TSSclassifier=strong | |||
|UniProt=Q08AM6,Q9NTB8 | |UniProt=Q08AM6,Q9NTB8 | ||
|association_with_transcript=32bp_to_NM_018052,uc002ezm.2,uc002ezn.2,uc010cfw.2_5end | |association_with_transcript=32bp_to_NM_018052,uc002ezm.2,uc002ezn.2,uc010cfw.2_5end | ||
|cluster_id=chr16:70835017..70835028,- | |||
|description=CAGE_peak_3_at_VAC14_5end | |description=CAGE_peak_3_at_VAC14_5end | ||
|id=chr16:70835017..70835028,- | |id=chr16:70835017..70835028,- | ||
|ontology_enrichment_celltype=CL:0000557!7.45e-21!71;CL:0000839!3.96e-20!70;CL:0002009!2.31e-18!65;CL:0002194!1.49e-17!63;CL:0000576!1.49e-17!63;CL:0000040!1.49e-17!63;CL:0000559!1.49e-17!63;CL:0000766!1.13e-16!76;CL:0002057!1.86e-12!42;CL:0000860!2.17e-12!45;CL:0002031!2.93e-10!124;CL:0000763!3.51e-10!112;CL:0000049!3.51e-10!112;CL:0002087!7.61e-08!119;CL:0000048!9.50e-08!430;CL:0000034!1.18e-07!444;CL:0000738!1.49e-07!140;CL:0000723!2.06e-07!436;CL:0000144!9.99e-07!625 | |ontology_enrichment_celltype=CL:0000557!7.45e-21!71;CL:0000839!3.96e-20!70;CL:0002009!2.31e-18!65;CL:0002194!1.49e-17!63;CL:0000576!1.49e-17!63;CL:0000040!1.49e-17!63;CL:0000559!1.49e-17!63;CL:0000766!1.13e-16!76;CL:0002057!1.86e-12!42;CL:0000860!2.17e-12!45;CL:0002031!2.93e-10!124;CL:0000763!3.51e-10!112;CL:0000049!3.51e-10!112;CL:0002087!7.61e-08!119;CL:0000048!9.50e-08!430;CL:0000034!1.18e-07!444;CL:0000738!1.49e-07!140;CL:0000723!2.06e-07!436;CL:0000144!9.99e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.70e-30;39!CL:0000234;3.70e-30;39!CL:0000860;1.07e-22;33!CL:0002057;1.07e-22;33!CL:0000235;4.87e-18;6!CL:0000766;1.03e-16;69!CL:0000576;1.21e-15;48!CL:0000097;5.30e-14;5!CL:0002619;1.23e-09;3!CL:0000163;1.32e-07;9!CL:0000763;7.17e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.69e-45,66;CL:0000557,1.12e-44,67;CL:0000766,6.46e-41,72;CL:0002194,4.22e-37,59;CL:0000576,4.22e-37,59;CL:0000040,4.22e-37,59;CL:0000559,4.22e-37,59;CL:0002009,1.28e-35,61;CL:0000473,1.67e-29,48;CL:0000234,1.67e-29,48;CL:0000763,4.42e-24,108;CL:0000049,4.42e-24,108;CL:0002031,1.73e-23,120;CL:0000738,1.49e-19,136;CL:0000860,2.77e-18,42;CL:0002057,2.77e-18,42;CL:0000235,5.16e-18,6;CL:0002087,1.91e-17,115;CL:0002032,5.34e-15,161;CL:0000837,5.34e-15,161;CL:0000097,2.01e-14,5;CL:0002028,2.01e-14,5;CL:0000037,5.66e-14,168;CL:0000988,8.85e-13,177;CL:0000048,9.88e-13,427;CL:0000723,2.40e-12,433;CL:0000034,7.55e-12,441;CL:0000219,9.89e-12,386;CL:0000134,3.09e-11,354;CL:0002320,9.22e-11,361;CL:0002619,1.34e-09,3;CL:0000163,7.95e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-15;42!CL:0000049;5.84e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-20!80;UBERON:0001474!3.30e-18!86;UBERON:0002405!4.19e-16!115;UBERON:0002390!3.05e-14!102;UBERON:0003061!3.05e-14!102;UBERON:0002193!9.93e-14!112;UBERON:0002204!1.24e-13!167;UBERON:0004765!2.84e-13!101;UBERON:0001434!2.84e-13!101;UBERON:0003081!3.82e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.23e-40,76;UBERON:0001474,6.05e-37,82;UBERON:0002405,1.97e-35,93;UBERON:0004765,8.73e-33,90;UBERON:0002390,2.64e-29,98;UBERON:0003061,2.64e-29,98;UBERON:0002193,4.49e-29,108;UBERON:0001434,1.60e-28,100;UBERON:0002204,8.35e-21,167;UBERON:0003081,1.12e-20,203;UBERON:0000926,5.78e-15,315;UBERON:0004120,5.78e-15,315;UBERON:0006603,5.78e-15,315;UBERON:0002384,4.07e-10,371 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0,0,2.01697543935533,0,0.730310090387373,1.46379839637152,0,0.204000691244253,0.626909442956176,0.286235987131057,0.273748850145768,0,0.229240217243854,0,0.0787107813136792,0,0,0.464448369948228,0,0,0.369754010166788,0.697204805222715,0.568676929949686,0.293600439334847,0,0.200544447470142,0.434021741431704,2.23915474239924,5.18229865630367,2.31818010870768,0.145398238779565,1.51150377475524,1.21292030593908,1.39457422143411,2.46700732813095,2.78735733805593,1.1507695692886,1.2808035326455,0,0.689491361473237,3.87290810150296,4.06279459783025,0.752969358170419,1.36453075028923,2.02251136000576,0.918251677112708,1.60464513538047,0,0.329851300186716,0.598390972864896,0.852449501065388,1.16083695451434,2.26954089876456,1.24564449799115,0.75374599577023,1.0429658368404,1.52032191293582,0.605399502633369,2.57794345191295,1.26584954976354,0.211255286311942,0.212604299965044,0,0.22465726229299,0.450530678524519,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,0,0.263384084775077,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0.12786256184353,0,1.00267582127178,0,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0.196468613246569,0.364295288292542,0.370784442784429,7.7891374477124,7.31344896656922,6.51494006542439,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.775250277507987,1.77883131343355,1.33888245105868,0,0,0,0.367663080345869,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,3.04541115870403,0,0,0,0,1.72667283892012,0,0.134710672069688,0,0,0,0.234321431833797,0,1.1409436430889,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0.168776332241266,0,0.504867548488229,0,0,0,0.10075209822764,0.169560592310488,0.386521706326594,0.272746120590835,0,0.365921118388786,0.132529768321485,0,0.207322110030741,0.756962552626885,0.72995471815166,0,0,0,0,0.721879481669586,0.473227200159376,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0.109750285408626,0,0,0,0.651616610620649,0,0,0,0.469634776943287,0.288732895522148,0,0,0,0.858486162094873,7.38651018262192,5.38209809820247,6.24250881612659,0,0,0.141775097242386,0.179117045405697,0,0.383382679165211,1.97065295158377,2.81754988842323,1.86595303986695,2.01767934783746,4.03975786964416,0.507983154337352,0.763976851116555,1.17217447210047,1.71072446022705,0.102827492703324,2.40274446275134,0,0.224262168690721,0.43596006883328,0,2.71470603091333,0,0,2.12750493267896,2.08014873822732,0.257207374262142,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0.099972991182057,2.43247561282381,3.51579964002488,2.10833939483032,0.239624855491583,0,1.42636905040718,0.434343920002738,0.205476322550383,0.537182889719687,0,0,0,0.256686072559497,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0.300946099727719,4.5481500811197,0,0.664225598535437,0.553107505625109,0.173767228936166,0.783204629850962,0.343143423810856,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.462629081407967,0.532685175939381,0,0.519254429183621,0.464841513839837,0,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0.451199612907412,0,0,0,0.105551628892876,1.13733384070897,0,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0.219259876645935,0,0,0.328014645699706,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.145016693914229,0.511359764496605,0.0890320356467374,0.330569830721956,0.768760269460425,0.765676274967505,1.31505115112215,0.929691098594572,0.62962469366128,0,0,0,1.73986598415015,0.9266210955196,0,0.744316738719335,0.632758849437452,1.14378116354295,0.255897791311334,0.855877976067841,0,0,0.719489830333259,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0,0,0,0.272999822815972,0.282810863907425,1.13008116620243,0.551365343546124,0,0.438450885253763,1.73632660280006,0,0.608731130888112,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0,0.159426272728822,0,0.383010740264733,0,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0,0.23874448473769,0,0.307160702099232,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0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| ||
|short_description=p3@VAC14 | |short_description=p3@VAC14 | ||
}} | }} |
Latest revision as of 17:10, 17 September 2015
Short description: | p3@VAC14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VAC14_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_NM_018052, uc002ezm.2, uc002ezn.2, uc010cfw.2_5end |
EntrezGene: | VAC14 |
HGNC: | 25507 |
UniProt: | Q08AM6Q9NTB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.23e-40 | 76 |
bone element | 6.05e-37 | 82 |
immune system | 1.97e-35 | 93 |
skeletal element | 8.73e-33 | 90 |
hematopoietic system | 2.64e-29 | 98 |
blood island | 2.64e-29 | 98 |
hemolymphoid system | 4.49e-29 | 108 |
skeletal system | 1.60e-28 | 100 |
musculoskeletal system | 8.35e-21 | 167 |
lateral plate mesoderm | 1.12e-20 | 203 |
mesoderm | 5.78e-15 | 315 |
mesoderm-derived structure | 5.78e-15 | 315 |
presumptive mesoderm | 5.78e-15 | 315 |
connective tissue | 4.07e-10 | 371 |